RNA–Protein interactions for RNA: ENST00000523315.1

EBF1-209, Transcript of early B cell factor 1, humanhuman

TSL 5

Gene EBF1, Length 490 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-209ENST00000523315 NISCHQ9Y2I1 1504 aa33.64■■■□□ 2.98
EBF1-209ENST00000523315 CCDC180Q9P1Z9 1646 aa29.92■■■□□ 2.38
EBF1-209ENST00000523315 ABCC9O60706 1549 aa29.91■■■□□ 2.38
EBF1-209ENST00000523315 RB1CC1Q8TDY2 1594 aa28.44■■■□□ 2.14
EBF1-209ENST00000523315 DCAF8L2P0C7V8 631 aa28.42■■■□□ 2.14
EBF1-209ENST00000523315 NACADO15069 1562 aa28.28■■■□□ 2.12
EBF1-209ENST00000523315 ZCCHC6Q5VYS8 1495 aaKnown RBP28.1■■■□□ 2.09
EBF1-209ENST00000523315 PABPN1Q86U42 306 aaKnown RBP eCLIP27.96■■■□□ 2.07
EBF1-209ENST00000523315 DNAJC5BQ9UF47 199 aa27.92■■■□□ 2.06
EBF1-209ENST00000523315 MYO15BQ96JP2 1530 aa27.91■■■□□ 2.06
EBF1-209ENST00000523315 DCAF1Q9Y4B6 1507 aa27.88■■■□□ 2.05
EBF1-209ENST00000523315 UNC13AQ9UPW8 1703 aa27.77■■■□□ 2.04
EBF1-209ENST00000523315 BICRAQ9NZM4 1560 aa27.64■■■□□ 2.01
EBF1-209ENST00000523315 SCRIBQ14160 1630 aa27.43■■□□□ 1.98
EBF1-209ENST00000523315 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
EBF1-209ENST00000523315 CC2D2AQ9P2K1 1620 aa26.96■■□□□ 1.91
EBF1-209ENST00000523315 EIF4G1Q04637 1599 aaKnown RBP26.95■■□□□ 1.9
EBF1-209ENST00000523315 CECR2Q9BXF3 1484 aa26.88■■□□□ 1.89
EBF1-209ENST00000523315 NCAPD3P42695 1498 aa26.15■■□□□ 1.78
EBF1-209ENST00000523315 ATAD2BQ9ULI0 1458 aa26.13■■□□□ 1.77
EBF1-209ENST00000523315 SMARCA4P51532 1647 aa26.13■■□□□ 1.77
EBF1-209ENST00000523315 BAZ1AQ9NRL2 1556 aaPredicted RBP26.11■■□□□ 1.77
EBF1-209ENST00000523315 SMARCA2P51531 1590 aa26.01■■□□□ 1.75
EBF1-209ENST00000523315 HMGXB3Q12766 1538 aa25.93■■□□□ 1.74
EBF1-209ENST00000523315 MROH2BQ7Z745 1585 aa25.92■■□□□ 1.74
EBF1-209ENST00000523315 BAZ1BQ9UIG0 1483 aaKnown RBP25.89■■□□□ 1.73
EBF1-209ENST00000523315 PEG3Q9GZU2 1588 aa25.82■■□□□ 1.72
EBF1-209ENST00000523315 ERCC6Q03468 1493 aa25.78■■□□□ 1.72
EBF1-209ENST00000523315 NESP48681 1621 aa25.76■■□□□ 1.71
EBF1-209ENST00000523315 RSF1Q96T23 1441 aaPredicted RBP25.71■■□□□ 1.71
EBF1-209ENST00000523315 WIZO95785 1651 aa25.64■■□□□ 1.69
EBF1-209ENST00000523315 CUX2O14529 1486 aa25.58■■□□□ 1.69
EBF1-209ENST00000523315 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
EBF1-209ENST00000523315 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
EBF1-209ENST00000523315 CADPSQ9ULU8 1353 aa25.4■■□□□ 1.66
EBF1-209ENST00000523315 DNAJC5Q9H3Z4 198 aa25.39■■□□□ 1.66
EBF1-209ENST00000523315 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
EBF1-209ENST00000523315 THOC2Q8NI27 1593 aaKnown RBP25.35■■□□□ 1.65
EBF1-209ENST00000523315 KIF21AQ7Z4S6 1674 aa25.34■■□□□ 1.65
EBF1-209ENST00000523315 SUPT5HO00267 1087 aaKnown RBP25.29■■□□□ 1.64
EBF1-209ENST00000523315 MRC2Q9UBG0 1479 aa25.16■■□□□ 1.62
EBF1-209ENST00000523315 CFTRP13569 1480 aa25.13■■□□□ 1.61
EBF1-209ENST00000523315 FANCD2Q9BXW9 1451 aa25.12■■□□□ 1.61
EBF1-209ENST00000523315 CEP164Q9UPV0 1460 aa25.1■■□□□ 1.61
EBF1-209ENST00000523315 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
EBF1-209ENST00000523315 WDR62O43379 1518 aa25.07■■□□□ 1.6
EBF1-209ENST00000523315 URB2Q14146 1524 aaKnown RBP24.91■■□□□ 1.58
EBF1-209ENST00000523315 PRDM2Q13029 1718 aa24.84■■□□□ 1.57
EBF1-209ENST00000523315 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
EBF1-209ENST00000523315 ZNF608Q9ULD9 1512 aaPredicted RBP24.6■■□□□ 1.53
EBF1-209ENST00000523315 IFT140Q96RY7 1462 aa24.58■■□□□ 1.53
EBF1-209ENST00000523315 DNMBPQ6XZF7 1577 aa24.55■■□□□ 1.52
EBF1-209ENST00000523315 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
EBF1-209ENST00000523315 OSCARQ8IYS5 282 aa24.52■■□□□ 1.52
EBF1-209ENST00000523315 TRIM41Q8WV44 630 aa24.48■■□□□ 1.51
EBF1-209ENST00000523315 POLA1P09884 1462 aaPredicted RBP24.43■■□□□ 1.5
EBF1-209ENST00000523315 AQRO60306 1485 aaKnown RBP eCLIP24.41■■□□□ 1.5
EBF1-209ENST00000523315 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
EBF1-209ENST00000523315 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.5
EBF1-209ENST00000523315 RAD54L2Q9Y4B4 1467 aa24.39■■□□□ 1.5
EBF1-209ENST00000523315 SOGA1O94964 1423 aa24.34■■□□□ 1.49
EBF1-209ENST00000523315 CUX1P39880 1505 aa24.33■■□□□ 1.49
EBF1-209ENST00000523315 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
EBF1-209ENST00000523315 TDRD9Q8NDG6 1382 aaKnown RBP24.31■■□□□ 1.48
EBF1-209ENST00000523315 WRNQ14191 1432 aaPredicted RBP eCLIP24.29■■□□□ 1.48
EBF1-209ENST00000523315 FBLN2P98095 1184 aa24.26■■□□□ 1.47
EBF1-209ENST00000523315 TOP2BQ02880 1626 aa24.2■■□□□ 1.46
EBF1-209ENST00000523315 BIVM-ERCC5R4GMW8 1640 aa24.2■■□□□ 1.46
EBF1-209ENST00000523315 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
EBF1-209ENST00000523315 CHD1O14646 1710 aa24.15■■□□□ 1.46
EBF1-209ENST00000523315 SNAPC4Q5SXM2 1469 aa24.14■■□□□ 1.46
EBF1-209ENST00000523315 RIMBP3CA6NJZ7 1639 aa24.14■■□□□ 1.46
EBF1-209ENST00000523315 RIMBP3BA6NNM3 1639 aa24.14■■□□□ 1.46
EBF1-209ENST00000523315 RIMBP3Q9UFD9 1639 aa24.14■■□□□ 1.46
EBF1-209ENST00000523315 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
EBF1-209ENST00000523315 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
EBF1-209ENST00000523315 CHMP7Q8WUX9 453 aaPredicted RBP24.06■■□□□ 1.44
EBF1-209ENST00000523315 WDR97A6NE52 1622 aa24.05■■□□□ 1.44
EBF1-209ENST00000523315 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
EBF1-209ENST00000523315 MAGI1Q96QZ7 1491 aaPredicted RBP24.01■■□□□ 1.43
EBF1-209ENST00000523315 ABCA10Q8WWZ4 1543 aa24.01■■□□□ 1.43
EBF1-209ENST00000523315 CYB5RLQ6IPT4 315 aa24■■□□□ 1.43
EBF1-209ENST00000523315 SYNJ2O15056 1496 aa23.96■■□□□ 1.43
EBF1-209ENST00000523315 ABCA5Q8WWZ7 1642 aa23.94■■□□□ 1.42
EBF1-209ENST00000523315 PBRM1Q86U86 1689 aa23.93■■□□□ 1.42
EBF1-209ENST00000523315 CLASP1Q7Z460 1538 aa23.9■■□□□ 1.42
EBF1-209ENST00000523315 ARAP1Q96P48 1450 aa23.9■■□□□ 1.42
EBF1-209ENST00000523315 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
EBF1-209ENST00000523315 GRIN2AQ12879 1464 aa23.76■■□□□ 1.39
EBF1-209ENST00000523315 ADAMTS12P58397 1594 aa23.76■■□□□ 1.39
EBF1-209ENST00000523315 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
EBF1-209ENST00000523315 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
EBF1-209ENST00000523315 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
EBF1-209ENST00000523315 CEP170Q5SW79 1584 aa23.68■■□□□ 1.38
EBF1-209ENST00000523315 TRHP20396 242 aaPredicted RBP23.67■■□□□ 1.38
EBF1-209ENST00000523315 NUP160Q12769 1436 aa23.67■■□□□ 1.38
EBF1-209ENST00000523315 ERCC6L2Q5T890 1561 aa23.62■■□□□ 1.37
EBF1-209ENST00000523315 CUL7Q14999 1698 aa23.6■■□□□ 1.37
EBF1-209ENST00000523315 IGF1RP08069 1367 aa23.56■■□□□ 1.36
EBF1-209ENST00000523315 EEA1Q15075 1411 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms