RNA–Protein interactions for RNA: ENST00000523410.1

C1orf198-207, Transcript of chromosome 1 open reading frame 198, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C1orf198, Length 1,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf198-207ENST00000523410 NISCHQ9Y2I1 1504 aa32.16■■■□□ 2.74
C1orf198-207ENST00000523410 ABCC9O60706 1549 aa28.95■■■□□ 2.23
C1orf198-207ENST00000523410 CCDC180Q9P1Z9 1646 aa28.94■■■□□ 2.22
C1orf198-207ENST00000523410 RB1CC1Q8TDY2 1594 aa27.52■■■□□ 2
C1orf198-207ENST00000523410 NACADO15069 1562 aa27.32■■□□□ 1.96
C1orf198-207ENST00000523410 DNAJC5BQ9UF47 199 aa27.25■■□□□ 1.95
C1orf198-207ENST00000523410 UNC13AQ9UPW8 1703 aa27.02■■□□□ 1.92
C1orf198-207ENST00000523410 DCAF8L2P0C7V8 631 aa26.95■■□□□ 1.9
C1orf198-207ENST00000523410 MYO15BQ96JP2 1530 aa26.95■■□□□ 1.9
C1orf198-207ENST00000523410 PABPN1Q86U42 306 aaKnown RBP eCLIP26.88■■□□□ 1.89
C1orf198-207ENST00000523410 BICRAQ9NZM4 1560 aa26.83■■□□□ 1.89
C1orf198-207ENST00000523410 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
C1orf198-207ENST00000523410 DCAF1Q9Y4B6 1507 aa26.57■■□□□ 1.84
C1orf198-207ENST00000523410 SHROOM4Q9ULL8 1493 aa26.38■■□□□ 1.81
C1orf198-207ENST00000523410 SCRIBQ14160 1630 aa26.35■■□□□ 1.81
C1orf198-207ENST00000523410 CC2D2AQ9P2K1 1620 aa26.19■■□□□ 1.78
C1orf198-207ENST00000523410 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
C1orf198-207ENST00000523410 CECR2Q9BXF3 1484 aa26.08■■□□□ 1.77
C1orf198-207ENST00000523410 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
C1orf198-207ENST00000523410 ATAD2BQ9ULI0 1458 aa25.15■■□□□ 1.62
C1orf198-207ENST00000523410 SMARCA4P51532 1647 aa25.13■■□□□ 1.61
C1orf198-207ENST00000523410 HMGXB3Q12766 1538 aa25.07■■□□□ 1.6
C1orf198-207ENST00000523410 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
C1orf198-207ENST00000523410 DNAJC5Q9H3Z4 198 aa25.01■■□□□ 1.59
C1orf198-207ENST00000523410 CUX2O14529 1486 aa24.99■■□□□ 1.59
C1orf198-207ENST00000523410 ERCC6Q03468 1493 aa24.95■■□□□ 1.58
C1orf198-207ENST00000523410 BAZ1AQ9NRL2 1556 aaPredicted RBP24.94■■□□□ 1.58
C1orf198-207ENST00000523410 PEG3Q9GZU2 1588 aa24.91■■□□□ 1.58
C1orf198-207ENST00000523410 NESP48681 1621 aa24.89■■□□□ 1.57
C1orf198-207ENST00000523410 BAZ1BQ9UIG0 1483 aaKnown RBP24.86■■□□□ 1.57
C1orf198-207ENST00000523410 MROH2BQ7Z745 1585 aa24.8■■□□□ 1.56
C1orf198-207ENST00000523410 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
C1orf198-207ENST00000523410 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
C1orf198-207ENST00000523410 KIF21AQ7Z4S6 1674 aa24.6■■□□□ 1.53
C1orf198-207ENST00000523410 WIZO95785 1651 aa24.5■■□□□ 1.51
C1orf198-207ENST00000523410 PDS5BQ9NTI5 1447 aa24.45■■□□□ 1.51
C1orf198-207ENST00000523410 CADPSQ9ULU8 1353 aa24.41■■□□□ 1.5
C1orf198-207ENST00000523410 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
C1orf198-207ENST00000523410 WDR62O43379 1518 aa24.32■■□□□ 1.48
C1orf198-207ENST00000523410 RSF1Q96T23 1441 aaPredicted RBP24.22■■□□□ 1.47
C1orf198-207ENST00000523410 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
C1orf198-207ENST00000523410 TOP2AP11388 1531 aaKnown RBP24.18■■□□□ 1.46
C1orf198-207ENST00000523410 CFTRP13569 1480 aa24.17■■□□□ 1.46
C1orf198-207ENST00000523410 FANCD2Q9BXW9 1451 aa24.16■■□□□ 1.46
C1orf198-207ENST00000523410 URB2Q14146 1524 aaKnown RBP24.03■■□□□ 1.44
C1orf198-207ENST00000523410 PRDM2Q13029 1718 aa23.98■■□□□ 1.43
C1orf198-207ENST00000523410 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
C1orf198-207ENST00000523410 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
C1orf198-207ENST00000523410 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
C1orf198-207ENST00000523410 TOPBP1Q92547 1522 aa23.72■■□□□ 1.39
C1orf198-207ENST00000523410 OSCARQ8IYS5 282 aa23.71■■□□□ 1.39
C1orf198-207ENST00000523410 IFT140Q96RY7 1462 aa23.7■■□□□ 1.38
C1orf198-207ENST00000523410 DNMBPQ6XZF7 1577 aa23.63■■□□□ 1.37
C1orf198-207ENST00000523410 EIF4G3O43432 1585 aaKnown RBP23.62■■□□□ 1.37
C1orf198-207ENST00000523410 RIMBP3CA6NJZ7 1639 aa23.58■■□□□ 1.36
C1orf198-207ENST00000523410 RIMBP3BA6NNM3 1639 aa23.58■■□□□ 1.36
C1orf198-207ENST00000523410 RIMBP3Q9UFD9 1639 aa23.58■■□□□ 1.36
C1orf198-207ENST00000523410 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
C1orf198-207ENST00000523410 TARBP1Q13395 1621 aaKnown RBP23.56■■□□□ 1.36
C1orf198-207ENST00000523410 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
C1orf198-207ENST00000523410 ARHGEF11O15085 1522 aa23.48■■□□□ 1.35
C1orf198-207ENST00000523410 CHD1O14646 1710 aa23.47■■□□□ 1.35
C1orf198-207ENST00000523410 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.34
C1orf198-207ENST00000523410 RAD54L2Q9Y4B4 1467 aa23.37■■□□□ 1.33
C1orf198-207ENST00000523410 CUX1P39880 1505 aa23.32■■□□□ 1.32
C1orf198-207ENST00000523410 FGD5Q6ZNL6 1462 aa23.31■■□□□ 1.32
C1orf198-207ENST00000523410 SOGA1O94964 1423 aa23.28■■□□□ 1.32
C1orf198-207ENST00000523410 WDR97A6NE52 1622 aa23.28■■□□□ 1.32
C1orf198-207ENST00000523410 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
C1orf198-207ENST00000523410 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.31
C1orf198-207ENST00000523410 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
C1orf198-207ENST00000523410 CLASP1Q7Z460 1538 aa23.2■■□□□ 1.3
C1orf198-207ENST00000523410 FBLN2P98095 1184 aa23.18■■□□□ 1.3
C1orf198-207ENST00000523410 CYB5RLQ6IPT4 315 aa23.17■■□□□ 1.3
C1orf198-207ENST00000523410 MAGI1Q96QZ7 1491 aaPredicted RBP23.16■■□□□ 1.3
C1orf198-207ENST00000523410 GRIN2BQ13224 1484 aa23.13■■□□□ 1.29
C1orf198-207ENST00000523410 PBRM1Q86U86 1689 aa23.12■■□□□ 1.29
C1orf198-207ENST00000523410 SYNJ1O43426 1573 aa23.1■■□□□ 1.29
C1orf198-207ENST00000523410 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.29
C1orf198-207ENST00000523410 SYNJ2O15056 1496 aa23.08■■□□□ 1.29
C1orf198-207ENST00000523410 ABCA10Q8WWZ4 1543 aa23.04■■□□□ 1.28
C1orf198-207ENST00000523410 GAPVD1Q14C86 1478 aa23.04■■□□□ 1.28
C1orf198-207ENST00000523410 CHMP7Q8WUX9 453 aaPredicted RBP23.01■■□□□ 1.27
C1orf198-207ENST00000523410 SUPT5HO00267 1087 aaKnown RBP22.93■■□□□ 1.26
C1orf198-207ENST00000523410 BIVM-ERCC5R4GMW8 1640 aa22.93■■□□□ 1.26
C1orf198-207ENST00000523410 ADAMTS12P58397 1594 aa22.9■■□□□ 1.26
C1orf198-207ENST00000523410 TOP2BQ02880 1626 aa22.9■■□□□ 1.26
C1orf198-207ENST00000523410 TRHP20396 242 aaPredicted RBP22.88■■□□□ 1.25
C1orf198-207ENST00000523410 GRIN2AQ12879 1464 aa22.86■■□□□ 1.25
C1orf198-207ENST00000523410 WRNQ14191 1432 aaPredicted RBP eCLIP22.86■■□□□ 1.25
C1orf198-207ENST00000523410 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
C1orf198-207ENST00000523410 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
C1orf198-207ENST00000523410 NUP160Q12769 1436 aa22.82■■□□□ 1.24
C1orf198-207ENST00000523410 SHROOM2Q13796 1616 aa22.76■■□□□ 1.23
C1orf198-207ENST00000523410 ERICH3Q5RHP9 1530 aa22.74■■□□□ 1.23
C1orf198-207ENST00000523410 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
C1orf198-207ENST00000523410 RUSC2Q8N2Y8 1516 aa22.59■■□□□ 1.21
C1orf198-207ENST00000523410 PRG4Q92954 1404 aaPredicted RBP22.53■■□□□ 1.2
C1orf198-207ENST00000523410 KIF13AQ9H1H9 1805 aa22.5■■□□□ 1.19
C1orf198-207ENST00000523410 JPH4Q96JJ6 628 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms