RNA–Protein interactions for RNA: ENST00000523717.5

RBPMS-220, Transcript of RNA binding protein, mRNA processing factor, humanhuman

TSL 3

Gene RBPMS, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBPMS-220ENST00000523717 NISCHQ9Y2I1 1504 aa36.9■■■■□ 3.5
RBPMS-220ENST00000523717 CCDC180Q9P1Z9 1646 aa32.97■■■□□ 2.87
RBPMS-220ENST00000523717 ABCC9O60706 1549 aa32.77■■■□□ 2.84
RBPMS-220ENST00000523717 RB1CC1Q8TDY2 1594 aa31.32■■■□□ 2.6
RBPMS-220ENST00000523717 NACADO15069 1562 aa31.17■■■□□ 2.58
RBPMS-220ENST00000523717 DCAF8L2P0C7V8 631 aa31.14■■■□□ 2.58
RBPMS-220ENST00000523717 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
RBPMS-220ENST00000523717 ZCCHC6Q5VYS8 1495 aaKnown RBP30.6■■■□□ 2.49
RBPMS-220ENST00000523717 PABPN1Q86U42 306 aaKnown RBP eCLIP30.6■■■□□ 2.49
RBPMS-220ENST00000523717 DNAJC5BQ9UF47 199 aa30.57■■■□□ 2.48
RBPMS-220ENST00000523717 DCAF1Q9Y4B6 1507 aa30.51■■■□□ 2.47
RBPMS-220ENST00000523717 UNC13AQ9UPW8 1703 aa30.5■■■□□ 2.47
RBPMS-220ENST00000523717 BICRAQ9NZM4 1560 aa30.34■■■□□ 2.45
RBPMS-220ENST00000523717 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
RBPMS-220ENST00000523717 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
RBPMS-220ENST00000523717 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
RBPMS-220ENST00000523717 CC2D2AQ9P2K1 1620 aa29.6■■■□□ 2.33
RBPMS-220ENST00000523717 CECR2Q9BXF3 1484 aa29.53■■■□□ 2.32
RBPMS-220ENST00000523717 NCAPD3P42695 1498 aa28.79■■■□□ 2.2
RBPMS-220ENST00000523717 ATAD2BQ9ULI0 1458 aa28.72■■■□□ 2.19
RBPMS-220ENST00000523717 SMARCA4P51532 1647 aa28.7■■■□□ 2.19
RBPMS-220ENST00000523717 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
RBPMS-220ENST00000523717 BAZ1AQ9NRL2 1556 aaPredicted RBP28.63■■■□□ 2.17
RBPMS-220ENST00000523717 HMGXB3Q12766 1538 aa28.56■■■□□ 2.16
RBPMS-220ENST00000523717 BAZ1BQ9UIG0 1483 aaKnown RBP28.45■■■□□ 2.14
RBPMS-220ENST00000523717 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.14
RBPMS-220ENST00000523717 MROH2BQ7Z745 1585 aa28.41■■■□□ 2.14
RBPMS-220ENST00000523717 ERCC6Q03468 1493 aa28.32■■■□□ 2.12
RBPMS-220ENST00000523717 NESP48681 1621 aa28.2■■■□□ 2.1
RBPMS-220ENST00000523717 CUX2O14529 1486 aa28.19■■■□□ 2.1
RBPMS-220ENST00000523717 LAMC3Q9Y6N6 1575 aa28.08■■■□□ 2.09
RBPMS-220ENST00000523717 WIZO95785 1651 aa28.05■■■□□ 2.08
RBPMS-220ENST00000523717 DNAJC5Q9H3Z4 198 aa27.97■■■□□ 2.07
RBPMS-220ENST00000523717 PDS5BQ9NTI5 1447 aa27.97■■■□□ 2.07
RBPMS-220ENST00000523717 CADPSQ9ULU8 1353 aa27.95■■■□□ 2.06
RBPMS-220ENST00000523717 RSF1Q96T23 1441 aaPredicted RBP27.93■■■□□ 2.06
RBPMS-220ENST00000523717 THOC2Q8NI27 1593 aaKnown RBP27.84■■■□□ 2.05
RBPMS-220ENST00000523717 KIF21AQ7Z4S6 1674 aa27.81■■■□□ 2.04
RBPMS-220ENST00000523717 TOP2AP11388 1531 aaKnown RBP27.75■■■□□ 2.03
RBPMS-220ENST00000523717 MRC2Q9UBG0 1479 aa27.65■■■□□ 2.02
RBPMS-220ENST00000523717 CFTRP13569 1480 aa27.64■■■□□ 2.02
RBPMS-220ENST00000523717 FANCD2Q9BXW9 1451 aa27.59■■■□□ 2.01
RBPMS-220ENST00000523717 CEP164Q9UPV0 1460 aa27.59■■■□□ 2.01
RBPMS-220ENST00000523717 WDR62O43379 1518 aa27.56■■■□□ 2
RBPMS-220ENST00000523717 CCDC88BA6NC98 1476 aa27.45■■□□□ 1.99
RBPMS-220ENST00000523717 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
RBPMS-220ENST00000523717 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
RBPMS-220ENST00000523717 ABCC8Q09428 1581 aa27.11■■□□□ 1.93
RBPMS-220ENST00000523717 TOPBP1Q92547 1522 aa27.08■■□□□ 1.93
RBPMS-220ENST00000523717 IFT140Q96RY7 1462 aa27.06■■□□□ 1.92
RBPMS-220ENST00000523717 OSCARQ8IYS5 282 aa27.02■■□□□ 1.92
RBPMS-220ENST00000523717 DNMBPQ6XZF7 1577 aa26.99■■□□□ 1.91
RBPMS-220ENST00000523717 ZNF608Q9ULD9 1512 aaPredicted RBP26.94■■□□□ 1.9
RBPMS-220ENST00000523717 SUPT5HO00267 1087 aaKnown RBP26.91■■□□□ 1.9
RBPMS-220ENST00000523717 POLA1P09884 1462 aaPredicted RBP26.81■■□□□ 1.88
RBPMS-220ENST00000523717 TRIM41Q8WV44 630 aa26.81■■□□□ 1.88
RBPMS-220ENST00000523717 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
RBPMS-220ENST00000523717 EIF4G3O43432 1585 aaKnown RBP26.78■■□□□ 1.88
RBPMS-220ENST00000523717 AQRO60306 1485 aaKnown RBP eCLIP26.76■■□□□ 1.873e-6■■■■□ 25.5
RBPMS-220ENST00000523717 SOGA1O94964 1423 aa26.75■■□□□ 1.87
RBPMS-220ENST00000523717 RAD54L2Q9Y4B4 1467 aa26.71■■□□□ 1.87
RBPMS-220ENST00000523717 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
RBPMS-220ENST00000523717 CUX1P39880 1505 aa26.67■■□□□ 1.86
RBPMS-220ENST00000523717 TDRD9Q8NDG6 1382 aaKnown RBP26.65■■□□□ 1.86
RBPMS-220ENST00000523717 FBLN2P98095 1184 aa26.6■■□□□ 1.85
RBPMS-220ENST00000523717 WDR97A6NE52 1622 aa26.58■■□□□ 1.85
RBPMS-220ENST00000523717 CHD1O14646 1710 aa26.51■■□□□ 1.83
RBPMS-220ENST00000523717 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
RBPMS-220ENST00000523717 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
RBPMS-220ENST00000523717 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
RBPMS-220ENST00000523717 ARHGEF11O15085 1522 aa26.47■■□□□ 1.83
RBPMS-220ENST00000523717 GRIN2BQ13224 1484 aa26.47■■□□□ 1.83
RBPMS-220ENST00000523717 SNAPC4Q5SXM2 1469 aa26.47■■□□□ 1.83
RBPMS-220ENST00000523717 CHMP7Q8WUX9 453 aaPredicted RBP26.46■■□□□ 1.83
RBPMS-220ENST00000523717 MAGI1Q96QZ7 1491 aaPredicted RBP26.45■■□□□ 1.82
RBPMS-220ENST00000523717 ABCA10Q8WWZ4 1543 aa26.41■■□□□ 1.82
RBPMS-220ENST00000523717 GAPVD1Q14C86 1478 aa26.41■■□□□ 1.82
RBPMS-220ENST00000523717 WRNQ14191 1432 aaPredicted RBP eCLIP26.39■■□□□ 1.81
RBPMS-220ENST00000523717 CYB5RLQ6IPT4 315 aa26.35■■□□□ 1.81
RBPMS-220ENST00000523717 SYNJ2O15056 1496 aa26.35■■□□□ 1.81
RBPMS-220ENST00000523717 TOP2BQ02880 1626 aa26.32■■□□□ 1.8
RBPMS-220ENST00000523717 SYNJ1O43426 1573 aa26.3■■□□□ 1.8
RBPMS-220ENST00000523717 ABCA5Q8WWZ7 1642 aa26.29■■□□□ 1.8
RBPMS-220ENST00000523717 BIVM-ERCC5R4GMW8 1640 aa26.29■■□□□ 1.8
RBPMS-220ENST00000523717 PBRM1Q86U86 1689 aa26.29■■□□□ 1.8
RBPMS-220ENST00000523717 CLASP1Q7Z460 1538 aa26.25■■□□□ 1.79
RBPMS-220ENST00000523717 ARAP1Q96P48 1450 aa26.22■■□□□ 1.79
RBPMS-220ENST00000523717 GRIN2AQ12879 1464 aa26.11■■□□□ 1.77
RBPMS-220ENST00000523717 FHAD1B1AJZ9 1412 aa26.1■■□□□ 1.77
RBPMS-220ENST00000523717 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
RBPMS-220ENST00000523717 ADAMTS12P58397 1594 aa26.07■■□□□ 1.76
RBPMS-220ENST00000523717 NUP160Q12769 1436 aa26.02■■□□□ 1.76
RBPMS-220ENST00000523717 AEBP2Q6ZN18 517 aaPredicted RBP26■■□□□ 1.75
RBPMS-220ENST00000523717 TRHP20396 242 aaPredicted RBP25.99■■□□□ 1.75
RBPMS-220ENST00000523717 CEP170Q5SW79 1584 aa25.96■■□□□ 1.75
RBPMS-220ENST00000523717 KIF27Q86VH2 1401 aa25.88■■□□□ 1.73
RBPMS-220ENST00000523717 ERCC6L2Q5T890 1561 aa25.84■■□□□ 1.73
RBPMS-220ENST00000523717 SHROOM2Q13796 1616 aa25.84■■□□□ 1.73
RBPMS-220ENST00000523717 IGF1RP08069 1367 aa25.83■■□□□ 1.73
RBPMS-220ENST00000523717 JPH4Q96JJ6 628 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms