RNA–Protein interactions for RNA: ENST00000524152.5

MSC-AS1-210, MSC antisense RNA 1, humanhuman

TSL 4

Gene MSC-AS1, Length 571 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-210ENST00000524152 NISCHQ9Y2I1 1504 aa23.69■■□□□ 1.38
MSC-AS1-210ENST00000524152 ABCC9O60706 1549 aa21.27■■□□□ 1
MSC-AS1-210ENST00000524152 CCDC180Q9P1Z9 1646 aa21.21■□□□□ 0.99
MSC-AS1-210ENST00000524152 RB1CC1Q8TDY2 1594 aa20.23■□□□□ 0.83
MSC-AS1-210ENST00000524152 NACADO15069 1562 aa20.1■□□□□ 0.81
MSC-AS1-210ENST00000524152 DCAF8L2P0C7V8 631 aa20.02■□□□□ 0.8
MSC-AS1-210ENST00000524152 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
MSC-AS1-210ENST00000524152 MYO15BQ96JP2 1530 aa19.85■□□□□ 0.77
MSC-AS1-210ENST00000524152 PABPN1Q86U42 306 aaKnown RBP eCLIP19.83■□□□□ 0.77
MSC-AS1-210ENST00000524152 UNC13AQ9UPW8 1703 aa19.67■□□□□ 0.74
MSC-AS1-210ENST00000524152 ZCCHC6Q5VYS8 1495 aaKnown RBP19.63■□□□□ 0.73
MSC-AS1-210ENST00000524152 BICRAQ9NZM4 1560 aa19.62■□□□□ 0.73
MSC-AS1-210ENST00000524152 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
MSC-AS1-210ENST00000524152 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
MSC-AS1-210ENST00000524152 SCRIBQ14160 1630 aa19.35■□□□□ 0.69
MSC-AS1-210ENST00000524152 CC2D2AQ9P2K1 1620 aa19.18■□□□□ 0.66
MSC-AS1-210ENST00000524152 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
MSC-AS1-210ENST00000524152 EIF4G1Q04637 1599 aaKnown RBP19.17■□□□□ 0.66
MSC-AS1-210ENST00000524152 NCAPD3P42695 1498 aa18.58■□□□□ 0.57
MSC-AS1-210ENST00000524152 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.55
MSC-AS1-210ENST00000524152 SMARCA4P51532 1647 aa18.45■□□□□ 0.54
MSC-AS1-210ENST00000524152 SMARCA2P51531 1590 aa18.45■□□□□ 0.54
MSC-AS1-210ENST00000524152 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
MSC-AS1-210ENST00000524152 ERCC6Q03468 1493 aa18.39■□□□□ 0.53
MSC-AS1-210ENST00000524152 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
MSC-AS1-210ENST00000524152 DNAJC5Q9H3Z4 198 aa18.37■□□□□ 0.53
MSC-AS1-210ENST00000524152 CUX2O14529 1486 aa18.35■□□□□ 0.53
MSC-AS1-210ENST00000524152 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.53
MSC-AS1-210ENST00000524152 PEG3Q9GZU2 1588 aa18.3■□□□□ 0.52
MSC-AS1-210ENST00000524152 NESP48681 1621 aa18.26■□□□□ 0.51
MSC-AS1-210ENST00000524152 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
MSC-AS1-210ENST00000524152 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
MSC-AS1-210ENST00000524152 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
MSC-AS1-210ENST00000524152 THOC2Q8NI27 1593 aaKnown RBP18.05■□□□□ 0.48
MSC-AS1-210ENST00000524152 CADPSQ9ULU8 1353 aa18.03■□□□□ 0.48
MSC-AS1-210ENST00000524152 WIZO95785 1651 aa17.98■□□□□ 0.47
MSC-AS1-210ENST00000524152 KIF21AQ7Z4S6 1674 aa17.96■□□□□ 0.47
MSC-AS1-210ENST00000524152 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.46
MSC-AS1-210ENST00000524152 MRC2Q9UBG0 1479 aa17.89■□□□□ 0.45
MSC-AS1-210ENST00000524152 WDR62O43379 1518 aa17.84■□□□□ 0.45
MSC-AS1-210ENST00000524152 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
MSC-AS1-210ENST00000524152 CFTRP13569 1480 aa17.81■□□□□ 0.44
MSC-AS1-210ENST00000524152 FANCD2Q9BXW9 1451 aa17.81■□□□□ 0.44
MSC-AS1-210ENST00000524152 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
MSC-AS1-210ENST00000524152 URB2Q14146 1524 aaKnown RBP17.64■□□□□ 0.41
MSC-AS1-210ENST00000524152 CCDC88BA6NC98 1476 aa17.61■□□□□ 0.41
MSC-AS1-210ENST00000524152 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
MSC-AS1-210ENST00000524152 OSCARQ8IYS5 282 aa17.53■□□□□ 0.4
MSC-AS1-210ENST00000524152 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
MSC-AS1-210ENST00000524152 IFT140Q96RY7 1462 aa17.48■□□□□ 0.39
MSC-AS1-210ENST00000524152 TOPBP1Q92547 1522 aa17.45■□□□□ 0.38
MSC-AS1-210ENST00000524152 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
MSC-AS1-210ENST00000524152 ABCC8Q09428 1581 aa17.43■□□□□ 0.38
MSC-AS1-210ENST00000524152 DNMBPQ6XZF7 1577 aa17.38■□□□□ 0.37
MSC-AS1-210ENST00000524152 EIF4G3O43432 1585 aaKnown RBP17.31■□□□□ 0.36
MSC-AS1-210ENST00000524152 AQRO60306 1485 aaKnown RBP eCLIP17.29■□□□□ 0.36
MSC-AS1-210ENST00000524152 POLA1P09884 1462 aaPredicted RBP17.28■□□□□ 0.36
MSC-AS1-210ENST00000524152 TARBP1Q13395 1621 aaKnown RBP17.28■□□□□ 0.36
MSC-AS1-210ENST00000524152 RIMBP3CA6NJZ7 1639 aa17.24■□□□□ 0.35
MSC-AS1-210ENST00000524152 RIMBP3BA6NNM3 1639 aa17.24■□□□□ 0.35
MSC-AS1-210ENST00000524152 RIMBP3Q9UFD9 1639 aa17.24■□□□□ 0.35
MSC-AS1-210ENST00000524152 SOGA1O94964 1423 aa17.21■□□□□ 0.35
MSC-AS1-210ENST00000524152 ARHGEF11O15085 1522 aa17.21■□□□□ 0.35
MSC-AS1-210ENST00000524152 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
MSC-AS1-210ENST00000524152 FBLN2P98095 1184 aa17.19■□□□□ 0.34
MSC-AS1-210ENST00000524152 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
MSC-AS1-210ENST00000524152 FGD5Q6ZNL6 1462 aa17.17■□□□□ 0.34
MSC-AS1-210ENST00000524152 CUX1P39880 1505 aa17.14■□□□□ 0.33
MSC-AS1-210ENST00000524152 CHD1O14646 1710 aa17.13■□□□□ 0.33
MSC-AS1-210ENST00000524152 CYB5RLQ6IPT4 315 aa17.12■□□□□ 0.33
MSC-AS1-210ENST00000524152 WDR97A6NE52 1622 aa17.11■□□□□ 0.33
MSC-AS1-210ENST00000524152 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
MSC-AS1-210ENST00000524152 SUPT5HO00267 1087 aaKnown RBP17.09■□□□□ 0.33
MSC-AS1-210ENST00000524152 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
MSC-AS1-210ENST00000524152 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
MSC-AS1-210ENST00000524152 GRIN2BQ13224 1484 aa17.06■□□□□ 0.32
MSC-AS1-210ENST00000524152 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
MSC-AS1-210ENST00000524152 SYNJ2O15056 1496 aa17.01■□□□□ 0.31
MSC-AS1-210ENST00000524152 GAPVD1Q14C86 1478 aa17■□□□□ 0.31
MSC-AS1-210ENST00000524152 CLASP1Q7Z460 1538 aa17■□□□□ 0.31
MSC-AS1-210ENST00000524152 SYNJ1O43426 1573 aa16.99■□□□□ 0.31
MSC-AS1-210ENST00000524152 ABCA10Q8WWZ4 1543 aa16.98■□□□□ 0.31
MSC-AS1-210ENST00000524152 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
MSC-AS1-210ENST00000524152 TRHP20396 242 aaPredicted RBP16.93■□□□□ 0.3
MSC-AS1-210ENST00000524152 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
MSC-AS1-210ENST00000524152 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
MSC-AS1-210ENST00000524152 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
MSC-AS1-210ENST00000524152 GRIN2AQ12879 1464 aa16.84■□□□□ 0.29
MSC-AS1-210ENST00000524152 BIVM-ERCC5R4GMW8 1640 aa16.82■□□□□ 0.28
MSC-AS1-210ENST00000524152 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
MSC-AS1-210ENST00000524152 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
MSC-AS1-210ENST00000524152 NUP160Q12769 1436 aa16.79■□□□□ 0.28
MSC-AS1-210ENST00000524152 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
MSC-AS1-210ENST00000524152 CEP170Q5SW79 1584 aa16.75■□□□□ 0.27
MSC-AS1-210ENST00000524152 ERCC6L2Q5T890 1561 aa16.72■□□□□ 0.27
MSC-AS1-210ENST00000524152 SHROOM2Q13796 1616 aa16.67■□□□□ 0.26
MSC-AS1-210ENST00000524152 PRG4Q92954 1404 aaPredicted RBP16.63■□□□□ 0.25
MSC-AS1-210ENST00000524152 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
MSC-AS1-210ENST00000524152 KIF27Q86VH2 1401 aa16.58■□□□□ 0.24
MSC-AS1-210ENST00000524152 RUSC2Q8N2Y8 1516 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms