RNA–Protein interactions for RNA: ENST00000523791.1

AP003354.1-201, humanhuman

TSL 2 BASIC

Gene AP003354.1, Length 533 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003354.1-201ENST00000523791 NISCHQ9Y2I1 1504 aa20■□□□□ 0.79
AP003354.1-201ENST00000523791 AEBP2Q6ZN18 517 aaPredicted RBP18.04■□□□□ 0.48
AP003354.1-201ENST00000523791 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
AP003354.1-201ENST00000523791 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
AP003354.1-201ENST00000523791 ABCC9O60706 1549 aa16.79■□□□□ 0.28
AP003354.1-201ENST00000523791 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
AP003354.1-201ENST00000523791 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
AP003354.1-201ENST00000523791 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
AP003354.1-201ENST00000523791 DCAF8L2P0C7V8 631 aa16.53■□□□□ 0.24
AP003354.1-201ENST00000523791 NACADO15069 1562 aa16.51■□□□□ 0.23
AP003354.1-201ENST00000523791 RB1CC1Q8TDY2 1594 aa16.41■□□□□ 0.22
AP003354.1-201ENST00000523791 SCRIBQ14160 1630 aa16.01■□□□□ 0.15
AP003354.1-201ENST00000523791 SHROOM4Q9ULL8 1493 aa15.95■□□□□ 0.14
AP003354.1-201ENST00000523791 UNC13AQ9UPW8 1703 aa15.85■□□□□ 0.13
AP003354.1-201ENST00000523791 PHF23Q9BUL5 403 aaPredicted RBP15.84■□□□□ 0.13
AP003354.1-201ENST00000523791 BICRAQ9NZM4 1560 aa15.79■□□□□ 0.12
AP003354.1-201ENST00000523791 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
AP003354.1-201ENST00000523791 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
AP003354.1-201ENST00000523791 CECR2Q9BXF3 1484 aa15.46■□□□□ 0.07
AP003354.1-201ENST00000523791 SMARCA4P51532 1647 aa15.4■□□□□ 0.06
AP003354.1-201ENST00000523791 EIF4G1Q04637 1599 aaKnown RBP15.4■□□□□ 0.06
AP003354.1-201ENST00000523791 RSF1Q96T23 1441 aaPredicted RBP15.39■□□□□ 0.05
AP003354.1-201ENST00000523791 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
AP003354.1-201ENST00000523791 PEG3Q9GZU2 1588 aa15.3■□□□□ 0.04
AP003354.1-201ENST00000523791 SMARCA2P51531 1590 aa15.29■□□□□ 0.04
AP003354.1-201ENST00000523791 SUPT5HO00267 1087 aaKnown RBP15.27■□□□□ 0.04
AP003354.1-201ENST00000523791 ATAD2BQ9ULI0 1458 aa15.26■□□□□ 0.03
AP003354.1-201ENST00000523791 NCAPD3P42695 1498 aa15.23■□□□□ 0.03
AP003354.1-201ENST00000523791 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.02
AP003354.1-201ENST00000523791 WIZO95785 1651 aa15.18■□□□□ 0.02
AP003354.1-201ENST00000523791 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
AP003354.1-201ENST00000523791 BAZ1BQ9UIG0 1483 aaKnown RBP15.17■□□□□ 0.02
AP003354.1-201ENST00000523791 TOP2AP11388 1531 aaKnown RBP15.14■□□□□ 0.01
AP003354.1-201ENST00000523791 SENP3Q9H4L4 574 aaPredicted RBP15.14■□□□□ 0.01
AP003354.1-201ENST00000523791 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
AP003354.1-201ENST00000523791 CCDC88BA6NC98 1476 aa14.94□□□□□ -0.02
AP003354.1-201ENST00000523791 CADPSQ9ULU8 1353 aa14.81□□□□□ -0.04
AP003354.1-201ENST00000523791 CFTRP13569 1480 aa14.78□□□□□ -0.04
AP003354.1-201ENST00000523791 LAMC3Q9Y6N6 1575 aa14.74□□□□□ -0.05
AP003354.1-201ENST00000523791 PDS5BQ9NTI5 1447 aa14.68□□□□□ -0.06
AP003354.1-201ENST00000523791 PLPPR3Q6T4P5 718 aa14.63□□□□□ -0.07
AP003354.1-201ENST00000523791 PRDM2Q13029 1718 aa14.61□□□□□ -0.07
AP003354.1-201ENST00000523791 NESP48681 1621 aa14.61□□□□□ -0.07
AP003354.1-201ENST00000523791 FANCD2Q9BXW9 1451 aa14.6□□□□□ -0.07
AP003354.1-201ENST00000523791 CEP164Q9UPV0 1460 aa14.56□□□□□ -0.08
AP003354.1-201ENST00000523791 ABCC8Q09428 1581 aa14.53□□□□□ -0.08
AP003354.1-201ENST00000523791 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
AP003354.1-201ENST00000523791 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
AP003354.1-201ENST00000523791 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
AP003354.1-201ENST00000523791 MRC2Q9UBG0 1479 aa14.45□□□□□ -0.1
AP003354.1-201ENST00000523791 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
AP003354.1-201ENST00000523791 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
AP003354.1-201ENST00000523791 TOP2BQ02880 1626 aa14.41□□□□□ -0.1
AP003354.1-201ENST00000523791 CUX1P39880 1505 aa14.4□□□□□ -0.1
AP003354.1-201ENST00000523791 BIVM-ERCC5R4GMW8 1640 aa14.39□□□□□ -0.11
AP003354.1-201ENST00000523791 TOPBP1Q92547 1522 aa14.39□□□□□ -0.11
AP003354.1-201ENST00000523791 URB2Q14146 1524 aaKnown RBP14.38□□□□□ -0.11
AP003354.1-201ENST00000523791 WDR62O43379 1518 aa14.37□□□□□ -0.11
AP003354.1-201ENST00000523791 SYNJ1O43426 1573 aa14.37□□□□□ -0.11
AP003354.1-201ENST00000523791 THOC2Q8NI27 1593 aaKnown RBP14.32□□□□□ -0.12
AP003354.1-201ENST00000523791 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
AP003354.1-201ENST00000523791 POLA1P09884 1462 aaPredicted RBP14.29□□□□□ -0.12
AP003354.1-201ENST00000523791 SOGA1O94964 1423 aa14.28□□□□□ -0.12
AP003354.1-201ENST00000523791 EEA1Q15075 1411 aa14.28□□□□□ -0.12
AP003354.1-201ENST00000523791 IFT140Q96RY7 1462 aa14.27□□□□□ -0.12
AP003354.1-201ENST00000523791 CUX2O14529 1486 aa14.25□□□□□ -0.13
AP003354.1-201ENST00000523791 ABCA10Q8WWZ4 1543 aa14.24□□□□□ -0.13
AP003354.1-201ENST00000523791 KIF27Q86VH2 1401 aa14.23□□□□□ -0.13
AP003354.1-201ENST00000523791 WDR97A6NE52 1622 aa14.2□□□□□ -0.14
AP003354.1-201ENST00000523791 RAD54L2Q9Y4B4 1467 aa14.18□□□□□ -0.14
AP003354.1-201ENST00000523791 TARBP1Q13395 1621 aaKnown RBP14.16□□□□□ -0.14
AP003354.1-201ENST00000523791 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
AP003354.1-201ENST00000523791 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
AP003354.1-201ENST00000523791 TDRD9Q8NDG6 1382 aaKnown RBP14.11□□□□□ -0.15
AP003354.1-201ENST00000523791 FOXD1Q16676 465 aa14.09□□□□□ -0.15
AP003354.1-201ENST00000523791 ERICH3Q5RHP9 1530 aa14.09□□□□□ -0.15
AP003354.1-201ENST00000523791 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.15
AP003354.1-201ENST00000523791 GRIN2BQ13224 1484 aa14.08□□□□□ -0.16
AP003354.1-201ENST00000523791 IGF1RP08069 1367 aa14.08□□□□□ -0.16
AP003354.1-201ENST00000523791 FAM9AQ8IZU1 332 aaPredicted RBP14.07□□□□□ -0.16
AP003354.1-201ENST00000523791 RUSC2Q8N2Y8 1516 aa14.06□□□□□ -0.16
AP003354.1-201ENST00000523791 ZNF608Q9ULD9 1512 aaPredicted RBP14.06□□□□□ -0.16
AP003354.1-201ENST00000523791 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.16
AP003354.1-201ENST00000523791 CARMIL1Q5VZK9 1371 aa14.03□□□□□ -0.16
AP003354.1-201ENST00000523791 EIF4G3O43432 1585 aaKnown RBP14.03□□□□□ -0.16
AP003354.1-201ENST00000523791 CUL7Q14999 1698 aa14.01□□□□□ -0.17
AP003354.1-201ENST00000523791 MAGI1Q96QZ7 1491 aaPredicted RBP14.01□□□□□ -0.17
AP003354.1-201ENST00000523791 PRXQ9BXM0 1461 aa14.01□□□□□ -0.17
AP003354.1-201ENST00000523791 FHAD1B1AJZ9 1412 aa14□□□□□ -0.17
AP003354.1-201ENST00000523791 KIF21BO75037 1637 aa13.99□□□□□ -0.17
AP003354.1-201ENST00000523791 RAPGEF2Q9Y4G8 1499 aa13.99□□□□□ -0.17
AP003354.1-201ENST00000523791 GOLGA3Q08378 1498 aa13.97□□□□□ -0.17
AP003354.1-201ENST00000523791 PBRM1Q86U86 1689 aa13.97□□□□□ -0.17
AP003354.1-201ENST00000523791 SNAPC4Q5SXM2 1469 aa13.95□□□□□ -0.18
AP003354.1-201ENST00000523791 SYNJ2O15056 1496 aa13.93□□□□□ -0.18
AP003354.1-201ENST00000523791 ADAMTS12P58397 1594 aa13.93□□□□□ -0.18
AP003354.1-201ENST00000523791 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
AP003354.1-201ENST00000523791 UBTFP17480 764 aaKnown RBP13.9□□□□□ -0.18
AP003354.1-201ENST00000523791 TNIKQ9UKE5 1360 aa13.89□□□□□ -0.19
AP003354.1-201ENST00000523791 PPP6R1Q9UPN7 881 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms