RNA–Protein interactions for RNA: ENST00000523688.1

NKD2-205, Transcript of naked cuticle homolog 2, humanhuman

TSL 3

Gene NKD2, Length 872 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKD2-205ENST00000523688 NISCHQ9Y2I1 1504 aa40.94■■■■■ 4.14
NKD2-205ENST00000523688 CCDC180Q9P1Z9 1646 aa36.52■■■■□ 3.44
NKD2-205ENST00000523688 ABCC9O60706 1549 aa36.34■■■■□ 3.41
NKD2-205ENST00000523688 RB1CC1Q8TDY2 1594 aa34.67■■■■□ 3.14
NKD2-205ENST00000523688 DCAF8L2P0C7V8 631 aa34.65■■■■□ 3.14
NKD2-205ENST00000523688 NACADO15069 1562 aa34.49■■■■□ 3.11
NKD2-205ENST00000523688 MYO15BQ96JP2 1530 aa34.06■■■■□ 3.04
NKD2-205ENST00000523688 ZCCHC6Q5VYS8 1495 aaKnown RBP33.97■■■■□ 3.03
NKD2-205ENST00000523688 PABPN1Q86U42 306 aaKnown RBP eCLIP33.95■■■■□ 3.03
NKD2-205ENST00000523688 UNC13AQ9UPW8 1703 aa33.82■■■■□ 3
NKD2-205ENST00000523688 DNAJC5BQ9UF47 199 aa33.77■■■■□ 3
NKD2-205ENST00000523688 DCAF1Q9Y4B6 1507 aa33.77■■■■□ 3
NKD2-205ENST00000523688 BICRAQ9NZM4 1560 aa33.6■■■□□ 2.97
NKD2-205ENST00000523688 SCRIBQ14160 1630 aa33.41■■■□□ 2.94
NKD2-205ENST00000523688 SHROOM4Q9ULL8 1493 aa33.15■■■□□ 2.9
NKD2-205ENST00000523688 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
NKD2-205ENST00000523688 CC2D2AQ9P2K1 1620 aa32.78■■■□□ 2.84
NKD2-205ENST00000523688 CECR2Q9BXF3 1484 aa32.67■■■□□ 2.82
NKD2-205ENST00000523688 SMARCA4P51532 1647 aa31.85■■■□□ 2.69
NKD2-205ENST00000523688 NCAPD3P42695 1498 aa31.84■■■□□ 2.69
NKD2-205ENST00000523688 ATAD2BQ9ULI0 1458 aa31.82■■■□□ 2.68
NKD2-205ENST00000523688 BAZ1AQ9NRL2 1556 aaPredicted RBP31.77■■■□□ 2.68
NKD2-205ENST00000523688 SMARCA2P51531 1590 aa31.74■■■□□ 2.67
NKD2-205ENST00000523688 HMGXB3Q12766 1538 aa31.61■■■□□ 2.65
NKD2-205ENST00000523688 BAZ1BQ9UIG0 1483 aaKnown RBP31.57■■■□□ 2.64
NKD2-205ENST00000523688 MROH2BQ7Z745 1585 aa31.56■■■□□ 2.64
NKD2-205ENST00000523688 PEG3Q9GZU2 1588 aa31.48■■■□□ 2.63
NKD2-205ENST00000523688 ERCC6Q03468 1493 aa31.38■■■□□ 2.61
NKD2-205ENST00000523688 NESP48681 1621 aa31.28■■■□□ 2.6
NKD2-205ENST00000523688 WIZO95785 1651 aa31.2■■■□□ 2.59
NKD2-205ENST00000523688 CUX2O14529 1486 aa31.1■■■□□ 2.57
NKD2-205ENST00000523688 LAMC3Q9Y6N6 1575 aa31.07■■■□□ 2.56
NKD2-205ENST00000523688 RSF1Q96T23 1441 aaPredicted RBP31.05■■■□□ 2.56
NKD2-205ENST00000523688 PDS5BQ9NTI5 1447 aa30.95■■■□□ 2.54
NKD2-205ENST00000523688 CADPSQ9ULU8 1353 aa30.94■■■□□ 2.54
NKD2-205ENST00000523688 KIF21AQ7Z4S6 1674 aa30.84■■■□□ 2.53
NKD2-205ENST00000523688 THOC2Q8NI27 1593 aaKnown RBP30.83■■■□□ 2.53
NKD2-205ENST00000523688 TOP2AP11388 1531 aaKnown RBP30.82■■■□□ 2.52
NKD2-205ENST00000523688 DNAJC5Q9H3Z4 198 aa30.77■■■□□ 2.52
NKD2-205ENST00000523688 MRC2Q9UBG0 1479 aa30.63■■■□□ 2.49
NKD2-205ENST00000523688 CFTRP13569 1480 aa30.62■■■□□ 2.49
NKD2-205ENST00000523688 FANCD2Q9BXW9 1451 aa30.59■■■□□ 2.49
NKD2-205ENST00000523688 CEP164Q9UPV0 1460 aa30.59■■■□□ 2.49
NKD2-205ENST00000523688 CCDC88BA6NC98 1476 aa30.5■■■□□ 2.47
NKD2-205ENST00000523688 WDR62O43379 1518 aa30.5■■■□□ 2.47
NKD2-205ENST00000523688 URB2Q14146 1524 aaKnown RBP30.29■■■□□ 2.44
NKD2-205ENST00000523688 PRDM2Q13029 1718 aa30.27■■■□□ 2.44
NKD2-205ENST00000523688 SUPT5HO00267 1087 aaKnown RBP30.09■■■□□ 2.41
NKD2-205ENST00000523688 TOPBP1Q92547 1522 aa30.03■■■□□ 2.4
NKD2-205ENST00000523688 ABCC8Q09428 1581 aa29.99■■■□□ 2.39
NKD2-205ENST00000523688 IFT140Q96RY7 1462 aa29.95■■■□□ 2.39
NKD2-205ENST00000523688 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
NKD2-205ENST00000523688 ZNF608Q9ULD9 1512 aaPredicted RBP29.89■■■□□ 2.38
NKD2-205ENST00000523688 OSCARQ8IYS5 282 aa29.84■■■□□ 2.37
NKD2-205ENST00000523688 POLA1P09884 1462 aaPredicted RBP29.74■■■□□ 2.35
NKD2-205ENST00000523688 EIF4G3O43432 1585 aaKnown RBP29.71■■■□□ 2.35
NKD2-205ENST00000523688 TARBP1Q13395 1621 aaKnown RBP29.7■■■□□ 2.34
NKD2-205ENST00000523688 AQRO60306 1485 aaKnown RBP eCLIP29.69■■■□□ 2.34
NKD2-205ENST00000523688 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
NKD2-205ENST00000523688 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
NKD2-205ENST00000523688 SOGA1O94964 1423 aa29.67■■■□□ 2.34
NKD2-205ENST00000523688 CUX1P39880 1505 aa29.63■■■□□ 2.33
NKD2-205ENST00000523688 FGD5Q6ZNL6 1462 aa29.62■■■□□ 2.33
NKD2-205ENST00000523688 TDRD9Q8NDG6 1382 aaKnown RBP29.59■■■□□ 2.33
NKD2-205ENST00000523688 FBLN2P98095 1184 aa29.54■■■□□ 2.32
NKD2-205ENST00000523688 CHD1O14646 1710 aa29.42■■■□□ 2.3
NKD2-205ENST00000523688 WDR97A6NE52 1622 aa29.39■■■□□ 2.3
NKD2-205ENST00000523688 SNAPC4Q5SXM2 1469 aa29.37■■■□□ 2.29
NKD2-205ENST00000523688 GRIN2BQ13224 1484 aa29.34■■■□□ 2.29
NKD2-205ENST00000523688 CHMP7Q8WUX9 453 aaPredicted RBP29.33■■■□□ 2.29
NKD2-205ENST00000523688 RIMBP3CA6NJZ7 1639 aa29.33■■■□□ 2.29
NKD2-205ENST00000523688 RIMBP3BA6NNM3 1639 aa29.33■■■□□ 2.29
NKD2-205ENST00000523688 RIMBP3Q9UFD9 1639 aa29.33■■■□□ 2.29
NKD2-205ENST00000523688 WRNQ14191 1432 aaPredicted RBP eCLIP29.3■■■□□ 2.28
NKD2-205ENST00000523688 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
NKD2-205ENST00000523688 ARHGEF11O15085 1522 aa29.29■■■□□ 2.28
NKD2-205ENST00000523688 MAGI1Q96QZ7 1491 aaPredicted RBP29.28■■■□□ 2.28
NKD2-205ENST00000523688 ABCA10Q8WWZ4 1543 aa29.27■■■□□ 2.28
NKD2-205ENST00000523688 TOP2BQ02880 1626 aa29.23■■■□□ 2.27
NKD2-205ENST00000523688 SYNJ1O43426 1573 aa29.23■■■□□ 2.27
NKD2-205ENST00000523688 BIVM-ERCC5R4GMW8 1640 aa29.2■■■□□ 2.27
NKD2-205ENST00000523688 PBRM1Q86U86 1689 aa29.2■■■□□ 2.26
NKD2-205ENST00000523688 SYNJ2O15056 1496 aa29.19■■■□□ 2.26
NKD2-205ENST00000523688 ABCA5Q8WWZ7 1642 aa29.17■■■□□ 2.26
NKD2-205ENST00000523688 CYB5RLQ6IPT4 315 aa29.17■■■□□ 2.26
NKD2-205ENST00000523688 CLASP1Q7Z460 1538 aa29.07■■■□□ 2.24
NKD2-205ENST00000523688 ARAP1Q96P48 1450 aa29.02■■■□□ 2.24
NKD2-205ENST00000523688 GRIN2AQ12879 1464 aa28.95■■■□□ 2.22
NKD2-205ENST00000523688 ADAMTS12P58397 1594 aa28.95■■■□□ 2.22
NKD2-205ENST00000523688 FHAD1B1AJZ9 1412 aa28.93■■■□□ 2.22
NKD2-205ENST00000523688 ERICH3Q5RHP9 1530 aa28.91■■■□□ 2.22
NKD2-205ENST00000523688 CEP170Q5SW79 1584 aa28.81■■■□□ 2.2
NKD2-205ENST00000523688 NUP160Q12769 1436 aa28.81■■■□□ 2.2
NKD2-205ENST00000523688 TRHP20396 242 aaPredicted RBP28.79■■■□□ 2.2
NKD2-205ENST00000523688 KIF27Q86VH2 1401 aa28.74■■■□□ 2.19
NKD2-205ENST00000523688 ERCC6L2Q5T890 1561 aa28.68■■■□□ 2.18
NKD2-205ENST00000523688 IGF1RP08069 1367 aa28.67■■■□□ 2.18
NKD2-205ENST00000523688 JPH4Q96JJ6 628 aa28.61■■■□□ 2.17
NKD2-205ENST00000523688 SHROOM2Q13796 1616 aa28.61■■■□□ 2.17
NKD2-205ENST00000523688 PRG4Q92954 1404 aaPredicted RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms