RNA–Protein interactions for RNA: ENST00000523811.2

MTCL1-215, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 3

Gene MTCL1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-215ENST00000523811 NISCHQ9Y2I1 1504 aa40.26■■■■■ 4.03
MTCL1-215ENST00000523811 CCDC180Q9P1Z9 1646 aa35.77■■■■□ 3.32
MTCL1-215ENST00000523811 ABCC9O60706 1549 aa34.71■■■■□ 3.15
MTCL1-215ENST00000523811 ZCCHC6Q5VYS8 1495 aaKnown RBP33.58■■■□□ 2.97
MTCL1-215ENST00000523811 NACADO15069 1562 aa33.51■■■□□ 2.95
MTCL1-215ENST00000523811 RB1CC1Q8TDY2 1594 aa33.49■■■□□ 2.95
MTCL1-215ENST00000523811 DCAF8L2P0C7V8 631 aa33.42■■■□□ 2.94
MTCL1-215ENST00000523811 MYO15BQ96JP2 1530 aa33.35■■■□□ 2.93
MTCL1-215ENST00000523811 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
MTCL1-215ENST00000523811 UNC13AQ9UPW8 1703 aa32.99■■■□□ 2.87
MTCL1-215ENST00000523811 SCRIBQ14160 1630 aa32.62■■■□□ 2.81
MTCL1-215ENST00000523811 BICRAQ9NZM4 1560 aa32.58■■■□□ 2.81
MTCL1-215ENST00000523811 PABPN1Q86U42 306 aaKnown RBP eCLIP32.43■■■□□ 2.78
MTCL1-215ENST00000523811 SHROOM4Q9ULL8 1493 aa32.1■■■□□ 2.73
MTCL1-215ENST00000523811 DNAJC5BQ9UF47 199 aa31.7■■■□□ 2.67
MTCL1-215ENST00000523811 EIF4G1Q04637 1599 aaKnown RBP31.63■■■□□ 2.65
MTCL1-215ENST00000523811 CC2D2AQ9P2K1 1620 aa31.48■■■□□ 2.63
MTCL1-215ENST00000523811 CECR2Q9BXF3 1484 aa31.36■■■□□ 2.61
MTCL1-215ENST00000523811 SMARCA4P51532 1647 aa31.24■■■□□ 2.59
MTCL1-215ENST00000523811 BAZ1AQ9NRL2 1556 aaPredicted RBP31.17■■■□□ 2.58
MTCL1-215ENST00000523811 MROH2BQ7Z745 1585 aa31.05■■■□□ 2.56
MTCL1-215ENST00000523811 ATAD2BQ9ULI0 1458 aa30.95■■■□□ 2.55
MTCL1-215ENST00000523811 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
MTCL1-215ENST00000523811 SMARCA2P51531 1590 aa30.92■■■□□ 2.54
MTCL1-215ENST00000523811 NCAPD3P42695 1498 aa30.89■■■□□ 2.53
MTCL1-215ENST00000523811 WIZO95785 1651 aa30.8■■■□□ 2.52
MTCL1-215ENST00000523811 HMGXB3Q12766 1538 aa30.78■■■□□ 2.52
MTCL1-215ENST00000523811 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
MTCL1-215ENST00000523811 BAZ1BQ9UIG0 1483 aaKnown RBP30.69■■■□□ 2.5
MTCL1-215ENST00000523811 TOP2AP11388 1531 aaKnown RBP30.39■■■□□ 2.46
MTCL1-215ENST00000523811 NESP48681 1621 aa30.15■■■□□ 2.42
MTCL1-215ENST00000523811 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
MTCL1-215ENST00000523811 SUPT5HO00267 1087 aaKnown RBP30.03■■■□□ 2.4
MTCL1-215ENST00000523811 CCDC88BA6NC98 1476 aa30.03■■■□□ 2.4
MTCL1-215ENST00000523811 CADPSQ9ULU8 1353 aa29.97■■■□□ 2.39
MTCL1-215ENST00000523811 KIF21AQ7Z4S6 1674 aa29.9■■■□□ 2.38
MTCL1-215ENST00000523811 CFTRP13569 1480 aa29.87■■■□□ 2.37
MTCL1-215ENST00000523811 PRDM2Q13029 1718 aa29.87■■■□□ 2.37
MTCL1-215ENST00000523811 ERCC6Q03468 1493 aa29.83■■■□□ 2.37
MTCL1-215ENST00000523811 PDS5BQ9NTI5 1447 aa29.77■■■□□ 2.36
MTCL1-215ENST00000523811 THOC2Q8NI27 1593 aaKnown RBP29.69■■■□□ 2.34
MTCL1-215ENST00000523811 FANCD2Q9BXW9 1451 aa29.66■■■□□ 2.34
MTCL1-215ENST00000523811 CEP164Q9UPV0 1460 aa29.59■■■□□ 2.33
MTCL1-215ENST00000523811 MRC2Q9UBG0 1479 aa29.51■■■□□ 2.31
MTCL1-215ENST00000523811 CUX2O14529 1486 aa29.48■■■□□ 2.31
MTCL1-215ENST00000523811 WDR62O43379 1518 aa29.45■■■□□ 2.31
MTCL1-215ENST00000523811 URB2Q14146 1524 aaKnown RBP29.4■■■□□ 2.3
MTCL1-215ENST00000523811 TOPBP1Q92547 1522 aa29.24■■■□□ 2.27
MTCL1-215ENST00000523811 DNMBPQ6XZF7 1577 aa29.23■■■□□ 2.27
MTCL1-215ENST00000523811 ABCC8Q09428 1581 aa29.18■■■□□ 2.26
MTCL1-215ENST00000523811 CUX1P39880 1505 aa29.13■■■□□ 2.25
MTCL1-215ENST00000523811 POLA1P09884 1462 aaPredicted RBP28.99■■■□□ 2.23
MTCL1-215ENST00000523811 TARBP1Q13395 1621 aaKnown RBP28.98■■■□□ 2.23
MTCL1-215ENST00000523811 BIVM-ERCC5R4GMW8 1640 aa28.98■■■□□ 2.23
MTCL1-215ENST00000523811 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
MTCL1-215ENST00000523811 FGD5Q6ZNL6 1462 aa28.96■■■□□ 2.23
MTCL1-215ENST00000523811 IFT140Q96RY7 1462 aa28.94■■■□□ 2.22
MTCL1-215ENST00000523811 TOP2BQ02880 1626 aa28.93■■■□□ 2.22
MTCL1-215ENST00000523811 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.22
MTCL1-215ENST00000523811 RAD54L2Q9Y4B4 1467 aa28.87■■■□□ 2.21
MTCL1-215ENST00000523811 ZNF608Q9ULD9 1512 aaPredicted RBP28.86■■■□□ 2.21
MTCL1-215ENST00000523811 WDR97A6NE52 1622 aa28.84■■■□□ 2.21
MTCL1-215ENST00000523811 SOGA1O94964 1423 aa28.83■■■□□ 2.21
MTCL1-215ENST00000523811 EIF4G3O43432 1585 aaKnown RBP28.79■■■□□ 2.2
MTCL1-215ENST00000523811 AQRO60306 1485 aaKnown RBP eCLIP28.69■■■□□ 2.18
MTCL1-215ENST00000523811 ABCA10Q8WWZ4 1543 aa28.67■■■□□ 2.18
MTCL1-215ENST00000523811 TDRD9Q8NDG6 1382 aaKnown RBP28.64■■■□□ 2.18
MTCL1-215ENST00000523811 ABCA5Q8WWZ7 1642 aa28.61■■■□□ 2.17
MTCL1-215ENST00000523811 PBRM1Q86U86 1689 aa28.61■■■□□ 2.17
MTCL1-215ENST00000523811 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
MTCL1-215ENST00000523811 CHD1O14646 1710 aa28.48■■■□□ 2.15
MTCL1-215ENST00000523811 GRIN2BQ13224 1484 aa28.47■■■□□ 2.15
MTCL1-215ENST00000523811 SNAPC4Q5SXM2 1469 aa28.43■■■□□ 2.14
MTCL1-215ENST00000523811 MAGI1Q96QZ7 1491 aaPredicted RBP28.38■■■□□ 2.13
MTCL1-215ENST00000523811 ERICH3Q5RHP9 1530 aa28.33■■■□□ 2.13
MTCL1-215ENST00000523811 TRIM41Q8WV44 630 aa28.33■■■□□ 2.13
MTCL1-215ENST00000523811 DNAJC5Q9H3Z4 198 aa28.31■■■□□ 2.12
MTCL1-215ENST00000523811 ADAMTS12P58397 1594 aa28.31■■■□□ 2.12
MTCL1-215ENST00000523811 KIF27Q86VH2 1401 aa28.28■■■□□ 2.12
MTCL1-215ENST00000523811 SYNJ2O15056 1496 aa28.27■■■□□ 2.12
MTCL1-215ENST00000523811 OSCARQ8IYS5 282 aa28.23■■■□□ 2.11
MTCL1-215ENST00000523811 RUSC2Q8N2Y8 1516 aa28.22■■■□□ 2.11
MTCL1-215ENST00000523811 FBLN2P98095 1184 aa28.21■■■□□ 2.11
MTCL1-215ENST00000523811 CHIC1Q5VXU3 224 aa28.19■■■□□ 2.1
MTCL1-215ENST00000523811 IGF1RP08069 1367 aa28.18■■■□□ 2.1
MTCL1-215ENST00000523811 FHAD1B1AJZ9 1412 aa28.18■■■□□ 2.1
MTCL1-215ENST00000523811 CUL7Q14999 1698 aa28.16■■■□□ 2.1
MTCL1-215ENST00000523811 CHMP7Q8WUX9 453 aaPredicted RBP28.16■■■□□ 2.1
MTCL1-215ENST00000523811 GRIN2AQ12879 1464 aa28.14■■■□□ 2.09
MTCL1-215ENST00000523811 CLASP1Q7Z460 1538 aa28.08■■■□□ 2.09
MTCL1-215ENST00000523811 CEP170Q5SW79 1584 aa28.05■■■□□ 2.08
MTCL1-215ENST00000523811 NUP160Q12769 1436 aa28.01■■■□□ 2.07
MTCL1-215ENST00000523811 CARMIL1Q5VZK9 1371 aa27.99■■■□□ 2.07
MTCL1-215ENST00000523811 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
MTCL1-215ENST00000523811 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
MTCL1-215ENST00000523811 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
MTCL1-215ENST00000523811 ARHGEF11O15085 1522 aa27.87■■■□□ 2.05
MTCL1-215ENST00000523811 RAPGEF2Q9Y4G8 1499 aa27.87■■■□□ 2.05
MTCL1-215ENST00000523811 EEA1Q15075 1411 aa27.86■■■□□ 2.05
MTCL1-215ENST00000523811 SHROOM2Q13796 1616 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms