RNA–Protein interactions for RNA: ENST00000523467.1

NEFM-206, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 582 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-206ENST00000523467 NISCHQ9Y2I1 1504 aa37.36■■■■□ 3.57
NEFM-206ENST00000523467 CCDC180Q9P1Z9 1646 aa33.38■■■□□ 2.93
NEFM-206ENST00000523467 ABCC9O60706 1549 aa32.92■■■□□ 2.86
NEFM-206ENST00000523467 RB1CC1Q8TDY2 1594 aa31.53■■■□□ 2.64
NEFM-206ENST00000523467 NACADO15069 1562 aa31.4■■■□□ 2.62
NEFM-206ENST00000523467 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
NEFM-206ENST00000523467 MYO15BQ96JP2 1530 aa31.08■■■□□ 2.57
NEFM-206ENST00000523467 ZCCHC6Q5VYS8 1495 aaKnown RBP31.07■■■□□ 2.56
NEFM-206ENST00000523467 UNC13AQ9UPW8 1703 aa30.88■■■□□ 2.53
NEFM-206ENST00000523467 DCAF1Q9Y4B6 1507 aa30.86■■■□□ 2.53
NEFM-206ENST00000523467 PABPN1Q86U42 306 aaKnown RBP eCLIP30.69■■■□□ 2.5
NEFM-206ENST00000523467 BICRAQ9NZM4 1560 aa30.58■■■□□ 2.49
NEFM-206ENST00000523467 SCRIBQ14160 1630 aa30.47■■■□□ 2.47
NEFM-206ENST00000523467 DNAJC5BQ9UF47 199 aa30.4■■■□□ 2.46
NEFM-206ENST00000523467 SHROOM4Q9ULL8 1493 aa30.19■■■□□ 2.42
NEFM-206ENST00000523467 EIF4G1Q04637 1599 aaKnown RBP29.81■■■□□ 2.36
NEFM-206ENST00000523467 CC2D2AQ9P2K1 1620 aa29.77■■■□□ 2.36
NEFM-206ENST00000523467 CECR2Q9BXF3 1484 aa29.59■■■□□ 2.33
NEFM-206ENST00000523467 SMARCA4P51532 1647 aa29.08■■■□□ 2.25
NEFM-206ENST00000523467 BAZ1AQ9NRL2 1556 aaPredicted RBP28.98■■■□□ 2.23
NEFM-206ENST00000523467 ATAD2BQ9ULI0 1458 aa28.95■■■□□ 2.22
NEFM-206ENST00000523467 NCAPD3P42695 1498 aa28.94■■■□□ 2.22
NEFM-206ENST00000523467 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
NEFM-206ENST00000523467 HMGXB3Q12766 1538 aa28.83■■■□□ 2.21
NEFM-206ENST00000523467 MROH2BQ7Z745 1585 aa28.8■■■□□ 2.2
NEFM-206ENST00000523467 PEG3Q9GZU2 1588 aa28.75■■■□□ 2.19
NEFM-206ENST00000523467 BAZ1BQ9UIG0 1483 aaKnown RBP28.73■■■□□ 2.19
NEFM-206ENST00000523467 WIZO95785 1651 aa28.51■■■□□ 2.16
NEFM-206ENST00000523467 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
NEFM-206ENST00000523467 NESP48681 1621 aa28.4■■■□□ 2.14
NEFM-206ENST00000523467 RSF1Q96T23 1441 aaPredicted RBP28.35■■■□□ 2.13
NEFM-206ENST00000523467 LAMC3Q9Y6N6 1575 aa28.28■■■□□ 2.12
NEFM-206ENST00000523467 TOP2AP11388 1531 aaKnown RBP28.17■■■□□ 2.1
NEFM-206ENST00000523467 CUX2O14529 1486 aa28.16■■■□□ 2.1
NEFM-206ENST00000523467 KIF21AQ7Z4S6 1674 aa28.11■■■□□ 2.09
NEFM-206ENST00000523467 CADPSQ9ULU8 1353 aa28.1■■■□□ 2.09
NEFM-206ENST00000523467 PDS5BQ9NTI5 1447 aa28.07■■■□□ 2.08
NEFM-206ENST00000523467 THOC2Q8NI27 1593 aaKnown RBP28.05■■■□□ 2.08
NEFM-206ENST00000523467 CFTRP13569 1480 aa27.88■■■□□ 2.05
NEFM-206ENST00000523467 MRC2Q9UBG0 1479 aa27.83■■■□□ 2.05
NEFM-206ENST00000523467 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.04
NEFM-206ENST00000523467 FANCD2Q9BXW9 1451 aa27.82■■■□□ 2.04
NEFM-206ENST00000523467 CCDC88BA6NC98 1476 aa27.81■■■□□ 2.04
NEFM-206ENST00000523467 PRDM2Q13029 1718 aa27.75■■■□□ 2.03
NEFM-206ENST00000523467 WDR62O43379 1518 aa27.75■■■□□ 2.03
NEFM-206ENST00000523467 DNAJC5Q9H3Z4 198 aa27.58■■■□□ 2.01
NEFM-206ENST00000523467 URB2Q14146 1524 aaKnown RBP27.57■■■□□ 2
NEFM-206ENST00000523467 SUPT5HO00267 1087 aaKnown RBP27.45■■□□□ 1.98
NEFM-206ENST00000523467 TOPBP1Q92547 1522 aa27.35■■□□□ 1.97
NEFM-206ENST00000523467 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
NEFM-206ENST00000523467 ABCC8Q09428 1581 aa27.29■■□□□ 1.96
NEFM-206ENST00000523467 IFT140Q96RY7 1462 aa27.23■■□□□ 1.95
NEFM-206ENST00000523467 ZNF608Q9ULD9 1512 aaPredicted RBP27.16■■□□□ 1.94
NEFM-206ENST00000523467 POLA1P09884 1462 aaPredicted RBP27.09■■□□□ 1.93
NEFM-206ENST00000523467 EIF4G3O43432 1585 aaKnown RBP27.07■■□□□ 1.92
NEFM-206ENST00000523467 TARBP1Q13395 1621 aaKnown RBP27.07■■□□□ 1.92
NEFM-206ENST00000523467 CUX1P39880 1505 aa27.05■■□□□ 1.92
NEFM-206ENST00000523467 FGD5Q6ZNL6 1462 aa27■■□□□ 1.91
NEFM-206ENST00000523467 RAD54L2Q9Y4B4 1467 aa26.99■■□□□ 1.91
NEFM-206ENST00000523467 SOGA1O94964 1423 aa26.95■■□□□ 1.9
NEFM-206ENST00000523467 AQRO60306 1485 aaKnown RBP eCLIP26.94■■□□□ 1.9
NEFM-206ENST00000523467 OSCARQ8IYS5 282 aa26.91■■□□□ 1.9
NEFM-206ENST00000523467 TDRD9Q8NDG6 1382 aaKnown RBP26.85■■□□□ 1.89
NEFM-206ENST00000523467 WDR97A6NE52 1622 aa26.83■■□□□ 1.88
NEFM-206ENST00000523467 CHD1O14646 1710 aa26.81■■□□□ 1.88
NEFM-206ENST00000523467 BIVM-ERCC5R4GMW8 1640 aa26.76■■□□□ 1.87
NEFM-206ENST00000523467 WRNQ14191 1432 aaPredicted RBP eCLIP26.75■■□□□ 1.87
NEFM-206ENST00000523467 SYNJ1O43426 1573 aa26.74■■□□□ 1.87
NEFM-206ENST00000523467 TOP2BQ02880 1626 aa26.73■■□□□ 1.87
NEFM-206ENST00000523467 SNAPC4Q5SXM2 1469 aa26.72■■□□□ 1.87
NEFM-206ENST00000523467 ABCA10Q8WWZ4 1543 aa26.7■■□□□ 1.86
NEFM-206ENST00000523467 FBLN2P98095 1184 aa26.69■■□□□ 1.86
NEFM-206ENST00000523467 PBRM1Q86U86 1689 aa26.69■■□□□ 1.86
NEFM-206ENST00000523467 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
NEFM-206ENST00000523467 ABCA5Q8WWZ7 1642 aa26.65■■□□□ 1.86
NEFM-206ENST00000523467 GAPVD1Q14C86 1478 aa26.65■■□□□ 1.86
NEFM-206ENST00000523467 MAGI1Q96QZ7 1491 aaPredicted RBP26.65■■□□□ 1.86
NEFM-206ENST00000523467 TRIM41Q8WV44 630 aa26.63■■□□□ 1.85
NEFM-206ENST00000523467 RIMBP3CA6NJZ7 1639 aa26.6■■□□□ 1.85
NEFM-206ENST00000523467 RIMBP3BA6NNM3 1639 aa26.6■■□□□ 1.85
NEFM-206ENST00000523467 RIMBP3Q9UFD9 1639 aa26.6■■□□□ 1.85
NEFM-206ENST00000523467 CHMP7Q8WUX9 453 aaPredicted RBP26.55■■□□□ 1.84
NEFM-206ENST00000523467 SYNJ2O15056 1496 aa26.55■■□□□ 1.84
NEFM-206ENST00000523467 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
NEFM-206ENST00000523467 CLASP1Q7Z460 1538 aa26.44■■□□□ 1.82
NEFM-206ENST00000523467 ADAMTS12P58397 1594 aa26.43■■□□□ 1.82
NEFM-206ENST00000523467 ERICH3Q5RHP9 1530 aa26.38■■□□□ 1.81
NEFM-206ENST00000523467 GRIN2AQ12879 1464 aa26.35■■□□□ 1.81
NEFM-206ENST00000523467 FHAD1B1AJZ9 1412 aa26.32■■□□□ 1.8
NEFM-206ENST00000523467 ARAP1Q96P48 1450 aa26.31■■□□□ 1.8
NEFM-206ENST00000523467 CYB5RLQ6IPT4 315 aa26.28■■□□□ 1.8
NEFM-206ENST00000523467 CEP170Q5SW79 1584 aa26.26■■□□□ 1.79
NEFM-206ENST00000523467 NUP160Q12769 1436 aa26.22■■□□□ 1.79
NEFM-206ENST00000523467 KIF27Q86VH2 1401 aa26.21■■□□□ 1.79
NEFM-206ENST00000523467 CUL7Q14999 1698 aa26.12■■□□□ 1.77
NEFM-206ENST00000523467 IGF1RP08069 1367 aa26.09■■□□□ 1.77
NEFM-206ENST00000523467 SHROOM2Q13796 1616 aa26.09■■□□□ 1.77
NEFM-206ENST00000523467 ERCC6L2Q5T890 1561 aa26.08■■□□□ 1.77
NEFM-206ENST00000523467 RUSC2Q8N2Y8 1516 aa26.05■■□□□ 1.76
NEFM-206ENST00000523467 CARMIL1Q5VZK9 1371 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms