RNA–Protein interactions for RNA: ENST00000524092.1

TOP1MT-219, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 313 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-219ENST00000524092 NISCHQ9Y2I1 1504 aa56.64■■■■■ 6.66
TOP1MT-219ENST00000524092 CCDC180Q9P1Z9 1646 aa50.43■■■■■ 5.66
TOP1MT-219ENST00000524092 ABCC9O60706 1549 aa49.6■■■■■ 5.53
TOP1MT-219ENST00000524092 RB1CC1Q8TDY2 1594 aa47.59■■■■■ 5.21
TOP1MT-219ENST00000524092 NACADO15069 1562 aa47.5■■■■■ 5.19
TOP1MT-219ENST00000524092 DCAF8L2P0C7V8 631 aa47.36■■■■■ 5.17
TOP1MT-219ENST00000524092 MYO15BQ96JP2 1530 aa47.18■■■■■ 5.14
TOP1MT-219ENST00000524092 ZCCHC6Q5VYS8 1495 aaKnown RBP47.14■■■■■ 5.14
TOP1MT-219ENST00000524092 DCAF1Q9Y4B6 1507 aa46.87■■■■■ 5.09
TOP1MT-219ENST00000524092 UNC13AQ9UPW8 1703 aa46.47■■■■■ 5.03
TOP1MT-219ENST00000524092 PABPN1Q86U42 306 aaKnown RBP eCLIP46.31■■■■■ 5
TOP1MT-219ENST00000524092 BICRAQ9NZM4 1560 aa46.19■■■■■ 4.99
TOP1MT-219ENST00000524092 SCRIBQ14160 1630 aa45.99■■■■■ 4.95
TOP1MT-219ENST00000524092 DNAJC5BQ9UF47 199 aa45.8■■■■■ 4.92
TOP1MT-219ENST00000524092 SHROOM4Q9ULL8 1493 aa45.7■■■■■ 4.91
TOP1MT-219ENST00000524092 EIF4G1Q04637 1599 aaKnown RBP44.98■■■■■ 4.79
TOP1MT-219ENST00000524092 CC2D2AQ9P2K1 1620 aa44.85■■■■■ 4.77
TOP1MT-219ENST00000524092 CECR2Q9BXF3 1484 aa44.6■■■■■ 4.73
TOP1MT-219ENST00000524092 SMARCA4P51532 1647 aa43.98■■■■■ 4.63
TOP1MT-219ENST00000524092 BAZ1AQ9NRL2 1556 aaPredicted RBP43.9■■■■■ 4.62
TOP1MT-219ENST00000524092 NCAPD3P42695 1498 aa43.86■■■■■ 4.61
TOP1MT-219ENST00000524092 ATAD2BQ9ULI0 1458 aa43.84■■■■■ 4.61
TOP1MT-219ENST00000524092 SMARCA2P51531 1590 aa43.75■■■■■ 4.59
TOP1MT-219ENST00000524092 MROH2BQ7Z745 1585 aa43.65■■■■■ 4.58
TOP1MT-219ENST00000524092 HMGXB3Q12766 1538 aa43.6■■■■■ 4.57
TOP1MT-219ENST00000524092 PEG3Q9GZU2 1588 aa43.59■■■■■ 4.57
TOP1MT-219ENST00000524092 BAZ1BQ9UIG0 1483 aaKnown RBP43.44■■■■■ 4.54
TOP1MT-219ENST00000524092 WIZO95785 1651 aa43.13■■■■■ 4.49
TOP1MT-219ENST00000524092 RSF1Q96T23 1441 aaPredicted RBP43.08■■■■■ 4.49
TOP1MT-219ENST00000524092 NESP48681 1621 aa42.86■■■■■ 4.45
TOP1MT-219ENST00000524092 ERCC6Q03468 1493 aa42.75■■■■■ 4.43
TOP1MT-219ENST00000524092 LAMC3Q9Y6N6 1575 aa42.7■■■■■ 4.43
TOP1MT-219ENST00000524092 TOP2AP11388 1531 aaKnown RBP42.68■■■■■ 4.42
TOP1MT-219ENST00000524092 CADPSQ9ULU8 1353 aa42.56■■■■■ 4.4
TOP1MT-219ENST00000524092 PDS5BQ9NTI5 1447 aa42.44■■■■■ 4.38
TOP1MT-219ENST00000524092 CUX2O14529 1486 aa42.43■■■■■ 4.38
TOP1MT-219ENST00000524092 KIF21AQ7Z4S6 1674 aa42.29■■■■■ 4.36
TOP1MT-219ENST00000524092 CFTRP13569 1480 aa42.26■■■■■ 4.36
TOP1MT-219ENST00000524092 THOC2Q8NI27 1593 aaKnown RBP42.26■■■■■ 4.36
TOP1MT-219ENST00000524092 CCDC88BA6NC98 1476 aa42.2■■■■■ 4.35
TOP1MT-219ENST00000524092 FANCD2Q9BXW9 1451 aa42.06■■■■■ 4.32
TOP1MT-219ENST00000524092 MRC2Q9UBG0 1479 aa42.02■■■■■ 4.32
TOP1MT-219ENST00000524092 CEP164Q9UPV0 1460 aa42.01■■■■■ 4.32
TOP1MT-219ENST00000524092 WDR62O43379 1518 aa41.9■■■■■ 4.3
TOP1MT-219ENST00000524092 PRDM2Q13029 1718 aa41.83■■■■■ 4.29
TOP1MT-219ENST00000524092 SUPT5HO00267 1087 aaKnown RBP41.74■■■■■ 4.27
TOP1MT-219ENST00000524092 URB2Q14146 1524 aaKnown RBP41.66■■■■■ 4.26
TOP1MT-219ENST00000524092 DNAJC5Q9H3Z4 198 aa41.43■■■■■ 4.22
TOP1MT-219ENST00000524092 TOPBP1Q92547 1522 aa41.36■■■■■ 4.21
TOP1MT-219ENST00000524092 ABCC8Q09428 1581 aa41.33■■■■■ 4.21
TOP1MT-219ENST00000524092 DNMBPQ6XZF7 1577 aa41.28■■■■■ 4.2
TOP1MT-219ENST00000524092 IFT140Q96RY7 1462 aa41.16■■■■■ 4.18
TOP1MT-219ENST00000524092 ZNF608Q9ULD9 1512 aaPredicted RBP41■■■■■ 4.15
TOP1MT-219ENST00000524092 POLA1P09884 1462 aaPredicted RBP41■■■■■ 4.15
TOP1MT-219ENST00000524092 CUX1P39880 1505 aa40.96■■■■■ 4.15
TOP1MT-219ENST00000524092 TARBP1Q13395 1621 aaKnown RBP40.93■■■■■ 4.14
TOP1MT-219ENST00000524092 FGD5Q6ZNL6 1462 aa40.85■■■■■ 4.13
TOP1MT-219ENST00000524092 SOGA1O94964 1423 aa40.82■■■■■ 4.12
TOP1MT-219ENST00000524092 RAD54L2Q9Y4B4 1467 aa40.82■■■■■ 4.12
TOP1MT-219ENST00000524092 EIF4G3O43432 1585 aaKnown RBP40.8■■■■■ 4.12
TOP1MT-219ENST00000524092 AQRO60306 1485 aaKnown RBP eCLIP40.74■■■■■ 4.11
TOP1MT-219ENST00000524092 TDRD9Q8NDG6 1382 aaKnown RBP40.62■■■■■ 4.09
TOP1MT-219ENST00000524092 OSCARQ8IYS5 282 aa40.61■■■■■ 4.09
TOP1MT-219ENST00000524092 WRNQ14191 1432 aaPredicted RBP eCLIP40.6■■■■■ 4.09
TOP1MT-219ENST00000524092 WDR97A6NE52 1622 aa40.58■■■■■ 4.09
TOP1MT-219ENST00000524092 TOP2BQ02880 1626 aa40.53■■■■■ 4.08
TOP1MT-219ENST00000524092 BIVM-ERCC5R4GMW8 1640 aa40.52■■■■■ 4.08
TOP1MT-219ENST00000524092 SYNJ1O43426 1573 aa40.51■■■■■ 4.08
TOP1MT-219ENST00000524092 ABCA10Q8WWZ4 1543 aa40.47■■■■■ 4.07
TOP1MT-219ENST00000524092 GRIN2BQ13224 1484 aa40.38■■■■■ 4.05
TOP1MT-219ENST00000524092 SNAPC4Q5SXM2 1469 aa40.35■■■■■ 4.05
TOP1MT-219ENST00000524092 GAPVD1Q14C86 1478 aa40.33■■■■■ 4.05
TOP1MT-219ENST00000524092 ABCA5Q8WWZ7 1642 aa40.31■■■■■ 4.04
TOP1MT-219ENST00000524092 MAGI1Q96QZ7 1491 aaPredicted RBP40.3■■■■■ 4.04
TOP1MT-219ENST00000524092 CHD1O14646 1710 aa40.3■■■■■ 4.04
TOP1MT-219ENST00000524092 FBLN2P98095 1184 aa40.26■■■■■ 4.04
TOP1MT-219ENST00000524092 PBRM1Q86U86 1689 aa40.21■■■■■ 4.03
TOP1MT-219ENST00000524092 SYNJ2O15056 1496 aa40.14■■■■■ 4.02
TOP1MT-219ENST00000524092 CHMP7Q8WUX9 453 aaPredicted RBP40.13■■■■■ 4.01
TOP1MT-219ENST00000524092 RIMBP3CA6NJZ7 1639 aa39.97■■■■□ 3.99
TOP1MT-219ENST00000524092 RIMBP3BA6NNM3 1639 aa39.97■■■■□ 3.99
TOP1MT-219ENST00000524092 RIMBP3Q9UFD9 1639 aa39.97■■■■□ 3.99
TOP1MT-219ENST00000524092 ERICH3Q5RHP9 1530 aa39.96■■■■□ 3.99
TOP1MT-219ENST00000524092 ARHGEF11O15085 1522 aa39.96■■■■□ 3.99
TOP1MT-219ENST00000524092 ADAMTS12P58397 1594 aa39.93■■■■□ 3.98
TOP1MT-219ENST00000524092 CLASP1Q7Z460 1538 aa39.93■■■■□ 3.98
TOP1MT-219ENST00000524092 TRIM41Q8WV44 630 aa39.91■■■■□ 3.98
TOP1MT-219ENST00000524092 FHAD1B1AJZ9 1412 aa39.88■■■■□ 3.97
TOP1MT-219ENST00000524092 GRIN2AQ12879 1464 aa39.86■■■■□ 3.97
TOP1MT-219ENST00000524092 KIF27Q86VH2 1401 aa39.77■■■■□ 3.96
TOP1MT-219ENST00000524092 NUP160Q12769 1436 aa39.71■■■■□ 3.95
TOP1MT-219ENST00000524092 IGF1RP08069 1367 aa39.67■■■■□ 3.94
TOP1MT-219ENST00000524092 CEP170Q5SW79 1584 aa39.66■■■■□ 3.94
TOP1MT-219ENST00000524092 ARAP1Q96P48 1450 aa39.63■■■■□ 3.94
TOP1MT-219ENST00000524092 CYB5RLQ6IPT4 315 aa39.59■■■■□ 3.93
TOP1MT-219ENST00000524092 CUL7Q14999 1698 aa39.51■■■■□ 3.92
TOP1MT-219ENST00000524092 SHROOM2Q13796 1616 aa39.41■■■■□ 3.9
TOP1MT-219ENST00000524092 CARMIL1Q5VZK9 1371 aa39.4■■■■□ 3.9
TOP1MT-219ENST00000524092 RUSC2Q8N2Y8 1516 aa39.35■■■■□ 3.89
TOP1MT-219ENST00000524092 ERCC6L2Q5T890 1561 aa39.34■■■■□ 3.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms