RNA–Protein interactions for RNA: ENST00000523539.5

PTK2-246, Transcript of protein tyrosine kinase 2, humanhuman

TSL 2

Gene PTK2, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-246ENST00000523539 NISCHQ9Y2I1 1504 aa15.89■□□□□ 0.13
PTK2-246ENST00000523539 CCDC180Q9P1Z9 1646 aa13.76□□□□□ -0.21
PTK2-246ENST00000523539 ZCCHC6Q5VYS8 1495 aaKnown RBP13.36□□□□□ -0.27
PTK2-246ENST00000523539 DCAF8L2P0C7V8 631 aa13.1□□□□□ -0.31
PTK2-246ENST00000523539 SHROOM4Q9ULL8 1493 aa13.09□□□□□ -0.31
PTK2-246ENST00000523539 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.32
PTK2-246ENST00000523539 ABCC9O60706 1549 aa13□□□□□ -0.33
PTK2-246ENST00000523539 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
PTK2-246ENST00000523539 NACADO15069 1562 aa12.79□□□□□ -0.36
PTK2-246ENST00000523539 SCRIBQ14160 1630 aa12.74□□□□□ -0.37
PTK2-246ENST00000523539 RB1CC1Q8TDY2 1594 aa12.66□□□□□ -0.38
PTK2-246ENST00000523539 SUPT5HO00267 1087 aaKnown RBP12.6□□□□□ -0.39
PTK2-246ENST00000523539 UNC13AQ9UPW8 1703 aa12.53□□□□□ -0.4
PTK2-246ENST00000523539 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.42
PTK2-246ENST00000523539 RSF1Q96T23 1441 aaPredicted RBP12.38□□□□□ -0.43
PTK2-246ENST00000523539 BICRAQ9NZM4 1560 aa12.37□□□□□ -0.43
PTK2-246ENST00000523539 MROH2BQ7Z745 1585 aa12.32□□□□□ -0.44
PTK2-246ENST00000523539 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTK2-246ENST00000523539 WIZO95785 1651 aa12.24□□□□□ -0.45
PTK2-246ENST00000523539 BAZ1AQ9NRL2 1556 aaPredicted RBP12.22□□□□□ -0.45
PTK2-246ENST00000523539 SMARCA4P51532 1647 aa12.19□□□□□ -0.46
PTK2-246ENST00000523539 CHIC1Q5VXU3 224 aa12.11□□□□□ -0.47
PTK2-246ENST00000523539 TOP2AP11388 1531 aaKnown RBP12.03□□□□□ -0.48
PTK2-246ENST00000523539 PEG3Q9GZU2 1588 aa12.03□□□□□ -0.48
PTK2-246ENST00000523539 ATAD2BQ9ULI0 1458 aa11.97□□□□□ -0.49
PTK2-246ENST00000523539 SMARCA2P51531 1590 aa11.97□□□□□ -0.49
PTK2-246ENST00000523539 CCDC88BA6NC98 1476 aa11.96□□□□□ -0.49
PTK2-246ENST00000523539 EIF4G1Q04637 1599 aaKnown RBP11.95□□□□□ -0.5
PTK2-246ENST00000523539 BAZ1BQ9UIG0 1483 aaKnown RBP11.88□□□□□ -0.51
PTK2-246ENST00000523539 NCAPD3P42695 1498 aa11.83□□□□□ -0.52
PTK2-246ENST00000523539 HMGXB3Q12766 1538 aa11.8□□□□□ -0.52
PTK2-246ENST00000523539 TRIM41Q8WV44 630 aa11.79□□□□□ -0.52
PTK2-246ENST00000523539 ABCC8Q09428 1581 aa11.77□□□□□ -0.52
PTK2-246ENST00000523539 CC2D2AQ9P2K1 1620 aa11.77□□□□□ -0.52
PTK2-246ENST00000523539 LOC105371045A0A1W2PR82 267 aa11.71□□□□□ -0.54
PTK2-246ENST00000523539 FAM9AQ8IZU1 332 aaPredicted RBP11.64□□□□□ -0.55
PTK2-246ENST00000523539 SYNJ1O43426 1573 aa11.62□□□□□ -0.55
PTK2-246ENST00000523539 WRNQ14191 1432 aaPredicted RBP eCLIP11.61□□□□□ -0.55
PTK2-246ENST00000523539 CFTRP13569 1480 aa11.61□□□□□ -0.55
PTK2-246ENST00000523539 DNAJC5BQ9UF47 199 aa11.57□□□□□ -0.56
PTK2-246ENST00000523539 SOGA1O94964 1423 aa11.56□□□□□ -0.56
PTK2-246ENST00000523539 RUSC2Q8N2Y8 1516 aa11.55□□□□□ -0.56
PTK2-246ENST00000523539 PRDM2Q13029 1718 aa11.54□□□□□ -0.56
PTK2-246ENST00000523539 CADPSQ9ULU8 1353 aa11.53□□□□□ -0.56
PTK2-246ENST00000523539 TOP2BQ02880 1626 aa11.52□□□□□ -0.57
PTK2-246ENST00000523539 EHMT2Q96KQ7 1210 aa11.52□□□□□ -0.57
PTK2-246ENST00000523539 BIVM-ERCC5R4GMW8 1640 aa11.51□□□□□ -0.57
PTK2-246ENST00000523539 CUX1P39880 1505 aa11.5□□□□□ -0.57
PTK2-246ENST00000523539 NESP48681 1621 aa11.48□□□□□ -0.57
PTK2-246ENST00000523539 FANCD2Q9BXW9 1451 aa11.42□□□□□ -0.58
PTK2-246ENST00000523539 EEA1Q15075 1411 aa11.42□□□□□ -0.58
PTK2-246ENST00000523539 CSRNP3Q8WYN3 585 aa11.41□□□□□ -0.58
PTK2-246ENST00000523539 LAMC3Q9Y6N6 1575 aa11.4□□□□□ -0.59
PTK2-246ENST00000523539 FGD5Q6ZNL6 1462 aa11.34□□□□□ -0.59
PTK2-246ENST00000523539 KIF21BO75037 1637 aa11.33□□□□□ -0.6
PTK2-246ENST00000523539 KIF21AQ7Z4S6 1674 aa11.33□□□□□ -0.6
PTK2-246ENST00000523539 DNMBPQ6XZF7 1577 aa11.31□□□□□ -0.6
PTK2-246ENST00000523539 CEP164Q9UPV0 1460 aa11.31□□□□□ -0.6
PTK2-246ENST00000523539 TOPBP1Q92547 1522 aa11.31□□□□□ -0.6
PTK2-246ENST00000523539 GOLGA3Q08378 1498 aa11.31□□□□□ -0.6
PTK2-246ENST00000523539 RAPGEF2Q9Y4G8 1499 aa11.31□□□□□ -0.6
PTK2-246ENST00000523539 URB2Q14146 1524 aaKnown RBP11.31□□□□□ -0.6
PTK2-246ENST00000523539 TNIKQ9UKE5 1360 aa11.3□□□□□ -0.6
PTK2-246ENST00000523539 PDS5BQ9NTI5 1447 aa11.28□□□□□ -0.6
PTK2-246ENST00000523539 CEP162Q5TB80 1403 aa11.28□□□□□ -0.6
PTK2-246ENST00000523539 POLA1P09884 1462 aaPredicted RBP11.28□□□□□ -0.6
PTK2-246ENST00000523539 KIF27Q86VH2 1401 aa11.28□□□□□ -0.6
PTK2-246ENST00000523539 PRXQ9BXM0 1461 aa11.27□□□□□ -0.6
PTK2-246ENST00000523539 UBTFP17480 764 aaKnown RBP11.27□□□□□ -0.61
PTK2-246ENST00000523539 RAD54L2Q9Y4B4 1467 aa11.27□□□□□ -0.61
PTK2-246ENST00000523539 CUX2O14529 1486 aa11.26□□□□□ -0.61
PTK2-246ENST00000523539 IGF1RP08069 1367 aa11.23□□□□□ -0.61
PTK2-246ENST00000523539 ERICH3Q5RHP9 1530 aa11.23□□□□□ -0.61
PTK2-246ENST00000523539 ABCA10Q8WWZ4 1543 aa11.22□□□□□ -0.61
PTK2-246ENST00000523539 PCGF6Q9BYE7 350 aa11.22□□□□□ -0.61
PTK2-246ENST00000523539 WDR97A6NE52 1622 aa11.21□□□□□ -0.61
PTK2-246ENST00000523539 TARBP1Q13395 1621 aaKnown RBP11.16□□□□□ -0.62
PTK2-246ENST00000523539 PPARGC1BQ86YN6 1023 aaKnown RBP11.16□□□□□ -0.62
PTK2-246ENST00000523539 MRC2Q9UBG0 1479 aa11.15□□□□□ -0.62
PTK2-246ENST00000523539 CLIP1P30622 1438 aa11.15□□□□□ -0.63
PTK2-246ENST00000523539 ABCA5Q8WWZ7 1642 aa11.15□□□□□ -0.63
PTK2-246ENST00000523539 CARMIL1Q5VZK9 1371 aa11.14□□□□□ -0.63
PTK2-246ENST00000523539 TDRD9Q8NDG6 1382 aaKnown RBP11.13□□□□□ -0.63
PTK2-246ENST00000523539 TRIM26Q12899 539 aaPredicted RBP11.13□□□□□ -0.63
PTK2-246ENST00000523539 RANGAP1P46060 587 aaPredicted RBP11.13□□□□□ -0.63
PTK2-246ENST00000523539 WDR62O43379 1518 aa11.12□□□□□ -0.63
PTK2-246ENST00000523539 THOC2Q8NI27 1593 aaKnown RBP11.1□□□□□ -0.63
PTK2-246ENST00000523539 GAPVD1Q14C86 1478 aa11.09□□□□□ -0.63
PTK2-246ENST00000523539 CUL7Q14999 1698 aa11.08□□□□□ -0.64
PTK2-246ENST00000523539 ARAP1Q96P48 1450 aa11.08□□□□□ -0.64
PTK2-246ENST00000523539 ERCC6Q03468 1493 aa11.08□□□□□ -0.64
PTK2-246ENST00000523539 VPS8Q8N3P4 1428 aa11.06□□□□□ -0.64
PTK2-246ENST00000523539 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.641e-6■■■□□ 15.6
PTK2-246ENST00000523539 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
PTK2-246ENST00000523539 ZNF608Q9ULD9 1512 aaPredicted RBP11.05□□□□□ -0.64
PTK2-246ENST00000523539 PBRM1Q86U86 1689 aa11.05□□□□□ -0.64
PTK2-246ENST00000523539 TTBK1Q5TCY1 1321 aaPredicted RBP11.02□□□□□ -0.64
PTK2-246ENST00000523539 IFT140Q96RY7 1462 aa11.02□□□□□ -0.65
PTK2-246ENST00000523539 CTTNBP2Q8WZ74 1663 aa11.01□□□□□ -0.65
PTK2-246ENST00000523539 EIF4G3O43432 1585 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms