RNA–Protein interactions for RNA: ENST00000523639.5

CCNC-214, Transcript of cyclin C, humanhuman

TSL 2

Gene CCNC, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-214ENST00000523639 NISCHQ9Y2I1 1504 aa42.25■■■■■ 4.35
CCNC-214ENST00000523639 CCDC180Q9P1Z9 1646 aa37.65■■■■□ 3.62
CCNC-214ENST00000523639 ABCC9O60706 1549 aa37.09■■■■□ 3.53
CCNC-214ENST00000523639 RB1CC1Q8TDY2 1594 aa35.63■■■■□ 3.29
CCNC-214ENST00000523639 NACADO15069 1562 aa35.55■■■■□ 3.28
CCNC-214ENST00000523639 DCAF8L2P0C7V8 631 aa35.43■■■■□ 3.26
CCNC-214ENST00000523639 MYO15BQ96JP2 1530 aa35.33■■■■□ 3.25
CCNC-214ENST00000523639 ZCCHC6Q5VYS8 1495 aaKnown RBP35.09■■■■□ 3.21
CCNC-214ENST00000523639 DCAF1Q9Y4B6 1507 aa35.03■■■■□ 3.2
CCNC-214ENST00000523639 PABPN1Q86U42 306 aaKnown RBP eCLIP34.65■■■■□ 3.14
CCNC-214ENST00000523639 UNC13AQ9UPW8 1703 aa34.61■■■■□ 3.13
CCNC-214ENST00000523639 BICRAQ9NZM4 1560 aa34.48■■■■□ 3.11
CCNC-214ENST00000523639 DNAJC5BQ9UF47 199 aa34.37■■■■□ 3.09
CCNC-214ENST00000523639 SHROOM4Q9ULL8 1493 aa34.28■■■■□ 3.08
CCNC-214ENST00000523639 SCRIBQ14160 1630 aa34.22■■■■□ 3.07
CCNC-214ENST00000523639 EIF4G1Q04637 1599 aaKnown RBP33.63■■■□□ 2.97
CCNC-214ENST00000523639 CC2D2AQ9P2K1 1620 aa33.53■■■□□ 2.96
CCNC-214ENST00000523639 CECR2Q9BXF3 1484 aa33.43■■■□□ 2.94
CCNC-214ENST00000523639 NCAPD3P42695 1498 aa32.86■■■□□ 2.85
CCNC-214ENST00000523639 BAZ1AQ9NRL2 1556 aaPredicted RBP32.78■■■□□ 2.84
CCNC-214ENST00000523639 SMARCA4P51532 1647 aa32.77■■■□□ 2.84
CCNC-214ENST00000523639 ATAD2BQ9ULI0 1458 aa32.75■■■□□ 2.83
CCNC-214ENST00000523639 SMARCA2P51531 1590 aa32.72■■■□□ 2.83
CCNC-214ENST00000523639 HMGXB3Q12766 1538 aa32.59■■■□□ 2.81
CCNC-214ENST00000523639 PEG3Q9GZU2 1588 aa32.55■■■□□ 2.8
CCNC-214ENST00000523639 MROH2BQ7Z745 1585 aa32.48■■■□□ 2.79
CCNC-214ENST00000523639 BAZ1BQ9UIG0 1483 aaKnown RBP32.45■■■□□ 2.79
CCNC-214ENST00000523639 RSF1Q96T23 1441 aaPredicted RBP32.08■■■□□ 2.73
CCNC-214ENST00000523639 WIZO95785 1651 aa32.05■■■□□ 2.72
CCNC-214ENST00000523639 ERCC6Q03468 1493 aa32.04■■■□□ 2.72
CCNC-214ENST00000523639 NESP48681 1621 aa31.97■■■□□ 2.71
CCNC-214ENST00000523639 LAMC3Q9Y6N6 1575 aa31.97■■■□□ 2.71
CCNC-214ENST00000523639 CUX2O14529 1486 aa31.89■■■□□ 2.7
CCNC-214ENST00000523639 CADPSQ9ULU8 1353 aa31.88■■■□□ 2.69
CCNC-214ENST00000523639 PDS5BQ9NTI5 1447 aa31.84■■■□□ 2.69
CCNC-214ENST00000523639 TOP2AP11388 1531 aaKnown RBP31.79■■■□□ 2.68
CCNC-214ENST00000523639 CFTRP13569 1480 aa31.59■■■□□ 2.65
CCNC-214ENST00000523639 THOC2Q8NI27 1593 aaKnown RBP31.55■■■□□ 2.64
CCNC-214ENST00000523639 KIF21AQ7Z4S6 1674 aa31.52■■■□□ 2.64
CCNC-214ENST00000523639 CCDC88BA6NC98 1476 aa31.45■■■□□ 2.62
CCNC-214ENST00000523639 MRC2Q9UBG0 1479 aa31.44■■■□□ 2.62
CCNC-214ENST00000523639 FANCD2Q9BXW9 1451 aa31.43■■■□□ 2.62
CCNC-214ENST00000523639 CEP164Q9UPV0 1460 aa31.42■■■□□ 2.62
CCNC-214ENST00000523639 DNAJC5Q9H3Z4 198 aa31.32■■■□□ 2.6
CCNC-214ENST00000523639 WDR62O43379 1518 aa31.32■■■□□ 2.6
CCNC-214ENST00000523639 PRDM2Q13029 1718 aa31.15■■■□□ 2.58
CCNC-214ENST00000523639 URB2Q14146 1524 aaKnown RBP31.08■■■□□ 2.57
CCNC-214ENST00000523639 ABCC8Q09428 1581 aa31■■■□□ 2.55
CCNC-214ENST00000523639 SUPT5HO00267 1087 aaKnown RBP31■■■□□ 2.55
CCNC-214ENST00000523639 TOPBP1Q92547 1522 aa30.87■■■□□ 2.53
CCNC-214ENST00000523639 IFT140Q96RY7 1462 aa30.82■■■□□ 2.53
CCNC-214ENST00000523639 DNMBPQ6XZF7 1577 aa30.81■■■□□ 2.52
CCNC-214ENST00000523639 ZNF608Q9ULD9 1512 aaPredicted RBP30.59■■■□□ 2.49
CCNC-214ENST00000523639 POLA1P09884 1462 aaPredicted RBP30.59■■■□□ 2.49
CCNC-214ENST00000523639 OSCARQ8IYS5 282 aa30.59■■■□□ 2.49
CCNC-214ENST00000523639 SOGA1O94964 1423 aa30.54■■■□□ 2.48
CCNC-214ENST00000523639 TARBP1Q13395 1621 aaKnown RBP30.53■■■□□ 2.48
CCNC-214ENST00000523639 CUX1P39880 1505 aa30.49■■■□□ 2.47
CCNC-214ENST00000523639 FGD5Q6ZNL6 1462 aa30.45■■■□□ 2.47
CCNC-214ENST00000523639 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.46
CCNC-214ENST00000523639 RAD54L2Q9Y4B4 1467 aa30.43■■■□□ 2.46
CCNC-214ENST00000523639 EIF4G3O43432 1585 aaKnown RBP30.42■■■□□ 2.46
CCNC-214ENST00000523639 WDR97A6NE52 1622 aa30.39■■■□□ 2.46
CCNC-214ENST00000523639 TDRD9Q8NDG6 1382 aaKnown RBP30.35■■■□□ 2.45
CCNC-214ENST00000523639 WRNQ14191 1432 aaPredicted RBP eCLIP30.26■■■□□ 2.43
CCNC-214ENST00000523639 ABCA10Q8WWZ4 1543 aa30.22■■■□□ 2.43
CCNC-214ENST00000523639 GRIN2BQ13224 1484 aa30.2■■■□□ 2.43
CCNC-214ENST00000523639 TOP2BQ02880 1626 aa30.18■■■□□ 2.42
CCNC-214ENST00000523639 FBLN2P98095 1184 aa30.17■■■□□ 2.42
CCNC-214ENST00000523639 MAGI1Q96QZ7 1491 aaPredicted RBP30.16■■■□□ 2.42
CCNC-214ENST00000523639 BIVM-ERCC5R4GMW8 1640 aa30.14■■■□□ 2.42
CCNC-214ENST00000523639 GAPVD1Q14C86 1478 aa30.14■■■□□ 2.42
CCNC-214ENST00000523639 CHMP7Q8WUX9 453 aaPredicted RBP30.11■■■□□ 2.41
CCNC-214ENST00000523639 SNAPC4Q5SXM2 1469 aa30.11■■■□□ 2.41
CCNC-214ENST00000523639 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
CCNC-214ENST00000523639 CHD1O14646 1710 aa30.04■■■□□ 2.4
CCNC-214ENST00000523639 SYNJ2O15056 1496 aa30.03■■■□□ 2.4
CCNC-214ENST00000523639 TRIM41Q8WV44 630 aa30.02■■■□□ 2.4
CCNC-214ENST00000523639 ABCA5Q8WWZ7 1642 aa30.02■■■□□ 2.4
CCNC-214ENST00000523639 PBRM1Q86U86 1689 aa29.94■■■□□ 2.38
CCNC-214ENST00000523639 ARHGEF11O15085 1522 aa29.93■■■□□ 2.38
CCNC-214ENST00000523639 AEBP2Q6ZN18 517 aaPredicted RBP29.92■■■□□ 2.38
CCNC-214ENST00000523639 RIMBP3CA6NJZ7 1639 aa29.91■■■□□ 2.38
CCNC-214ENST00000523639 RIMBP3BA6NNM3 1639 aa29.91■■■□□ 2.38
CCNC-214ENST00000523639 RIMBP3Q9UFD9 1639 aa29.91■■■□□ 2.38
CCNC-214ENST00000523639 ERICH3Q5RHP9 1530 aa29.86■■■□□ 2.37
CCNC-214ENST00000523639 CLASP1Q7Z460 1538 aa29.83■■■□□ 2.37
CCNC-214ENST00000523639 FHAD1B1AJZ9 1412 aa29.82■■■□□ 2.36
CCNC-214ENST00000523639 GRIN2AQ12879 1464 aa29.77■■■□□ 2.36
CCNC-214ENST00000523639 CYB5RLQ6IPT4 315 aa29.75■■■□□ 2.35
CCNC-214ENST00000523639 ADAMTS12P58397 1594 aa29.74■■■□□ 2.35
CCNC-214ENST00000523639 KIF27Q86VH2 1401 aa29.7■■■□□ 2.34
CCNC-214ENST00000523639 NUP160Q12769 1436 aa29.69■■■□□ 2.34
CCNC-214ENST00000523639 ARAP1Q96P48 1450 aa29.65■■■□□ 2.34
CCNC-214ENST00000523639 IGF1RP08069 1367 aa29.63■■■□□ 2.33
CCNC-214ENST00000523639 CEP170Q5SW79 1584 aa29.56■■■□□ 2.32
CCNC-214ENST00000523639 CUL7Q14999 1698 aa29.47■■■□□ 2.31
CCNC-214ENST00000523639 JPH4Q96JJ6 628 aa29.46■■■□□ 2.31
CCNC-214ENST00000523639 CARMIL1Q5VZK9 1371 aa29.43■■■□□ 2.3
CCNC-214ENST00000523639 SHROOM2Q13796 1616 aa29.42■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 168.4 ms