RNA–Protein interactions for RNA: ENST00000523836.5

CD74-211, Transcript of CD74 molecule, humanhuman

TSL 2

Gene CD74, Length 724 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-211ENST00000523836 NISCHQ9Y2I1 1504 aa30.96■■■□□ 2.55
CD74-211ENST00000523836 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
CD74-211ENST00000523836 ABCC9O60706 1549 aa27.51■■■□□ 2
CD74-211ENST00000523836 RB1CC1Q8TDY2 1594 aa26.29■■□□□ 1.8
CD74-211ENST00000523836 NACADO15069 1562 aa26.16■■□□□ 1.78
CD74-211ENST00000523836 DCAF8L2P0C7V8 631 aa26■■□□□ 1.75
CD74-211ENST00000523836 MYO15BQ96JP2 1530 aa25.87■■□□□ 1.73
CD74-211ENST00000523836 UNC13AQ9UPW8 1703 aa25.8■■□□□ 1.72
CD74-211ENST00000523836 ZCCHC6Q5VYS8 1495 aaKnown RBP25.69■■□□□ 1.7
CD74-211ENST00000523836 DNAJC5BQ9UF47 199 aa25.69■■□□□ 1.7
CD74-211ENST00000523836 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.69
CD74-211ENST00000523836 DCAF1Q9Y4B6 1507 aa25.59■■□□□ 1.69
CD74-211ENST00000523836 BICRAQ9NZM4 1560 aa25.55■■□□□ 1.68
CD74-211ENST00000523836 SCRIBQ14160 1630 aa25.25■■□□□ 1.63
CD74-211ENST00000523836 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
CD74-211ENST00000523836 CC2D2AQ9P2K1 1620 aa24.91■■□□□ 1.58
CD74-211ENST00000523836 EIF4G1Q04637 1599 aaKnown RBP24.88■■□□□ 1.57
CD74-211ENST00000523836 CECR2Q9BXF3 1484 aa24.77■■□□□ 1.56
CD74-211ENST00000523836 NCAPD3P42695 1498 aa24.14■■□□□ 1.46
CD74-211ENST00000523836 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
CD74-211ENST00000523836 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
CD74-211ENST00000523836 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
CD74-211ENST00000523836 BAZ1AQ9NRL2 1556 aaPredicted RBP24.01■■□□□ 1.43
CD74-211ENST00000523836 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
CD74-211ENST00000523836 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
CD74-211ENST00000523836 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
CD74-211ENST00000523836 BAZ1BQ9UIG0 1483 aaKnown RBP23.85■■□□□ 1.41
CD74-211ENST00000523836 ERCC6Q03468 1493 aa23.73■■□□□ 1.39
CD74-211ENST00000523836 NESP48681 1621 aa23.71■■□□□ 1.39
CD74-211ENST00000523836 CUX2O14529 1486 aa23.66■■□□□ 1.38
CD74-211ENST00000523836 WIZO95785 1651 aa23.6■■□□□ 1.37
CD74-211ENST00000523836 LAMC3Q9Y6N6 1575 aa23.58■■□□□ 1.37
CD74-211ENST00000523836 THOC2Q8NI27 1593 aaKnown RBP23.46■■□□□ 1.35
CD74-211ENST00000523836 KIF21AQ7Z4S6 1674 aa23.45■■□□□ 1.34
CD74-211ENST00000523836 DNAJC5Q9H3Z4 198 aa23.45■■□□□ 1.34
CD74-211ENST00000523836 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
CD74-211ENST00000523836 PDS5BQ9NTI5 1447 aa23.41■■□□□ 1.34
CD74-211ENST00000523836 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
CD74-211ENST00000523836 TOP2AP11388 1531 aaKnown RBP23.29■■□□□ 1.32
CD74-211ENST00000523836 MRC2Q9UBG0 1479 aa23.2■■□□□ 1.3
CD74-211ENST00000523836 CFTRP13569 1480 aa23.18■■□□□ 1.3
CD74-211ENST00000523836 WDR62O43379 1518 aa23.16■■□□□ 1.3
CD74-211ENST00000523836 CEP164Q9UPV0 1460 aa23.14■■□□□ 1.29
CD74-211ENST00000523836 FANCD2Q9BXW9 1451 aa23.13■■□□□ 1.29
CD74-211ENST00000523836 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
CD74-211ENST00000523836 CCDC88BA6NC98 1476 aa23.03■■□□□ 1.28
CD74-211ENST00000523836 URB2Q14146 1524 aaKnown RBP22.95■■□□□ 1.26
CD74-211ENST00000523836 TOPBP1Q92547 1522 aa22.73■■□□□ 1.23
CD74-211ENST00000523836 ABCC8Q09428 1581 aa22.69■■□□□ 1.22
CD74-211ENST00000523836 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
CD74-211ENST00000523836 DNMBPQ6XZF7 1577 aa22.67■■□□□ 1.22
CD74-211ENST00000523836 ZNF608Q9ULD9 1512 aaPredicted RBP22.63■■□□□ 1.21
CD74-211ENST00000523836 OSCARQ8IYS5 282 aa22.59■■□□□ 1.21
CD74-211ENST00000523836 TARBP1Q13395 1621 aaKnown RBP22.54■■□□□ 1.2
CD74-211ENST00000523836 EIF4G3O43432 1585 aaKnown RBP22.53■■□□□ 1.2
CD74-211ENST00000523836 POLA1P09884 1462 aaPredicted RBP22.5■■□□□ 1.19
CD74-211ENST00000523836 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
CD74-211ENST00000523836 TRIM41Q8WV44 630 aa22.46■■□□□ 1.19
CD74-211ENST00000523836 AQRO60306 1485 aaKnown RBP eCLIP22.45■■□□□ 1.18
CD74-211ENST00000523836 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
CD74-211ENST00000523836 CUX1P39880 1505 aa22.4■■□□□ 1.18
CD74-211ENST00000523836 SOGA1O94964 1423 aa22.4■■□□□ 1.18
CD74-211ENST00000523836 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
CD74-211ENST00000523836 CHD1O14646 1710 aa22.37■■□□□ 1.17
CD74-211ENST00000523836 RIMBP3CA6NJZ7 1639 aa22.32■■□□□ 1.16
CD74-211ENST00000523836 RIMBP3BA6NNM3 1639 aa22.32■■□□□ 1.16
CD74-211ENST00000523836 RIMBP3Q9UFD9 1639 aa22.32■■□□□ 1.16
CD74-211ENST00000523836 TDRD9Q8NDG6 1382 aaKnown RBP22.32■■□□□ 1.16
CD74-211ENST00000523836 WDR97A6NE52 1622 aa22.31■■□□□ 1.16
CD74-211ENST00000523836 ARHGEF11O15085 1522 aa22.25■■□□□ 1.15
CD74-211ENST00000523836 FBLN2P98095 1184 aa22.22■■□□□ 1.15
CD74-211ENST00000523836 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
CD74-211ENST00000523836 GRIN2BQ13224 1484 aa22.17■■□□□ 1.14
CD74-211ENST00000523836 MAGI1Q96QZ7 1491 aaPredicted RBP22.17■■□□□ 1.14
CD74-211ENST00000523836 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
CD74-211ENST00000523836 ABCA10Q8WWZ4 1543 aa22.15■■□□□ 1.14
CD74-211ENST00000523836 GAPVD1Q14C86 1478 aa22.13■■□□□ 1.13
CD74-211ENST00000523836 ABCA5Q8WWZ7 1642 aa22.12■■□□□ 1.13
CD74-211ENST00000523836 BIVM-ERCC5R4GMW8 1640 aa22.12■■□□□ 1.13
CD74-211ENST00000523836 TOP2BQ02880 1626 aa22.1■■□□□ 1.13
CD74-211ENST00000523836 CHMP7Q8WUX9 453 aaPredicted RBP22.1■■□□□ 1.13
CD74-211ENST00000523836 SYNJ2O15056 1496 aa22.09■■□□□ 1.13
CD74-211ENST00000523836 CLASP1Q7Z460 1538 aa22.08■■□□□ 1.13
CD74-211ENST00000523836 SYNJ1O43426 1573 aa22.08■■□□□ 1.12
CD74-211ENST00000523836 WRNQ14191 1432 aaPredicted RBP eCLIP22.07■■□□□ 1.12
CD74-211ENST00000523836 CYB5RLQ6IPT4 315 aa22.05■■□□□ 1.12
CD74-211ENST00000523836 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
CD74-211ENST00000523836 ADAMTS12P58397 1594 aa21.92■■□□□ 1.1
CD74-211ENST00000523836 GRIN2AQ12879 1464 aa21.9■■□□□ 1.1
CD74-211ENST00000523836 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
CD74-211ENST00000523836 FHAD1B1AJZ9 1412 aa21.85■■□□□ 1.09
CD74-211ENST00000523836 CEP170Q5SW79 1584 aa21.84■■□□□ 1.09
CD74-211ENST00000523836 NUP160Q12769 1436 aa21.82■■□□□ 1.08
CD74-211ENST00000523836 ERCC6L2Q5T890 1561 aa21.75■■□□□ 1.07
CD74-211ENST00000523836 SHROOM2Q13796 1616 aa21.75■■□□□ 1.07
CD74-211ENST00000523836 TRHP20396 242 aaPredicted RBP21.72■■□□□ 1.07
CD74-211ENST00000523836 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
CD74-211ENST00000523836 IGF1RP08069 1367 aa21.62■■□□□ 1.05
CD74-211ENST00000523836 RUSC2Q8N2Y8 1516 aa21.61■■□□□ 1.05
CD74-211ENST00000523836 CUL7Q14999 1698 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms