RNA–Protein interactions for RNA: ENST00000523770.1

TMPRSS4-215, Transcript of transmembrane serine protease 4, humanhuman

TSL 3

Gene TMPRSS4, Length 480 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-215ENST00000523770 NISCHQ9Y2I1 1504 aa27.42■■□□□ 1.98
TMPRSS4-215ENST00000523770 ABCC9O60706 1549 aa25.74■■□□□ 1.71
TMPRSS4-215ENST00000523770 DNAJC5BQ9UF47 199 aa24.94■■□□□ 1.58
TMPRSS4-215ENST00000523770 CCDC180Q9P1Z9 1646 aa24.84■■□□□ 1.57
TMPRSS4-215ENST00000523770 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
TMPRSS4-215ENST00000523770 PABPN1Q86U42 306 aaKnown RBP eCLIP23.89■■□□□ 1.41
TMPRSS4-215ENST00000523770 NACADO15069 1562 aa23.74■■□□□ 1.39
TMPRSS4-215ENST00000523770 DCAF8L2P0C7V8 631 aa23.52■■□□□ 1.36
TMPRSS4-215ENST00000523770 BICRAQ9NZM4 1560 aa23.45■■□□□ 1.34
TMPRSS4-215ENST00000523770 DNAJC5Q9H3Z4 198 aa23.45■■□□□ 1.34
TMPRSS4-215ENST00000523770 UNC13AQ9UPW8 1703 aa23.42■■□□□ 1.34
TMPRSS4-215ENST00000523770 CECR2Q9BXF3 1484 aa23.28■■□□□ 1.32
TMPRSS4-215ENST00000523770 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
TMPRSS4-215ENST00000523770 CC2D2AQ9P2K1 1620 aa23.16■■□□□ 1.3
TMPRSS4-215ENST00000523770 SHROOM4Q9ULL8 1493 aa23.05■■□□□ 1.28
TMPRSS4-215ENST00000523770 EIF4G1Q04637 1599 aaKnown RBP22.94■■□□□ 1.26
TMPRSS4-215ENST00000523770 SCRIBQ14160 1630 aa22.65■■□□□ 1.22
TMPRSS4-215ENST00000523770 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
TMPRSS4-215ENST00000523770 ZCCHC6Q5VYS8 1495 aaKnown RBP22.57■■□□□ 1.2
TMPRSS4-215ENST00000523770 CUX2O14529 1486 aa22.5■■□□□ 1.19
TMPRSS4-215ENST00000523770 ERCC6Q03468 1493 aa22.27■■□□□ 1.16
TMPRSS4-215ENST00000523770 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
TMPRSS4-215ENST00000523770 NCAPD3P42695 1498 aa21.99■■□□□ 1.11
TMPRSS4-215ENST00000523770 NESP48681 1621 aa21.89■■□□□ 1.09
TMPRSS4-215ENST00000523770 ATAD2BQ9ULI0 1458 aa21.81■■□□□ 1.08
TMPRSS4-215ENST00000523770 THOC2Q8NI27 1593 aaKnown RBP21.78■■□□□ 1.08
TMPRSS4-215ENST00000523770 HMGXB3Q12766 1538 aa21.7■■□□□ 1.07
TMPRSS4-215ENST00000523770 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
TMPRSS4-215ENST00000523770 LAMC3Q9Y6N6 1575 aa21.55■■□□□ 1.04
TMPRSS4-215ENST00000523770 BAZ1BQ9UIG0 1483 aaKnown RBP21.53■■□□□ 1.04
TMPRSS4-215ENST00000523770 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
TMPRSS4-215ENST00000523770 PDS5BQ9NTI5 1447 aa21.51■■□□□ 1.03
TMPRSS4-215ENST00000523770 KIF21AQ7Z4S6 1674 aa21.47■■□□□ 1.03
TMPRSS4-215ENST00000523770 OSCARQ8IYS5 282 aa21.38■■□□□ 1.01
TMPRSS4-215ENST00000523770 MRC2Q9UBG0 1479 aa21.36■■□□□ 1.01
TMPRSS4-215ENST00000523770 BAZ1AQ9NRL2 1556 aaPredicted RBP21.35■■□□□ 1.01
TMPRSS4-215ENST00000523770 PEG3Q9GZU2 1588 aa21.34■■□□□ 1.01
TMPRSS4-215ENST00000523770 WDR62O43379 1518 aa21.33■■□□□ 1
TMPRSS4-215ENST00000523770 CADPSQ9ULU8 1353 aa21.3■■□□□ 1
TMPRSS4-215ENST00000523770 MROH2BQ7Z745 1585 aa21.13■□□□□ 0.97
TMPRSS4-215ENST00000523770 RIMBP3CA6NJZ7 1639 aa21.11■□□□□ 0.97
TMPRSS4-215ENST00000523770 RIMBP3BA6NNM3 1639 aa21.11■□□□□ 0.97
TMPRSS4-215ENST00000523770 RIMBP3Q9UFD9 1639 aa21.11■□□□□ 0.97
TMPRSS4-215ENST00000523770 CEP164Q9UPV0 1460 aa21.1■□□□□ 0.97
TMPRSS4-215ENST00000523770 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
TMPRSS4-215ENST00000523770 ARHGEF11O15085 1522 aa21■□□□□ 0.95
TMPRSS4-215ENST00000523770 TRHP20396 242 aaPredicted RBP20.94■□□□□ 0.94
TMPRSS4-215ENST00000523770 CYB5RLQ6IPT4 315 aa20.93■□□□□ 0.94
TMPRSS4-215ENST00000523770 URB2Q14146 1524 aaKnown RBP20.92■□□□□ 0.94
TMPRSS4-215ENST00000523770 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
TMPRSS4-215ENST00000523770 CFTRP13569 1480 aa20.88■□□□□ 0.93
TMPRSS4-215ENST00000523770 ZNF608Q9ULD9 1512 aaPredicted RBP20.8■□□□□ 0.92
TMPRSS4-215ENST00000523770 WIZO95785 1651 aa20.77■□□□□ 0.92
TMPRSS4-215ENST00000523770 ARAP1Q96P48 1450 aa20.76■□□□□ 0.91
TMPRSS4-215ENST00000523770 IFT140Q96RY7 1462 aa20.73■□□□□ 0.91
TMPRSS4-215ENST00000523770 RSF1Q96T23 1441 aaPredicted RBP20.62■□□□□ 0.89
TMPRSS4-215ENST00000523770 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
TMPRSS4-215ENST00000523770 TOPBP1Q92547 1522 aa20.53■□□□□ 0.88
TMPRSS4-215ENST00000523770 FBLN2P98095 1184 aa20.53■□□□□ 0.88
TMPRSS4-215ENST00000523770 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.88
TMPRSS4-215ENST00000523770 TOP2AP11388 1531 aaKnown RBP20.49■□□□□ 0.87
TMPRSS4-215ENST00000523770 CHD1O14646 1710 aa20.49■□□□□ 0.87
TMPRSS4-215ENST00000523770 ABCC8Q09428 1581 aa20.41■□□□□ 0.86
TMPRSS4-215ENST00000523770 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
TMPRSS4-215ENST00000523770 PRDM2Q13029 1718 aa20.37■□□□□ 0.85
TMPRSS4-215ENST00000523770 DNMBPQ6XZF7 1577 aa20.35■□□□□ 0.85
TMPRSS4-215ENST00000523770 CLASP1Q7Z460 1538 aa20.35■□□□□ 0.85
TMPRSS4-215ENST00000523770 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
TMPRSS4-215ENST00000523770 POLA1P09884 1462 aaPredicted RBP20.29■□□□□ 0.84
TMPRSS4-215ENST00000523770 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
TMPRSS4-215ENST00000523770 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
TMPRSS4-215ENST00000523770 CHMP7Q8WUX9 453 aaPredicted RBP20.26■□□□□ 0.83
TMPRSS4-215ENST00000523770 RAD54L2Q9Y4B4 1467 aa20.24■□□□□ 0.83
TMPRSS4-215ENST00000523770 SYNJ1O43426 1573 aa20.23■□□□□ 0.83
TMPRSS4-215ENST00000523770 GAPVD1Q14C86 1478 aa20.22■□□□□ 0.83
TMPRSS4-215ENST00000523770 SOGA1O94964 1423 aa20.19■□□□□ 0.82
TMPRSS4-215ENST00000523770 MAGI1Q96QZ7 1491 aaPredicted RBP20.16■□□□□ 0.82
TMPRSS4-215ENST00000523770 ILDR1Q86SU0 546 aaPredicted RBP20.15■□□□□ 0.82
TMPRSS4-215ENST00000523770 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
TMPRSS4-215ENST00000523770 GRIN2BQ13224 1484 aa20.09■□□□□ 0.81
TMPRSS4-215ENST00000523770 WDR97A6NE52 1622 aa20.09■□□□□ 0.81
TMPRSS4-215ENST00000523770 FGD5Q6ZNL6 1462 aa20.04■□□□□ 0.8
TMPRSS4-215ENST00000523770 ERCC6L2Q5T890 1561 aa19.99■□□□□ 0.79
TMPRSS4-215ENST00000523770 KDM4FA0A1W2PPD8 638 aa19.95■□□□□ 0.78
TMPRSS4-215ENST00000523770 CUX1P39880 1505 aa19.9■□□□□ 0.78
TMPRSS4-215ENST00000523770 CEP170Q5SW79 1584 aa19.86■□□□□ 0.77
TMPRSS4-215ENST00000523770 KIF13AQ9H1H9 1805 aa19.85■□□□□ 0.77
TMPRSS4-215ENST00000523770 GRIN2AQ12879 1464 aa19.83■□□□□ 0.76
TMPRSS4-215ENST00000523770 PBRM1Q86U86 1689 aa19.82■□□□□ 0.76
TMPRSS4-215ENST00000523770 FAM69CQ0P6D2 419 aa19.82■□□□□ 0.76
TMPRSS4-215ENST00000523770 NUP160Q12769 1436 aa19.82■□□□□ 0.76
TMPRSS4-215ENST00000523770 ABCC10Q5T3U5 1492 aa19.79■□□□□ 0.76
TMPRSS4-215ENST00000523770 ABCA10Q8WWZ4 1543 aa19.76■□□□□ 0.75
TMPRSS4-215ENST00000523770 ABCA5Q8WWZ7 1642 aa19.76■□□□□ 0.75
TMPRSS4-215ENST00000523770 SHROOM2Q13796 1616 aa19.75■□□□□ 0.75
TMPRSS4-215ENST00000523770 PRG4Q92954 1404 aaPredicted RBP19.68■□□□□ 0.74
TMPRSS4-215ENST00000523770 ADAMTS12P58397 1594 aa19.68■□□□□ 0.74
TMPRSS4-215ENST00000523770 KDM6BO15054 1643 aa19.68■□□□□ 0.74
TMPRSS4-215ENST00000523770 MAPKBP1O60336 1514 aa19.66■□□□□ 0.74
TMPRSS4-215ENST00000523770 DIP2BQ9P265 1576 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms