RNA–Protein interactions for RNA: ENST00000524035.5

MEG3-222, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 2,853 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-222ENST00000524035 NISCHQ9Y2I1 1504 aa37.14■■■■□ 3.54
MEG3-222ENST00000524035 CCDC180Q9P1Z9 1646 aa31.93■■■□□ 2.7
MEG3-222ENST00000524035 ZCCHC6Q5VYS8 1495 aaKnown RBP31.31■■■□□ 2.6
MEG3-222ENST00000524035 SHROOM4Q9ULL8 1493 aa31.17■■■□□ 2.58
MEG3-222ENST00000524035 DCAF8L2P0C7V8 631 aa30.87■■■□□ 2.53
MEG3-222ENST00000524035 DCAF1Q9Y4B6 1507 aa30.5■■■□□ 2.47
MEG3-222ENST00000524035 SUPT5HO00267 1087 aaKnown RBP30.29■■■□□ 2.44
MEG3-222ENST00000524035 ABCC9O60706 1549 aa29.96■■■□□ 2.39
MEG3-222ENST00000524035 MYO15BQ96JP2 1530 aa29.83■■■□□ 2.37
MEG3-222ENST00000524035 SCRIBQ14160 1630 aa29.77■■■□□ 2.36
MEG3-222ENST00000524035 NACADO15069 1562 aa29.6■■■□□ 2.33
MEG3-222ENST00000524035 RB1CC1Q8TDY2 1594 aa29.25■■■□□ 2.27
MEG3-222ENST00000524035 CHIC1Q5VXU3 224 aa29.19■■■□□ 2.26
MEG3-222ENST00000524035 RSF1Q96T23 1441 aaPredicted RBP29.14■■■□□ 2.26
MEG3-222ENST00000524035 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
MEG3-222ENST00000524035 UNC13AQ9UPW8 1703 aa28.87■■■□□ 2.21
MEG3-222ENST00000524035 MROH2BQ7Z745 1585 aa28.84■■■□□ 2.21
MEG3-222ENST00000524035 WIZO95785 1651 aa28.69■■■□□ 2.18
MEG3-222ENST00000524035 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
MEG3-222ENST00000524035 PABPN1Q86U42 306 aaKnown RBP eCLIP28.5■■■□□ 2.15
MEG3-222ENST00000524035 BICRAQ9NZM4 1560 aa28.47■■■□□ 2.15
MEG3-222ENST00000524035 SMARCA4P51532 1647 aa28.44■■■□□ 2.14
MEG3-222ENST00000524035 LOC105371045A0A1W2PR82 267 aa28.29■■■□□ 2.12
MEG3-222ENST00000524035 TRIM41Q8WV44 630 aa28.28■■■□□ 2.12
MEG3-222ENST00000524035 TOP2AP11388 1531 aaKnown RBP28.22■■■□□ 2.11
MEG3-222ENST00000524035 CCDC88BA6NC98 1476 aa28.06■■■□□ 2.08
MEG3-222ENST00000524035 SMARCA2P51531 1590 aa28.05■■■□□ 2.08
MEG3-222ENST00000524035 EIF4G1Q04637 1599 aaKnown RBP28.05■■■□□ 2.08
MEG3-222ENST00000524035 FAM9AQ8IZU1 332 aaPredicted RBP28.01■■■□□ 2.07
MEG3-222ENST00000524035 PEG3Q9GZU2 1588 aa27.91■■■□□ 2.06
MEG3-222ENST00000524035 ABCC8Q09428 1581 aa27.81■■■□□ 2.04
MEG3-222ENST00000524035 ATAD2BQ9ULI0 1458 aa27.8■■■□□ 2.04
MEG3-222ENST00000524035 EHMT2Q96KQ7 1210 aa27.77■■■□□ 2.04
MEG3-222ENST00000524035 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.02
MEG3-222ENST00000524035 PCGF6Q9BYE7 350 aa27.67■■■□□ 2.02
MEG3-222ENST00000524035 SOGA1O94964 1423 aa27.41■■□□□ 1.98
MEG3-222ENST00000524035 WRNQ14191 1432 aaPredicted RBP eCLIP27.39■■□□□ 1.98
MEG3-222ENST00000524035 NCAPD3P42695 1498 aa27.36■■□□□ 1.97
MEG3-222ENST00000524035 HMGXB3Q12766 1538 aa27.34■■□□□ 1.97
MEG3-222ENST00000524035 SYNJ1O43426 1573 aa27.32■■□□□ 1.96
MEG3-222ENST00000524035 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
MEG3-222ENST00000524035 TRIM26Q12899 539 aaPredicted RBP27.3■■□□□ 1.96
MEG3-222ENST00000524035 HRCP23327 699 aa27.27■■□□□ 1.96
MEG3-222ENST00000524035 CSRNP3Q8WYN3 585 aa27.18■■□□□ 1.94
MEG3-222ENST00000524035 EEA1Q15075 1411 aa27.18■■□□□ 1.94
MEG3-222ENST00000524035 PPARGC1BQ86YN6 1023 aaKnown RBP27.05■■□□□ 1.92
MEG3-222ENST00000524035 TOP2BQ02880 1626 aa27.04■■□□□ 1.92
MEG3-222ENST00000524035 CC2D2AQ9P2K1 1620 aa27.02■■□□□ 1.92
MEG3-222ENST00000524035 UBTFP17480 764 aaKnown RBP27.01■■□□□ 1.91
MEG3-222ENST00000524035 CEP162Q5TB80 1403 aa27.01■■□□□ 1.91
MEG3-222ENST00000524035 TNIKQ9UKE5 1360 aa27.01■■□□□ 1.91
MEG3-222ENST00000524035 CFTRP13569 1480 aa26.98■■□□□ 1.91
MEG3-222ENST00000524035 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
MEG3-222ENST00000524035 GOLGA3Q08378 1498 aa26.97■■□□□ 1.91
MEG3-222ENST00000524035 CUX1P39880 1505 aa26.9■■□□□ 1.9
MEG3-222ENST00000524035 CEP164Q9UPV0 1460 aa26.88■■□□□ 1.89
MEG3-222ENST00000524035 KIF21BO75037 1637 aa26.88■■□□□ 1.89
MEG3-222ENST00000524035 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
MEG3-222ENST00000524035 CADPSQ9ULU8 1353 aa26.78■■□□□ 1.88
MEG3-222ENST00000524035 RAPGEF2Q9Y4G8 1499 aa26.77■■□□□ 1.88
MEG3-222ENST00000524035 TTBK1Q5TCY1 1321 aaPredicted RBP26.72■■□□□ 1.87
MEG3-222ENST00000524035 CLIP1P30622 1438 aa26.63■■□□□ 1.85
MEG3-222ENST00000524035 RANGAP1P46060 587 aaPredicted RBP26.62■■□□□ 1.85
MEG3-222ENST00000524035 KIF27Q86VH2 1401 aa26.6■■□□□ 1.85
MEG3-222ENST00000524035 PRXQ9BXM0 1461 aa26.58■■□□□ 1.85
MEG3-222ENST00000524035 ERICH3Q5RHP9 1530 aa26.54■■□□□ 1.84
MEG3-222ENST00000524035 FANCD2Q9BXW9 1451 aa26.54■■□□□ 1.84
MEG3-222ENST00000524035 NESP48681 1621 aa26.54■■□□□ 1.84
MEG3-222ENST00000524035 FGD5Q6ZNL6 1462 aa26.5■■□□□ 1.83
MEG3-222ENST00000524035 CUX2O14529 1486 aa26.47■■□□□ 1.83
MEG3-222ENST00000524035 VPS8Q8N3P4 1428 aa26.44■■□□□ 1.82
MEG3-222ENST00000524035 DNAJC5BQ9UF47 199 aa26.43■■□□□ 1.82
MEG3-222ENST00000524035 ZEB1P37275 1124 aaPredicted RBP26.42■■□□□ 1.82
MEG3-222ENST00000524035 IGF1RP08069 1367 aa26.36■■□□□ 1.81
MEG3-222ENST00000524035 DNMBPQ6XZF7 1577 aa26.35■■□□□ 1.81
MEG3-222ENST00000524035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.33■■□□□ 1.81
MEG3-222ENST00000524035 LAMC3Q9Y6N6 1575 aa26.32■■□□□ 1.8
MEG3-222ENST00000524035 TOPBP1Q92547 1522 aa26.32■■□□□ 1.8
MEG3-222ENST00000524035 ARAP1Q96P48 1450 aa26.29■■□□□ 1.8
MEG3-222ENST00000524035 RAD54L2Q9Y4B4 1467 aa26.29■■□□□ 1.8
MEG3-222ENST00000524035 APLP2Q06481 763 aa26.27■■□□□ 1.8
MEG3-222ENST00000524035 POLA1P09884 1462 aaPredicted RBP26.26■■□□□ 1.79
MEG3-222ENST00000524035 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
MEG3-222ENST00000524035 CCER1Q8TC90 406 aaPredicted RBP26.21■■□□□ 1.79
MEG3-222ENST00000524035 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.78
MEG3-222ENST00000524035 ABCA10Q8WWZ4 1543 aa26.17■■□□□ 1.78
MEG3-222ENST00000524035 ARHGAP35Q9NRY4 1499 aa26.16■■□□□ 1.78
MEG3-222ENST00000524035 KIF21AQ7Z4S6 1674 aa26.14■■□□□ 1.78
MEG3-222ENST00000524035 PDS5BQ9NTI5 1447 aa26.13■■□□□ 1.77
MEG3-222ENST00000524035 HNRNPUL2Q1KMD3 747 aaKnown RBP26.06■■□□□ 1.76
MEG3-222ENST00000524035 WDR97A6NE52 1622 aa26.05■■□□□ 1.76
MEG3-222ENST00000524035 KANK4Q5T7N3 995 aaPredicted RBP26.04■■□□□ 1.76
MEG3-222ENST00000524035 TDRD9Q8NDG6 1382 aaKnown RBP25.99■■□□□ 1.75
MEG3-222ENST00000524035 CUL7Q14999 1698 aa25.97■■□□□ 1.75
MEG3-222ENST00000524035 ABCA5Q8WWZ7 1642 aa25.93■■□□□ 1.74
MEG3-222ENST00000524035 P3H3Q8IVL6 736 aa25.92■■□□□ 1.74
MEG3-222ENST00000524035 GAPVD1Q14C86 1478 aa25.89■■□□□ 1.74
MEG3-222ENST00000524035 CTTNBP2Q8WZ74 1663 aa25.86■■□□□ 1.73
MEG3-222ENST00000524035 TARBP1Q13395 1621 aaKnown RBP25.85■■□□□ 1.73
MEG3-222ENST00000524035 FHOD3Q2V2M9 1422 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms