RNA–Protein interactions for RNA: ENST00000523660.1

GEM-205, Transcript of GTP binding protein overexpressed in skeletal muscle, humanhuman

TSL 2

Gene GEM, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEM-205ENST00000523660 NISCHQ9Y2I1 1504 aa43.73■■■■■ 4.59
GEM-205ENST00000523660 ABCC9O60706 1549 aa40.23■■■■■ 4.03
GEM-205ENST00000523660 CCDC180Q9P1Z9 1646 aa39.53■■■■□ 3.92
GEM-205ENST00000523660 DNAJC5BQ9UF47 199 aa38.36■■■■□ 3.73
GEM-205ENST00000523660 RB1CC1Q8TDY2 1594 aa37.96■■■■□ 3.67
GEM-205ENST00000523660 NACADO15069 1562 aa37.52■■■■□ 3.6
GEM-205ENST00000523660 PABPN1Q86U42 306 aaKnown RBP eCLIP37.34■■■■□ 3.57
GEM-205ENST00000523660 DCAF8L2P0C7V8 631 aa37.18■■■■□ 3.54
GEM-205ENST00000523660 UNC13AQ9UPW8 1703 aa37.13■■■■□ 3.53
GEM-205ENST00000523660 BICRAQ9NZM4 1560 aa36.92■■■■□ 3.5
GEM-205ENST00000523660 MYO15BQ96JP2 1530 aa36.78■■■■□ 3.48
GEM-205ENST00000523660 CECR2Q9BXF3 1484 aa36.31■■■■□ 3.4
GEM-205ENST00000523660 CC2D2AQ9P2K1 1620 aa36.3■■■■□ 3.4
GEM-205ENST00000523660 SHROOM4Q9ULL8 1493 aa36.3■■■■□ 3.4
GEM-205ENST00000523660 ZCCHC6Q5VYS8 1495 aaKnown RBP36.11■■■■□ 3.37
GEM-205ENST00000523660 DCAF1Q9Y4B6 1507 aa36.06■■■■□ 3.36
GEM-205ENST00000523660 EIF4G1Q04637 1599 aaKnown RBP36.06■■■■□ 3.36
GEM-205ENST00000523660 SCRIBQ14160 1630 aa36.01■■■■□ 3.36
GEM-205ENST00000523660 DNAJC5Q9H3Z4 198 aa35.68■■■■□ 3.3
GEM-205ENST00000523660 CUX2O14529 1486 aa34.93■■■■□ 3.18
GEM-205ENST00000523660 ERCC6Q03468 1493 aa34.77■■■■□ 3.16
GEM-205ENST00000523660 NCAPD3P42695 1498 aa34.66■■■■□ 3.14
GEM-205ENST00000523660 ATAD2BQ9ULI0 1458 aa34.48■■■■□ 3.11
GEM-205ENST00000523660 NESP48681 1621 aa34.38■■■■□ 3.09
GEM-205ENST00000523660 HMGXB3Q12766 1538 aa34.35■■■■□ 3.09
GEM-205ENST00000523660 SMARCA2P51531 1590 aa34.32■■■■□ 3.08
GEM-205ENST00000523660 SMARCA4P51532 1647 aa34.27■■■■□ 3.08
GEM-205ENST00000523660 THOC2Q8NI27 1593 aaKnown RBP34.17■■■■□ 3.06
GEM-205ENST00000523660 BAZ1BQ9UIG0 1483 aaKnown RBP34.1■■■■□ 3.05
GEM-205ENST00000523660 LAMC3Q9Y6N6 1575 aa33.98■■■■□ 3.03
GEM-205ENST00000523660 BAZ1AQ9NRL2 1556 aaPredicted RBP33.98■■■■□ 3.03
GEM-205ENST00000523660 PEG3Q9GZU2 1588 aa33.94■■■■□ 3.02
GEM-205ENST00000523660 KIF21AQ7Z4S6 1674 aa33.9■■■■□ 3.02
GEM-205ENST00000523660 TRIM41Q8WV44 630 aa33.86■■■■□ 3.01
GEM-205ENST00000523660 PDS5BQ9NTI5 1447 aa33.8■■■■□ 3
GEM-205ENST00000523660 MROH2BQ7Z745 1585 aa33.72■■■□□ 2.99
GEM-205ENST00000523660 MRC2Q9UBG0 1479 aa33.58■■■□□ 2.97
GEM-205ENST00000523660 CADPSQ9ULU8 1353 aa33.58■■■□□ 2.97
GEM-205ENST00000523660 WDR62O43379 1518 aa33.53■■■□□ 2.96
GEM-205ENST00000523660 CEP164Q9UPV0 1460 aa33.31■■■□□ 2.92
GEM-205ENST00000523660 WIZO95785 1651 aa33.27■■■□□ 2.92
GEM-205ENST00000523660 FANCD2Q9BXW9 1451 aa33.21■■■□□ 2.91
GEM-205ENST00000523660 OSCARQ8IYS5 282 aa33.19■■■□□ 2.9
GEM-205ENST00000523660 CFTRP13569 1480 aa33.05■■■□□ 2.88
GEM-205ENST00000523660 URB2Q14146 1524 aaKnown RBP33.01■■■□□ 2.87
GEM-205ENST00000523660 RIMBP3CA6NJZ7 1639 aa32.89■■■□□ 2.86
GEM-205ENST00000523660 RIMBP3BA6NNM3 1639 aa32.89■■■□□ 2.86
GEM-205ENST00000523660 RIMBP3Q9UFD9 1639 aa32.89■■■□□ 2.86
GEM-205ENST00000523660 TOP2AP11388 1531 aaKnown RBP32.8■■■□□ 2.84
GEM-205ENST00000523660 RSF1Q96T23 1441 aaPredicted RBP32.75■■■□□ 2.83
GEM-205ENST00000523660 ARHGEF11O15085 1522 aa32.72■■■□□ 2.83
GEM-205ENST00000523660 ZNF608Q9ULD9 1512 aaPredicted RBP32.72■■■□□ 2.83
GEM-205ENST00000523660 PRDM2Q13029 1718 aa32.66■■■□□ 2.82
GEM-205ENST00000523660 IFT140Q96RY7 1462 aa32.66■■■□□ 2.82
GEM-205ENST00000523660 TOPBP1Q92547 1522 aa32.51■■■□□ 2.8
GEM-205ENST00000523660 EIF4G3O43432 1585 aaKnown RBP32.49■■■□□ 2.79
GEM-205ENST00000523660 CYB5RLQ6IPT4 315 aa32.49■■■□□ 2.79
GEM-205ENST00000523660 CCDC88BA6NC98 1476 aa32.43■■■□□ 2.78
GEM-205ENST00000523660 CHD1O14646 1710 aa32.37■■■□□ 2.77
GEM-205ENST00000523660 ARAP1Q96P48 1450 aa32.36■■■□□ 2.77
GEM-205ENST00000523660 ABCC8Q09428 1581 aa32.34■■■□□ 2.77
GEM-205ENST00000523660 TRHP20396 242 aaPredicted RBP32.34■■■□□ 2.77
GEM-205ENST00000523660 DNMBPQ6XZF7 1577 aa32.32■■■□□ 2.77
GEM-205ENST00000523660 AQRO60306 1485 aaKnown RBP eCLIP32.32■■■□□ 2.76
GEM-205ENST00000523660 TARBP1Q13395 1621 aaKnown RBP32.28■■■□□ 2.76
GEM-205ENST00000523660 FBLN2P98095 1184 aa32.21■■■□□ 2.75
GEM-205ENST00000523660 POLA1P09884 1462 aaPredicted RBP32.15■■■□□ 2.74
GEM-205ENST00000523660 RAD54L2Q9Y4B4 1467 aa32.05■■■□□ 2.72
GEM-205ENST00000523660 TDRD9Q8NDG6 1382 aaKnown RBP32■■■□□ 2.71
GEM-205ENST00000523660 CLASP1Q7Z460 1538 aa31.99■■■□□ 2.71
GEM-205ENST00000523660 SNAPC4Q5SXM2 1469 aa31.97■■■□□ 2.71
GEM-205ENST00000523660 SOGA1O94964 1423 aa31.95■■■□□ 2.71
GEM-205ENST00000523660 AEBP2Q6ZN18 517 aaPredicted RBP31.88■■■□□ 2.69
GEM-205ENST00000523660 SYNJ1O43426 1573 aa31.88■■■□□ 2.69
GEM-205ENST00000523660 WDR97A6NE52 1622 aa31.86■■■□□ 2.69
GEM-205ENST00000523660 CHMP7Q8WUX9 453 aaPredicted RBP31.85■■■□□ 2.69
GEM-205ENST00000523660 FGD5Q6ZNL6 1462 aa31.84■■■□□ 2.69
GEM-205ENST00000523660 MAGI1Q96QZ7 1491 aaPredicted RBP31.83■■■□□ 2.69
GEM-205ENST00000523660 GRIN2BQ13224 1484 aa31.76■■■□□ 2.67
GEM-205ENST00000523660 SYNJ2O15056 1496 aa31.74■■■□□ 2.67
GEM-205ENST00000523660 CUX1P39880 1505 aa31.72■■■□□ 2.67
GEM-205ENST00000523660 GAPVD1Q14C86 1478 aa31.68■■■□□ 2.66
GEM-205ENST00000523660 PBRM1Q86U86 1689 aa31.6■■■□□ 2.65
GEM-205ENST00000523660 ERCC6L2Q5T890 1561 aa31.47■■■□□ 2.63
GEM-205ENST00000523660 ABCA5Q8WWZ7 1642 aa31.46■■■□□ 2.63
GEM-205ENST00000523660 ABCA10Q8WWZ4 1543 aa31.43■■■□□ 2.62
GEM-205ENST00000523660 GRIN2AQ12879 1464 aa31.37■■■□□ 2.61
GEM-205ENST00000523660 CEP170Q5SW79 1584 aa31.33■■■□□ 2.61
GEM-205ENST00000523660 NUP160Q12769 1436 aa31.29■■■□□ 2.6
GEM-205ENST00000523660 ADAMTS12P58397 1594 aa31.28■■■□□ 2.6
GEM-205ENST00000523660 SHROOM2Q13796 1616 aa31.23■■■□□ 2.59
GEM-205ENST00000523660 KIF13AQ9H1H9 1805 aa31.19■■■□□ 2.58
GEM-205ENST00000523660 SUPT5HO00267 1087 aaKnown RBP31.17■■■□□ 2.58
GEM-205ENST00000523660 WRNQ14191 1432 aaPredicted RBP eCLIP31.15■■■□□ 2.58
GEM-205ENST00000523660 FHAD1B1AJZ9 1412 aa31.13■■■□□ 2.57
GEM-205ENST00000523660 PRG4Q92954 1404 aaPredicted RBP31.04■■■□□ 2.56
GEM-205ENST00000523660 ERICH3Q5RHP9 1530 aa31.01■■■□□ 2.55
GEM-205ENST00000523660 BIVM-ERCC5R4GMW8 1640 aa31.01■■■□□ 2.55
GEM-205ENST00000523660 TOP2BQ02880 1626 aa31■■■□□ 2.55
GEM-205ENST00000523660 ABCC10Q5T3U5 1492 aa30.95■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms