RNA–Protein interactions for RNA: ENST00000524196.5

PSEN2-210, Transcript of presenilin 2, humanhuman

TSL 4

Gene PSEN2, Length 734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-210ENST00000524196 NISCHQ9Y2I1 1504 aa28.64■■■□□ 2.18
PSEN2-210ENST00000524196 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.67
PSEN2-210ENST00000524196 ABCC9O60706 1549 aa24.98■■□□□ 1.59
PSEN2-210ENST00000524196 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.43
PSEN2-210ENST00000524196 NACADO15069 1562 aa23.93■■□□□ 1.42
PSEN2-210ENST00000524196 ZCCHC6Q5VYS8 1495 aaKnown RBP23.85■■□□□ 1.41
PSEN2-210ENST00000524196 DCAF8L2P0C7V8 631 aa23.84■■□□□ 1.41
PSEN2-210ENST00000524196 MYO15BQ96JP2 1530 aa23.8■■□□□ 1.4
PSEN2-210ENST00000524196 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
PSEN2-210ENST00000524196 UNC13AQ9UPW8 1703 aa23.55■■□□□ 1.36
PSEN2-210ENST00000524196 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.33
PSEN2-210ENST00000524196 PABPN1Q86U42 306 aaKnown RBP eCLIP23.35■■□□□ 1.33
PSEN2-210ENST00000524196 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
PSEN2-210ENST00000524196 DNAJC5BQ9UF47 199 aa23.14■■□□□ 1.29
PSEN2-210ENST00000524196 SHROOM4Q9ULL8 1493 aa22.97■■□□□ 1.27
PSEN2-210ENST00000524196 EIF4G1Q04637 1599 aaKnown RBP22.69■■□□□ 1.22
PSEN2-210ENST00000524196 CC2D2AQ9P2K1 1620 aa22.62■■□□□ 1.21
PSEN2-210ENST00000524196 CECR2Q9BXF3 1484 aa22.44■■□□□ 1.18
PSEN2-210ENST00000524196 SMARCA4P51532 1647 aa22.24■■□□□ 1.15
PSEN2-210ENST00000524196 BAZ1AQ9NRL2 1556 aaPredicted RBP22.15■■□□□ 1.14
PSEN2-210ENST00000524196 NCAPD3P42695 1498 aa22.14■■□□□ 1.13
PSEN2-210ENST00000524196 ATAD2BQ9ULI0 1458 aa22.14■■□□□ 1.13
PSEN2-210ENST00000524196 MROH2BQ7Z745 1585 aa22.11■■□□□ 1.13
PSEN2-210ENST00000524196 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
PSEN2-210ENST00000524196 SMARCA2P51531 1590 aa22.04■■□□□ 1.12
PSEN2-210ENST00000524196 HMGXB3Q12766 1538 aa21.99■■□□□ 1.11
PSEN2-210ENST00000524196 BAZ1BQ9UIG0 1483 aaKnown RBP21.88■■□□□ 1.09
PSEN2-210ENST00000524196 WIZO95785 1651 aa21.86■■□□□ 1.09
PSEN2-210ENST00000524196 RSF1Q96T23 1441 aaPredicted RBP21.82■■□□□ 1.08
PSEN2-210ENST00000524196 NESP48681 1621 aa21.66■■□□□ 1.06
PSEN2-210ENST00000524196 TOP2AP11388 1531 aaKnown RBP21.56■■□□□ 1.04
PSEN2-210ENST00000524196 LAMC3Q9Y6N6 1575 aa21.51■■□□□ 1.03
PSEN2-210ENST00000524196 CADPSQ9ULU8 1353 aa21.46■■□□□ 1.03
PSEN2-210ENST00000524196 ERCC6Q03468 1493 aa21.44■■□□□ 1.02
PSEN2-210ENST00000524196 KIF21AQ7Z4S6 1674 aa21.38■■□□□ 1.01
PSEN2-210ENST00000524196 CCDC88BA6NC98 1476 aa21.36■■□□□ 1.01
PSEN2-210ENST00000524196 CFTRP13569 1480 aa21.34■■□□□ 1.01
PSEN2-210ENST00000524196 THOC2Q8NI27 1593 aaKnown RBP21.33■■□□□ 1.01
PSEN2-210ENST00000524196 PDS5BQ9NTI5 1447 aa21.32■■□□□ 1
PSEN2-210ENST00000524196 CUX2O14529 1486 aa21.29■■□□□ 1
PSEN2-210ENST00000524196 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
PSEN2-210ENST00000524196 MRC2Q9UBG0 1479 aa21.15■□□□□ 0.98
PSEN2-210ENST00000524196 PRDM2Q13029 1718 aa21.15■□□□□ 0.98
PSEN2-210ENST00000524196 CEP164Q9UPV0 1460 aa21.14■□□□□ 0.98
PSEN2-210ENST00000524196 WDR62O43379 1518 aa21.12■□□□□ 0.97
PSEN2-210ENST00000524196 SUPT5HO00267 1087 aaKnown RBP21.11■□□□□ 0.97
PSEN2-210ENST00000524196 URB2Q14146 1524 aaKnown RBP21.05■□□□□ 0.96
PSEN2-210ENST00000524196 TOPBP1Q92547 1522 aa20.88■□□□□ 0.93
PSEN2-210ENST00000524196 DNMBPQ6XZF7 1577 aa20.82■□□□□ 0.92
PSEN2-210ENST00000524196 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
PSEN2-210ENST00000524196 DNAJC5Q9H3Z4 198 aa20.78■□□□□ 0.92
PSEN2-210ENST00000524196 CUX1P39880 1505 aa20.73■□□□□ 0.91
PSEN2-210ENST00000524196 ZNF608Q9ULD9 1512 aaPredicted RBP20.72■□□□□ 0.91
PSEN2-210ENST00000524196 IFT140Q96RY7 1462 aa20.71■□□□□ 0.91
PSEN2-210ENST00000524196 POLA1P09884 1462 aaPredicted RBP20.7■□□□□ 0.9
PSEN2-210ENST00000524196 TARBP1Q13395 1621 aaKnown RBP20.7■□□□□ 0.9
PSEN2-210ENST00000524196 RAD54L2Q9Y4B4 1467 aa20.63■□□□□ 0.89
PSEN2-210ENST00000524196 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
PSEN2-210ENST00000524196 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
PSEN2-210ENST00000524196 SOGA1O94964 1423 aa20.58■□□□□ 0.88
PSEN2-210ENST00000524196 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.88
PSEN2-210ENST00000524196 SYNJ1O43426 1573 aa20.53■□□□□ 0.88
PSEN2-210ENST00000524196 WDR97A6NE52 1622 aa20.51■□□□□ 0.87
PSEN2-210ENST00000524196 BIVM-ERCC5R4GMW8 1640 aa20.51■□□□□ 0.87
PSEN2-210ENST00000524196 TOP2BQ02880 1626 aa20.5■□□□□ 0.87
PSEN2-210ENST00000524196 TDRD9Q8NDG6 1382 aaKnown RBP20.5■□□□□ 0.87
PSEN2-210ENST00000524196 WRNQ14191 1432 aaPredicted RBP eCLIP20.5■□□□□ 0.87
PSEN2-210ENST00000524196 ABCA10Q8WWZ4 1543 aa20.43■□□□□ 0.86
PSEN2-210ENST00000524196 OSCARQ8IYS5 282 aa20.38■□□□□ 0.85
PSEN2-210ENST00000524196 ABCA5Q8WWZ7 1642 aa20.38■□□□□ 0.85
PSEN2-210ENST00000524196 CHD1O14646 1710 aa20.35■□□□□ 0.85
PSEN2-210ENST00000524196 GAPVD1Q14C86 1478 aa20.34■□□□□ 0.85
PSEN2-210ENST00000524196 GRIN2BQ13224 1484 aa20.33■□□□□ 0.85
PSEN2-210ENST00000524196 SNAPC4Q5SXM2 1469 aa20.33■□□□□ 0.85
PSEN2-210ENST00000524196 PBRM1Q86U86 1689 aa20.32■□□□□ 0.84
PSEN2-210ENST00000524196 MAGI1Q96QZ7 1491 aaPredicted RBP20.28■□□□□ 0.84
PSEN2-210ENST00000524196 SYNJ2O15056 1496 aa20.22■□□□□ 0.83
PSEN2-210ENST00000524196 FBLN2P98095 1184 aa20.21■□□□□ 0.83
PSEN2-210ENST00000524196 CHMP7Q8WUX9 453 aaPredicted RBP20.16■□□□□ 0.82
PSEN2-210ENST00000524196 ERICH3Q5RHP9 1530 aa20.16■□□□□ 0.82
PSEN2-210ENST00000524196 ADAMTS12P58397 1594 aa20.16■□□□□ 0.82
PSEN2-210ENST00000524196 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
PSEN2-210ENST00000524196 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
PSEN2-210ENST00000524196 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
PSEN2-210ENST00000524196 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
PSEN2-210ENST00000524196 ARHGEF11O15085 1522 aa20.11■□□□□ 0.81
PSEN2-210ENST00000524196 GRIN2AQ12879 1464 aa20.1■□□□□ 0.81
PSEN2-210ENST00000524196 FHAD1B1AJZ9 1412 aa20.09■□□□□ 0.81
PSEN2-210ENST00000524196 IGF1RP08069 1367 aa20.07■□□□□ 0.8
PSEN2-210ENST00000524196 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
PSEN2-210ENST00000524196 NUP160Q12769 1436 aa20.04■□□□□ 0.8
PSEN2-210ENST00000524196 KIF27Q86VH2 1401 aa20.04■□□□□ 0.8
PSEN2-210ENST00000524196 RUSC2Q8N2Y8 1516 aa20■□□□□ 0.79
PSEN2-210ENST00000524196 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
PSEN2-210ENST00000524196 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
PSEN2-210ENST00000524196 CUL7Q14999 1698 aa19.94■□□□□ 0.78
PSEN2-210ENST00000524196 ERCC6L2Q5T890 1561 aa19.92■□□□□ 0.78
PSEN2-210ENST00000524196 SHROOM2Q13796 1616 aa19.91■□□□□ 0.78
PSEN2-210ENST00000524196 CARMIL1Q5VZK9 1371 aa19.89■□□□□ 0.77
PSEN2-210ENST00000524196 CYB5RLQ6IPT4 315 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms