RNA–Protein interactions for RNA: ENST00000524201.1

NKAIN3-204, Transcript of sodium/potassium transporting ATPase interacting 3, humanhuman

TSL 3

Gene NKAIN3, Length 414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKAIN3-204ENST00000524201 NISCHQ9Y2I1 1504 aa49.92■■■■■ 5.58
NKAIN3-204ENST00000524201 ABCC9O60706 1549 aa44.85■■■■■ 4.77
NKAIN3-204ENST00000524201 CCDC180Q9P1Z9 1646 aa44.76■■■■■ 4.76
NKAIN3-204ENST00000524201 RB1CC1Q8TDY2 1594 aa42.65■■■■■ 4.42
NKAIN3-204ENST00000524201 NACADO15069 1562 aa42.37■■■■■ 4.37
NKAIN3-204ENST00000524201 DNAJC5BQ9UF47 199 aa42.22■■■■■ 4.35
NKAIN3-204ENST00000524201 DCAF8L2P0C7V8 631 aa42.07■■■■■ 4.33
NKAIN3-204ENST00000524201 MYO15BQ96JP2 1530 aa41.82■■■■■ 4.29
NKAIN3-204ENST00000524201 PABPN1Q86U42 306 aaKnown RBP eCLIP41.77■■■■■ 4.28
NKAIN3-204ENST00000524201 UNC13AQ9UPW8 1703 aa41.66■■■■■ 4.26
NKAIN3-204ENST00000524201 BICRAQ9NZM4 1560 aa41.47■■■■■ 4.23
NKAIN3-204ENST00000524201 ZCCHC6Q5VYS8 1495 aaKnown RBP41.36■■■■■ 4.21
NKAIN3-204ENST00000524201 DCAF1Q9Y4B6 1507 aa41.25■■■■■ 4.19
NKAIN3-204ENST00000524201 SHROOM4Q9ULL8 1493 aa40.9■■■■■ 4.14
NKAIN3-204ENST00000524201 SCRIBQ14160 1630 aa40.77■■■■■ 4.12
NKAIN3-204ENST00000524201 CC2D2AQ9P2K1 1620 aa40.51■■■■■ 4.08
NKAIN3-204ENST00000524201 EIF4G1Q04637 1599 aaKnown RBP40.43■■■■■ 4.06
NKAIN3-204ENST00000524201 CECR2Q9BXF3 1484 aa40.42■■■■■ 4.06
NKAIN3-204ENST00000524201 NCAPD3P42695 1498 aa39.17■■■■□ 3.86
NKAIN3-204ENST00000524201 ATAD2BQ9ULI0 1458 aa39.03■■■■□ 3.84
NKAIN3-204ENST00000524201 SMARCA4P51532 1647 aa38.92■■■■□ 3.82
NKAIN3-204ENST00000524201 SMARCA2P51531 1590 aa38.86■■■■□ 3.81
NKAIN3-204ENST00000524201 HMGXB3Q12766 1538 aa38.83■■■■□ 3.81
NKAIN3-204ENST00000524201 DNAJC5Q9H3Z4 198 aa38.78■■■■□ 3.8
NKAIN3-204ENST00000524201 BAZ1AQ9NRL2 1556 aaPredicted RBP38.72■■■■□ 3.79
NKAIN3-204ENST00000524201 CUX2O14529 1486 aa38.69■■■■□ 3.78
NKAIN3-204ENST00000524201 ERCC6Q03468 1493 aa38.68■■■■□ 3.78
NKAIN3-204ENST00000524201 PEG3Q9GZU2 1588 aa38.59■■■■□ 3.77
NKAIN3-204ENST00000524201 BAZ1BQ9UIG0 1483 aaKnown RBP38.59■■■■□ 3.77
NKAIN3-204ENST00000524201 NESP48681 1621 aa38.53■■■■□ 3.76
NKAIN3-204ENST00000524201 MROH2BQ7Z745 1585 aa38.47■■■■□ 3.75
NKAIN3-204ENST00000524201 LAMC3Q9Y6N6 1575 aa38.23■■■■□ 3.71
NKAIN3-204ENST00000524201 THOC2Q8NI27 1593 aaKnown RBP38.14■■■■□ 3.7
NKAIN3-204ENST00000524201 PDS5BQ9NTI5 1447 aa38.02■■■■□ 3.68
NKAIN3-204ENST00000524201 KIF21AQ7Z4S6 1674 aa37.97■■■■□ 3.67
NKAIN3-204ENST00000524201 WIZO95785 1651 aa37.96■■■■□ 3.67
NKAIN3-204ENST00000524201 CADPSQ9ULU8 1353 aa37.95■■■■□ 3.67
NKAIN3-204ENST00000524201 MRC2Q9UBG0 1479 aa37.7■■■■□ 3.63
NKAIN3-204ENST00000524201 RSF1Q96T23 1441 aaPredicted RBP37.67■■■■□ 3.62
NKAIN3-204ENST00000524201 WDR62O43379 1518 aa37.62■■■■□ 3.61
NKAIN3-204ENST00000524201 CFTRP13569 1480 aa37.52■■■■□ 3.6
NKAIN3-204ENST00000524201 CEP164Q9UPV0 1460 aa37.52■■■■□ 3.6
NKAIN3-204ENST00000524201 FANCD2Q9BXW9 1451 aa37.5■■■■□ 3.59
NKAIN3-204ENST00000524201 TOP2AP11388 1531 aaKnown RBP37.49■■■■□ 3.59
NKAIN3-204ENST00000524201 URB2Q14146 1524 aaKnown RBP37.21■■■■□ 3.55
NKAIN3-204ENST00000524201 CCDC88BA6NC98 1476 aa37.1■■■■□ 3.53
NKAIN3-204ENST00000524201 PRDM2Q13029 1718 aa37.02■■■■□ 3.52
NKAIN3-204ENST00000524201 TRIM41Q8WV44 630 aa36.97■■■■□ 3.51
NKAIN3-204ENST00000524201 OSCARQ8IYS5 282 aa36.92■■■■□ 3.5
NKAIN3-204ENST00000524201 IFT140Q96RY7 1462 aa36.79■■■■□ 3.48
NKAIN3-204ENST00000524201 TOPBP1Q92547 1522 aa36.79■■■■□ 3.48
NKAIN3-204ENST00000524201 ZNF608Q9ULD9 1512 aaPredicted RBP36.76■■■■□ 3.48
NKAIN3-204ENST00000524201 ABCC8Q09428 1581 aa36.68■■■■□ 3.46
NKAIN3-204ENST00000524201 DNMBPQ6XZF7 1577 aa36.62■■■■□ 3.45
NKAIN3-204ENST00000524201 EIF4G3O43432 1585 aaKnown RBP36.5■■■■□ 3.43
NKAIN3-204ENST00000524201 TARBP1Q13395 1621 aaKnown RBP36.47■■■■□ 3.43
NKAIN3-204ENST00000524201 AQRO60306 1485 aaKnown RBP eCLIP36.42■■■■□ 3.42
NKAIN3-204ENST00000524201 POLA1P09884 1462 aaPredicted RBP36.42■■■■□ 3.42
NKAIN3-204ENST00000524201 RIMBP3CA6NJZ7 1639 aa36.41■■■■□ 3.42
NKAIN3-204ENST00000524201 RIMBP3BA6NNM3 1639 aa36.41■■■■□ 3.42
NKAIN3-204ENST00000524201 RIMBP3Q9UFD9 1639 aa36.41■■■■□ 3.42
NKAIN3-204ENST00000524201 ARHGEF11O15085 1522 aa36.32■■■■□ 3.4
NKAIN3-204ENST00000524201 RAD54L2Q9Y4B4 1467 aa36.28■■■■□ 3.4
NKAIN3-204ENST00000524201 SOGA1O94964 1423 aa36.24■■■■□ 3.39
NKAIN3-204ENST00000524201 CHD1O14646 1710 aa36.21■■■■□ 3.39
NKAIN3-204ENST00000524201 TDRD9Q8NDG6 1382 aaKnown RBP36.18■■■■□ 3.38
NKAIN3-204ENST00000524201 FGD5Q6ZNL6 1462 aa36.16■■■■□ 3.38
NKAIN3-204ENST00000524201 CUX1P39880 1505 aa36.14■■■■□ 3.38
NKAIN3-204ENST00000524201 FBLN2P98095 1184 aa36.12■■■■□ 3.37
NKAIN3-204ENST00000524201 WDR97A6NE52 1622 aa36.07■■■■□ 3.36
NKAIN3-204ENST00000524201 CYB5RLQ6IPT4 315 aa36.05■■■■□ 3.36
NKAIN3-204ENST00000524201 SNAPC4Q5SXM2 1469 aa36.02■■■■□ 3.36
NKAIN3-204ENST00000524201 ARAP1Q96P48 1450 aa35.98■■■■□ 3.35
NKAIN3-204ENST00000524201 GRIN2BQ13224 1484 aa35.92■■■■□ 3.34
NKAIN3-204ENST00000524201 MAGI1Q96QZ7 1491 aaPredicted RBP35.92■■■■□ 3.34
NKAIN3-204ENST00000524201 CLASP1Q7Z460 1538 aa35.88■■■■□ 3.33
NKAIN3-204ENST00000524201 SUPT5HO00267 1087 aaKnown RBP35.87■■■■□ 3.33
NKAIN3-204ENST00000524201 CHMP7Q8WUX9 453 aaPredicted RBP35.87■■■■□ 3.33
NKAIN3-204ENST00000524201 SYNJ2O15056 1496 aa35.81■■■■□ 3.32
NKAIN3-204ENST00000524201 SYNJ1O43426 1573 aa35.79■■■■□ 3.32
NKAIN3-204ENST00000524201 GAPVD1Q14C86 1478 aa35.79■■■■□ 3.32
NKAIN3-204ENST00000524201 ABCA10Q8WWZ4 1543 aa35.77■■■■□ 3.32
NKAIN3-204ENST00000524201 PBRM1Q86U86 1689 aa35.72■■■■□ 3.31
NKAIN3-204ENST00000524201 ABCA5Q8WWZ7 1642 aa35.7■■■■□ 3.31
NKAIN3-204ENST00000524201 TRHP20396 242 aaPredicted RBP35.61■■■■□ 3.29
NKAIN3-204ENST00000524201 WRNQ14191 1432 aaPredicted RBP eCLIP35.59■■■■□ 3.29
NKAIN3-204ENST00000524201 TOP2BQ02880 1626 aa35.52■■■■□ 3.28
NKAIN3-204ENST00000524201 BIVM-ERCC5R4GMW8 1640 aa35.51■■■■□ 3.28
NKAIN3-204ENST00000524201 GRIN2AQ12879 1464 aa35.47■■■■□ 3.27
NKAIN3-204ENST00000524201 ADAMTS12P58397 1594 aa35.42■■■■□ 3.26
NKAIN3-204ENST00000524201 NUP160Q12769 1436 aa35.39■■■■□ 3.26
NKAIN3-204ENST00000524201 CEP170Q5SW79 1584 aa35.34■■■■□ 3.25
NKAIN3-204ENST00000524201 FHAD1B1AJZ9 1412 aa35.34■■■■□ 3.25
NKAIN3-204ENST00000524201 ERCC6L2Q5T890 1561 aa35.31■■■■□ 3.24
NKAIN3-204ENST00000524201 ERICH3Q5RHP9 1530 aa35.3■■■■□ 3.24
NKAIN3-204ENST00000524201 SHROOM2Q13796 1616 aa35.21■■■■□ 3.23
NKAIN3-204ENST00000524201 PRG4Q92954 1404 aaPredicted RBP35.01■■■■□ 3.2
NKAIN3-204ENST00000524201 JPH4Q96JJ6 628 aa35.01■■■■□ 3.2
NKAIN3-204ENST00000524201 RUSC2Q8N2Y8 1516 aa34.92■■■■□ 3.18
NKAIN3-204ENST00000524201 IGF1RP08069 1367 aa34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms