RNA–Protein interactions for RNA: ENST00000523868.2

CLVS1-210, Transcript of clavesin 1, humanhuman

TSL 4

Gene CLVS1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-210ENST00000523868 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
CLVS1-210ENST00000523868 ABCC9O60706 1549 aa15.58■□□□□ 0.09
CLVS1-210ENST00000523868 CCDC180Q9P1Z9 1646 aa15.46■□□□□ 0.07
CLVS1-210ENST00000523868 RB1CC1Q8TDY2 1594 aa14.76□□□□□ -0.05
CLVS1-210ENST00000523868 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
CLVS1-210ENST00000523868 NACADO15069 1562 aa14.61□□□□□ -0.07
CLVS1-210ENST00000523868 DCAF8L2P0C7V8 631 aa14.61□□□□□ -0.07
CLVS1-210ENST00000523868 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
CLVS1-210ENST00000523868 PABPN1Q86U42 306 aaKnown RBP eCLIP14.49□□□□□ -0.09
CLVS1-210ENST00000523868 BICRAQ9NZM4 1560 aa14.33□□□□□ -0.12
CLVS1-210ENST00000523868 MYO15BQ96JP2 1530 aa14.32□□□□□ -0.12
CLVS1-210ENST00000523868 ZCCHC6Q5VYS8 1495 aaKnown RBP14.21□□□□□ -0.13
CLVS1-210ENST00000523868 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
CLVS1-210ENST00000523868 DCAF1Q9Y4B6 1507 aa14.12□□□□□ -0.15
CLVS1-210ENST00000523868 CC2D2AQ9P2K1 1620 aa14.07□□□□□ -0.16
CLVS1-210ENST00000523868 SHROOM4Q9ULL8 1493 aa14.06□□□□□ -0.16
CLVS1-210ENST00000523868 CECR2Q9BXF3 1484 aa14.02□□□□□ -0.16
CLVS1-210ENST00000523868 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
CLVS1-210ENST00000523868 DNAJC5Q9H3Z4 198 aa13.48□□□□□ -0.25
CLVS1-210ENST00000523868 ERCC6Q03468 1493 aa13.47□□□□□ -0.25
CLVS1-210ENST00000523868 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
CLVS1-210ENST00000523868 SMARCA4P51532 1647 aa13.45□□□□□ -0.26
CLVS1-210ENST00000523868 ATAD2BQ9ULI0 1458 aa13.44□□□□□ -0.26
CLVS1-210ENST00000523868 SMARCA2P51531 1590 aa13.41□□□□□ -0.26
CLVS1-210ENST00000523868 CUX2O14529 1486 aa13.4□□□□□ -0.26
CLVS1-210ENST00000523868 HMGXB3Q12766 1538 aa13.39□□□□□ -0.27
CLVS1-210ENST00000523868 NESP48681 1621 aa13.36□□□□□ -0.27
CLVS1-210ENST00000523868 BAZ1BQ9UIG0 1483 aaKnown RBP13.35□□□□□ -0.27
CLVS1-210ENST00000523868 BAZ1AQ9NRL2 1556 aaPredicted RBP13.34□□□□□ -0.27
CLVS1-210ENST00000523868 PEG3Q9GZU2 1588 aa13.26□□□□□ -0.29
CLVS1-210ENST00000523868 MROH2BQ7Z745 1585 aa13.25□□□□□ -0.29
CLVS1-210ENST00000523868 THOC2Q8NI27 1593 aaKnown RBP13.24□□□□□ -0.29
CLVS1-210ENST00000523868 KIF21AQ7Z4S6 1674 aa13.23□□□□□ -0.29
CLVS1-210ENST00000523868 LAMC3Q9Y6N6 1575 aa13.22□□□□□ -0.29
CLVS1-210ENST00000523868 WIZO95785 1651 aa13.13□□□□□ -0.31
CLVS1-210ENST00000523868 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
CLVS1-210ENST00000523868 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
CLVS1-210ENST00000523868 MRC2Q9UBG0 1479 aa13.04□□□□□ -0.32
CLVS1-210ENST00000523868 WDR62O43379 1518 aa13.01□□□□□ -0.33
CLVS1-210ENST00000523868 CEP164Q9UPV0 1460 aa12.98□□□□□ -0.33
CLVS1-210ENST00000523868 FANCD2Q9BXW9 1451 aa12.96□□□□□ -0.34
CLVS1-210ENST00000523868 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
CLVS1-210ENST00000523868 TOP2AP11388 1531 aaKnown RBP12.92□□□□□ -0.34
CLVS1-210ENST00000523868 RSF1Q96T23 1441 aaPredicted RBP12.91□□□□□ -0.34
CLVS1-210ENST00000523868 CFTRP13569 1480 aa12.9□□□□□ -0.34
CLVS1-210ENST00000523868 PRDM2Q13029 1718 aa12.86□□□□□ -0.35
CLVS1-210ENST00000523868 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
CLVS1-210ENST00000523868 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
CLVS1-210ENST00000523868 CCDC88BA6NC98 1476 aa12.77□□□□□ -0.37
CLVS1-210ENST00000523868 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
CLVS1-210ENST00000523868 TOPBP1Q92547 1522 aa12.7□□□□□ -0.38
CLVS1-210ENST00000523868 IFT140Q96RY7 1462 aa12.7□□□□□ -0.38
CLVS1-210ENST00000523868 RIMBP3CA6NJZ7 1639 aa12.69□□□□□ -0.38
CLVS1-210ENST00000523868 RIMBP3BA6NNM3 1639 aa12.69□□□□□ -0.38
CLVS1-210ENST00000523868 RIMBP3Q9UFD9 1639 aa12.69□□□□□ -0.38
CLVS1-210ENST00000523868 EIF4G3O43432 1585 aaKnown RBP12.68□□□□□ -0.38
CLVS1-210ENST00000523868 DNMBPQ6XZF7 1577 aa12.65□□□□□ -0.38
CLVS1-210ENST00000523868 CHD1O14646 1710 aa12.63□□□□□ -0.39
CLVS1-210ENST00000523868 ABCC8Q09428 1581 aa12.62□□□□□ -0.39
CLVS1-210ENST00000523868 ARHGEF11O15085 1522 aa12.62□□□□□ -0.39
CLVS1-210ENST00000523868 TARBP1Q13395 1621 aaKnown RBP12.6□□□□□ -0.39
CLVS1-210ENST00000523868 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLVS1-210ENST00000523868 FBLN2P98095 1184 aa12.56□□□□□ -0.4
CLVS1-210ENST00000523868 POLA1P09884 1462 aaPredicted RBP12.56□□□□□ -0.4
CLVS1-210ENST00000523868 RAD54L2Q9Y4B4 1467 aa12.54□□□□□ -0.4
CLVS1-210ENST00000523868 CYB5RLQ6IPT4 315 aa12.53□□□□□ -0.4
CLVS1-210ENST00000523868 TDRD9Q8NDG6 1382 aaKnown RBP12.51□□□□□ -0.41
CLVS1-210ENST00000523868 SOGA1O94964 1423 aa12.5□□□□□ -0.41
CLVS1-210ENST00000523868 FGD5Q6ZNL6 1462 aa12.49□□□□□ -0.41
CLVS1-210ENST00000523868 ARAP1Q96P48 1450 aa12.48□□□□□ -0.41
CLVS1-210ENST00000523868 SNAPC4Q5SXM2 1469 aa12.47□□□□□ -0.41
CLVS1-210ENST00000523868 CUX1P39880 1505 aa12.46□□□□□ -0.42
CLVS1-210ENST00000523868 TRHP20396 242 aaPredicted RBP12.45□□□□□ -0.42
CLVS1-210ENST00000523868 WDR97A6NE52 1622 aa12.42□□□□□ -0.42
CLVS1-210ENST00000523868 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
CLVS1-210ENST00000523868 SYNJ1O43426 1573 aa12.41□□□□□ -0.42
CLVS1-210ENST00000523868 CHMP7Q8WUX9 453 aaPredicted RBP12.41□□□□□ -0.42
CLVS1-210ENST00000523868 CLASP1Q7Z460 1538 aa12.41□□□□□ -0.42
CLVS1-210ENST00000523868 GRIN2BQ13224 1484 aa12.4□□□□□ -0.43
CLVS1-210ENST00000523868 MAGI1Q96QZ7 1491 aaPredicted RBP12.4□□□□□ -0.43
CLVS1-210ENST00000523868 SYNJ2O15056 1496 aa12.37□□□□□ -0.43
CLVS1-210ENST00000523868 SUPT5HO00267 1087 aaKnown RBP12.36□□□□□ -0.43
CLVS1-210ENST00000523868 GAPVD1Q14C86 1478 aa12.35□□□□□ -0.43
CLVS1-210ENST00000523868 ABCA5Q8WWZ7 1642 aa12.33□□□□□ -0.44
CLVS1-210ENST00000523868 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
CLVS1-210ENST00000523868 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
CLVS1-210ENST00000523868 ERCC6L2Q5T890 1561 aa12.26□□□□□ -0.45
CLVS1-210ENST00000523868 WRNQ14191 1432 aaPredicted RBP eCLIP12.25□□□□□ -0.45
CLVS1-210ENST00000523868 GRIN2AQ12879 1464 aa12.25□□□□□ -0.45
CLVS1-210ENST00000523868 BIVM-ERCC5R4GMW8 1640 aa12.24□□□□□ -0.45
CLVS1-210ENST00000523868 TOP2BQ02880 1626 aa12.23□□□□□ -0.45
CLVS1-210ENST00000523868 CEP170Q5SW79 1584 aa12.23□□□□□ -0.45
CLVS1-210ENST00000523868 NUP160Q12769 1436 aa12.18□□□□□ -0.46
CLVS1-210ENST00000523868 SHROOM2Q13796 1616 aa12.17□□□□□ -0.46
CLVS1-210ENST00000523868 FHAD1B1AJZ9 1412 aa12.17□□□□□ -0.46
CLVS1-210ENST00000523868 ERICH3Q5RHP9 1530 aa12.16□□□□□ -0.46
CLVS1-210ENST00000523868 AEBP2Q6ZN18 517 aaPredicted RBP12.14□□□□□ -0.47
CLVS1-210ENST00000523868 PRG4Q92954 1404 aaPredicted RBP12.11□□□□□ -0.47
CLVS1-210ENST00000523868 KIF13AQ9H1H9 1805 aa12.1□□□□□ -0.47
CLVS1-210ENST00000523868 RUSC2Q8N2Y8 1516 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms