RNA–Protein interactions for RNA: ENST00000523669.5

LRRCC1-206, Transcript of leucine rich repeat and coiled-coil centrosomal protein 1, humanhuman

TSL 1 (best)

Gene LRRCC1, Length 1,004 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1-206ENST00000523669 NISCHQ9Y2I1 1504 aa55.95■■■■■ 6.55
LRRCC1-206ENST00000523669 CCDC180Q9P1Z9 1646 aa49.94■■■■■ 5.59
LRRCC1-206ENST00000523669 ABCC9O60706 1549 aa49.19■■■■■ 5.47
LRRCC1-206ENST00000523669 RB1CC1Q8TDY2 1594 aa47.16■■■■■ 5.14
LRRCC1-206ENST00000523669 NACADO15069 1562 aa47.04■■■■■ 5.12
LRRCC1-206ENST00000523669 DCAF8L2P0C7V8 631 aa46.73■■■■■ 5.07
LRRCC1-206ENST00000523669 MYO15BQ96JP2 1530 aa46.69■■■■■ 5.06
LRRCC1-206ENST00000523669 ZCCHC6Q5VYS8 1495 aaKnown RBP46.53■■■■■ 5.04
LRRCC1-206ENST00000523669 DCAF1Q9Y4B6 1507 aa46.31■■■■■ 5
LRRCC1-206ENST00000523669 UNC13AQ9UPW8 1703 aa46.14■■■■■ 4.98
LRRCC1-206ENST00000523669 PABPN1Q86U42 306 aaKnown RBP eCLIP45.87■■■■■ 4.93
LRRCC1-206ENST00000523669 BICRAQ9NZM4 1560 aa45.83■■■■■ 4.93
LRRCC1-206ENST00000523669 DNAJC5BQ9UF47 199 aa45.59■■■■■ 4.89
LRRCC1-206ENST00000523669 SCRIBQ14160 1630 aa45.47■■■■■ 4.87
LRRCC1-206ENST00000523669 SHROOM4Q9ULL8 1493 aa45.29■■■■■ 4.84
LRRCC1-206ENST00000523669 EIF4G1Q04637 1599 aaKnown RBP44.6■■■■■ 4.73
LRRCC1-206ENST00000523669 CC2D2AQ9P2K1 1620 aa44.52■■■■■ 4.72
LRRCC1-206ENST00000523669 CECR2Q9BXF3 1484 aa44.27■■■■■ 4.68
LRRCC1-206ENST00000523669 SMARCA4P51532 1647 aa43.5■■■■■ 4.55
LRRCC1-206ENST00000523669 NCAPD3P42695 1498 aa43.43■■■■■ 4.54
LRRCC1-206ENST00000523669 ATAD2BQ9ULI0 1458 aa43.37■■■■■ 4.53
LRRCC1-206ENST00000523669 BAZ1AQ9NRL2 1556 aaPredicted RBP43.37■■■■■ 4.53
LRRCC1-206ENST00000523669 SMARCA2P51531 1590 aa43.29■■■■■ 4.52
LRRCC1-206ENST00000523669 HMGXB3Q12766 1538 aa43.17■■■■■ 4.5
LRRCC1-206ENST00000523669 PEG3Q9GZU2 1588 aa43.13■■■■■ 4.5
LRRCC1-206ENST00000523669 MROH2BQ7Z745 1585 aa43.11■■■■■ 4.49
LRRCC1-206ENST00000523669 BAZ1BQ9UIG0 1483 aaKnown RBP42.95■■■■■ 4.47
LRRCC1-206ENST00000523669 WIZO95785 1651 aa42.6■■■■■ 4.41
LRRCC1-206ENST00000523669 NESP48681 1621 aa42.48■■■■■ 4.39
LRRCC1-206ENST00000523669 RSF1Q96T23 1441 aaPredicted RBP42.46■■■■■ 4.39
LRRCC1-206ENST00000523669 ERCC6Q03468 1493 aa42.4■■■■■ 4.38
LRRCC1-206ENST00000523669 LAMC3Q9Y6N6 1575 aa42.33■■■■■ 4.37
LRRCC1-206ENST00000523669 CUX2O14529 1486 aa42.18■■■■■ 4.34
LRRCC1-206ENST00000523669 TOP2AP11388 1531 aaKnown RBP42.14■■■■■ 4.34
LRRCC1-206ENST00000523669 CADPSQ9ULU8 1353 aa42.11■■■■■ 4.33
LRRCC1-206ENST00000523669 PDS5BQ9NTI5 1447 aa42.02■■■■■ 4.32
LRRCC1-206ENST00000523669 KIF21AQ7Z4S6 1674 aa41.97■■■■■ 4.31
LRRCC1-206ENST00000523669 THOC2Q8NI27 1593 aaKnown RBP41.97■■■■■ 4.31
LRRCC1-206ENST00000523669 CFTRP13569 1480 aa41.79■■■■■ 4.28
LRRCC1-206ENST00000523669 CCDC88BA6NC98 1476 aa41.63■■■■■ 4.25
LRRCC1-206ENST00000523669 MRC2Q9UBG0 1479 aa41.63■■■■■ 4.25
LRRCC1-206ENST00000523669 FANCD2Q9BXW9 1451 aa41.61■■■■■ 4.25
LRRCC1-206ENST00000523669 CEP164Q9UPV0 1460 aa41.59■■■■■ 4.25
LRRCC1-206ENST00000523669 WDR62O43379 1518 aa41.54■■■■■ 4.24
LRRCC1-206ENST00000523669 PRDM2Q13029 1718 aa41.44■■■■■ 4.22
LRRCC1-206ENST00000523669 DNAJC5Q9H3Z4 198 aa41.37■■■■■ 4.21
LRRCC1-206ENST00000523669 URB2Q14146 1524 aaKnown RBP41.25■■■■■ 4.19
LRRCC1-206ENST00000523669 SUPT5HO00267 1087 aaKnown RBP40.93■■■■■ 4.14
LRRCC1-206ENST00000523669 TOPBP1Q92547 1522 aa40.92■■■■■ 4.14
LRRCC1-206ENST00000523669 ABCC8Q09428 1581 aa40.88■■■■■ 4.13
LRRCC1-206ENST00000523669 DNMBPQ6XZF7 1577 aa40.83■■■■■ 4.13
LRRCC1-206ENST00000523669 IFT140Q96RY7 1462 aa40.75■■■■■ 4.11
LRRCC1-206ENST00000523669 ZNF608Q9ULD9 1512 aaPredicted RBP40.62■■■■■ 4.09
LRRCC1-206ENST00000523669 POLA1P09884 1462 aaPredicted RBP40.54■■■■■ 4.08
LRRCC1-206ENST00000523669 TARBP1Q13395 1621 aaKnown RBP40.53■■■■■ 4.08
LRRCC1-206ENST00000523669 CUX1P39880 1505 aa40.47■■■■■ 4.07
LRRCC1-206ENST00000523669 EIF4G3O43432 1585 aaKnown RBP40.44■■■■■ 4.06
LRRCC1-206ENST00000523669 FGD5Q6ZNL6 1462 aa40.37■■■■■ 4.05
LRRCC1-206ENST00000523669 RAD54L2Q9Y4B4 1467 aa40.35■■■■■ 4.05
LRRCC1-206ENST00000523669 SOGA1O94964 1423 aa40.33■■■■■ 4.05
LRRCC1-206ENST00000523669 AQRO60306 1485 aaKnown RBP eCLIP40.31■■■■■ 4.04
LRRCC1-206ENST00000523669 OSCARQ8IYS5 282 aa40.29■■■■■ 4.04
LRRCC1-206ENST00000523669 WDR97A6NE52 1622 aa40.19■■■■■ 4.02
LRRCC1-206ENST00000523669 TDRD9Q8NDG6 1382 aaKnown RBP40.15■■■■■ 4.02
LRRCC1-206ENST00000523669 BIVM-ERCC5R4GMW8 1640 aa40.02■■■■■ 4
LRRCC1-206ENST00000523669 WRNQ14191 1432 aaPredicted RBP eCLIP40.01■■■■■ 4
LRRCC1-206ENST00000523669 CHD1O14646 1710 aa40■■■■□ 3.99
LRRCC1-206ENST00000523669 TOP2BQ02880 1626 aa40■■■■□ 3.99
LRRCC1-206ENST00000523669 ABCA10Q8WWZ4 1543 aa39.99■■■■□ 3.99
LRRCC1-206ENST00000523669 SYNJ1O43426 1573 aa39.97■■■■□ 3.99
LRRCC1-206ENST00000523669 SNAPC4Q5SXM2 1469 aa39.94■■■■□ 3.98
LRRCC1-206ENST00000523669 GRIN2BQ13224 1484 aa39.93■■■■□ 3.98
LRRCC1-206ENST00000523669 MAGI1Q96QZ7 1491 aaPredicted RBP39.88■■■■□ 3.98
LRRCC1-206ENST00000523669 GAPVD1Q14C86 1478 aa39.88■■■■□ 3.97
LRRCC1-206ENST00000523669 ABCA5Q8WWZ7 1642 aa39.87■■■■□ 3.97
LRRCC1-206ENST00000523669 PBRM1Q86U86 1689 aa39.83■■■■□ 3.97
LRRCC1-206ENST00000523669 FBLN2P98095 1184 aa39.8■■■■□ 3.96
LRRCC1-206ENST00000523669 RIMBP3CA6NJZ7 1639 aa39.75■■■■□ 3.95
LRRCC1-206ENST00000523669 RIMBP3BA6NNM3 1639 aa39.75■■■■□ 3.95
LRRCC1-206ENST00000523669 RIMBP3Q9UFD9 1639 aa39.75■■■■□ 3.95
LRRCC1-206ENST00000523669 SYNJ2O15056 1496 aa39.73■■■■□ 3.95
LRRCC1-206ENST00000523669 TRIM41Q8WV44 630 aa39.71■■■■□ 3.95
LRRCC1-206ENST00000523669 ARHGEF11O15085 1522 aa39.7■■■■□ 3.95
LRRCC1-206ENST00000523669 CHMP7Q8WUX9 453 aaPredicted RBP39.67■■■■□ 3.94
LRRCC1-206ENST00000523669 CLASP1Q7Z460 1538 aa39.6■■■■□ 3.93
LRRCC1-206ENST00000523669 ADAMTS12P58397 1594 aa39.51■■■■□ 3.92
LRRCC1-206ENST00000523669 ERICH3Q5RHP9 1530 aa39.49■■■■□ 3.91
LRRCC1-206ENST00000523669 GRIN2AQ12879 1464 aa39.43■■■■□ 3.9
LRRCC1-206ENST00000523669 FHAD1B1AJZ9 1412 aa39.4■■■■□ 3.9
LRRCC1-206ENST00000523669 ARAP1Q96P48 1450 aa39.37■■■■□ 3.89
LRRCC1-206ENST00000523669 NUP160Q12769 1436 aa39.31■■■■□ 3.88
LRRCC1-206ENST00000523669 CYB5RLQ6IPT4 315 aa39.28■■■■□ 3.88
LRRCC1-206ENST00000523669 CEP170Q5SW79 1584 aa39.26■■■■□ 3.88
LRRCC1-206ENST00000523669 KIF27Q86VH2 1401 aa39.2■■■■□ 3.87
LRRCC1-206ENST00000523669 IGF1RP08069 1367 aa39.12■■■■□ 3.85
LRRCC1-206ENST00000523669 SHROOM2Q13796 1616 aa39.07■■■■□ 3.84
LRRCC1-206ENST00000523669 CUL7Q14999 1698 aa39.03■■■■□ 3.84
LRRCC1-206ENST00000523669 ERCC6L2Q5T890 1561 aa39■■■■□ 3.83
LRRCC1-206ENST00000523669 RUSC2Q8N2Y8 1516 aa38.94■■■■□ 3.82
LRRCC1-206ENST00000523669 CARMIL1Q5VZK9 1371 aa38.85■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms