RNA–Protein interactions for RNA: ENST00000523296.1

SFTPC-209, Transcript of surfactant protein C, humanhuman

TSL 3

Gene SFTPC, Length 395 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-209ENST00000523296 NISCHQ9Y2I1 1504 aa37.88■■■■□ 3.65
SFTPC-209ENST00000523296 CCDC180Q9P1Z9 1646 aa34.01■■■■□ 3.04
SFTPC-209ENST00000523296 ABCC9O60706 1549 aa33.63■■■□□ 2.97
SFTPC-209ENST00000523296 RB1CC1Q8TDY2 1594 aa32.29■■■□□ 2.76
SFTPC-209ENST00000523296 NACADO15069 1562 aa32.15■■■□□ 2.74
SFTPC-209ENST00000523296 MYO15BQ96JP2 1530 aa31.85■■■□□ 2.69
SFTPC-209ENST00000523296 DCAF8L2P0C7V8 631 aa31.82■■■□□ 2.68
SFTPC-209ENST00000523296 DCAF1Q9Y4B6 1507 aa31.44■■■□□ 2.62
SFTPC-209ENST00000523296 ZCCHC6Q5VYS8 1495 aaKnown RBP31.41■■■□□ 2.62
SFTPC-209ENST00000523296 UNC13AQ9UPW8 1703 aa31.4■■■□□ 2.62
SFTPC-209ENST00000523296 DNAJC5BQ9UF47 199 aa31.35■■■□□ 2.61
SFTPC-209ENST00000523296 PABPN1Q86U42 306 aaKnown RBP eCLIP31.31■■■□□ 2.6
SFTPC-209ENST00000523296 BICRAQ9NZM4 1560 aa31.18■■■□□ 2.58
SFTPC-209ENST00000523296 SHROOM4Q9ULL8 1493 aa31.09■■■□□ 2.57
SFTPC-209ENST00000523296 SCRIBQ14160 1630 aa30.79■■■□□ 2.52
SFTPC-209ENST00000523296 CC2D2AQ9P2K1 1620 aa30.47■■■□□ 2.47
SFTPC-209ENST00000523296 EIF4G1Q04637 1599 aaKnown RBP30.46■■■□□ 2.47
SFTPC-209ENST00000523296 CECR2Q9BXF3 1484 aa30.38■■■□□ 2.45
SFTPC-209ENST00000523296 NCAPD3P42695 1498 aa29.64■■■□□ 2.34
SFTPC-209ENST00000523296 SMARCA2P51531 1590 aa29.52■■■□□ 2.32
SFTPC-209ENST00000523296 ATAD2BQ9ULI0 1458 aa29.49■■■□□ 2.31
SFTPC-209ENST00000523296 SMARCA4P51532 1647 aa29.49■■■□□ 2.31
SFTPC-209ENST00000523296 BAZ1AQ9NRL2 1556 aaPredicted RBP29.46■■■□□ 2.31
SFTPC-209ENST00000523296 HMGXB3Q12766 1538 aa29.44■■■□□ 2.3
SFTPC-209ENST00000523296 PEG3Q9GZU2 1588 aa29.3■■■□□ 2.28
SFTPC-209ENST00000523296 BAZ1BQ9UIG0 1483 aaKnown RBP29.23■■■□□ 2.27
SFTPC-209ENST00000523296 ERCC6Q03468 1493 aa29.16■■■□□ 2.26
SFTPC-209ENST00000523296 CUX2O14529 1486 aa29.14■■■□□ 2.26
SFTPC-209ENST00000523296 MROH2BQ7Z745 1585 aa29.08■■■□□ 2.25
SFTPC-209ENST00000523296 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
SFTPC-209ENST00000523296 NESP48681 1621 aa28.9■■■□□ 2.22
SFTPC-209ENST00000523296 DNAJC5Q9H3Z4 198 aa28.89■■■□□ 2.22
SFTPC-209ENST00000523296 PDS5BQ9NTI5 1447 aa28.82■■■□□ 2.2
SFTPC-209ENST00000523296 WIZO95785 1651 aa28.73■■■□□ 2.19
SFTPC-209ENST00000523296 CADPSQ9ULU8 1353 aa28.73■■■□□ 2.19
SFTPC-209ENST00000523296 THOC2Q8NI27 1593 aaKnown RBP28.67■■■□□ 2.18
SFTPC-209ENST00000523296 RSF1Q96T23 1441 aaPredicted RBP28.6■■■□□ 2.17
SFTPC-209ENST00000523296 KIF21AQ7Z4S6 1674 aa28.59■■■□□ 2.17
SFTPC-209ENST00000523296 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
SFTPC-209ENST00000523296 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
SFTPC-209ENST00000523296 CFTRP13569 1480 aa28.43■■■□□ 2.14
SFTPC-209ENST00000523296 CEP164Q9UPV0 1460 aa28.39■■■□□ 2.13
SFTPC-209ENST00000523296 WDR62O43379 1518 aa28.38■■■□□ 2.13
SFTPC-209ENST00000523296 FANCD2Q9BXW9 1451 aa28.34■■■□□ 2.13
SFTPC-209ENST00000523296 PRDM2Q13029 1718 aa28.17■■■□□ 2.1
SFTPC-209ENST00000523296 CCDC88BA6NC98 1476 aa28.12■■■□□ 2.09
SFTPC-209ENST00000523296 URB2Q14146 1524 aaKnown RBP28.03■■■□□ 2.08
SFTPC-209ENST00000523296 ABCC8Q09428 1581 aa27.98■■■□□ 2.07
SFTPC-209ENST00000523296 IFT140Q96RY7 1462 aa27.85■■■□□ 2.05
SFTPC-209ENST00000523296 OSCARQ8IYS5 282 aa27.84■■■□□ 2.05
SFTPC-209ENST00000523296 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
SFTPC-209ENST00000523296 DNMBPQ6XZF7 1577 aa27.76■■■□□ 2.03
SFTPC-209ENST00000523296 ZNF608Q9ULD9 1512 aaPredicted RBP27.62■■■□□ 2.01
SFTPC-209ENST00000523296 TARBP1Q13395 1621 aaKnown RBP27.55■■■□□ 2
SFTPC-209ENST00000523296 EIF4G3O43432 1585 aaKnown RBP27.53■■■□□ 2
SFTPC-209ENST00000523296 TRIM41Q8WV44 630 aa27.53■■■□□ 2
SFTPC-209ENST00000523296 POLA1P09884 1462 aaPredicted RBP27.52■■■□□ 2
SFTPC-209ENST00000523296 WDR97A6NE52 1622 aa27.49■■□□□ 1.99
SFTPC-209ENST00000523296 SOGA1O94964 1423 aa27.46■■□□□ 1.99
SFTPC-209ENST00000523296 AQRO60306 1485 aaKnown RBP eCLIP27.43■■□□□ 1.98
SFTPC-209ENST00000523296 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
SFTPC-209ENST00000523296 FGD5Q6ZNL6 1462 aa27.36■■□□□ 1.97
SFTPC-209ENST00000523296 RAD54L2Q9Y4B4 1467 aa27.34■■□□□ 1.97
SFTPC-209ENST00000523296 CUX1P39880 1505 aa27.33■■□□□ 1.97
SFTPC-209ENST00000523296 RIMBP3CA6NJZ7 1639 aa27.3■■□□□ 1.96
SFTPC-209ENST00000523296 RIMBP3BA6NNM3 1639 aa27.3■■□□□ 1.96
SFTPC-209ENST00000523296 RIMBP3Q9UFD9 1639 aa27.3■■□□□ 1.96
SFTPC-209ENST00000523296 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
SFTPC-209ENST00000523296 CHD1O14646 1710 aa27.28■■□□□ 1.96
SFTPC-209ENST00000523296 ARHGEF11O15085 1522 aa27.26■■□□□ 1.96
SFTPC-209ENST00000523296 FBLN2P98095 1184 aa27.26■■□□□ 1.95
SFTPC-209ENST00000523296 MAGI1Q96QZ7 1491 aaPredicted RBP27.25■■□□□ 1.95
SFTPC-209ENST00000523296 GRIN2BQ13224 1484 aa27.23■■□□□ 1.95
SFTPC-209ENST00000523296 CHMP7Q8WUX9 453 aaPredicted RBP27.18■■□□□ 1.94
SFTPC-209ENST00000523296 SNAPC4Q5SXM2 1469 aa27.17■■□□□ 1.94
SFTPC-209ENST00000523296 ABCA10Q8WWZ4 1543 aa27.15■■□□□ 1.94
SFTPC-209ENST00000523296 GAPVD1Q14C86 1478 aa27.13■■□□□ 1.93
SFTPC-209ENST00000523296 SYNJ2O15056 1496 aa27.12■■□□□ 1.93
SFTPC-209ENST00000523296 SYNJ1O43426 1573 aa27.11■■□□□ 1.93
SFTPC-209ENST00000523296 WRNQ14191 1432 aaPredicted RBP eCLIP27.11■■□□□ 1.93
SFTPC-209ENST00000523296 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
SFTPC-209ENST00000523296 PBRM1Q86U86 1689 aa27.05■■□□□ 1.92
SFTPC-209ENST00000523296 TOP2BQ02880 1626 aa27.03■■□□□ 1.92
SFTPC-209ENST00000523296 ABCA5Q8WWZ7 1642 aa27.03■■□□□ 1.92
SFTPC-209ENST00000523296 BIVM-ERCC5R4GMW8 1640 aa27.02■■□□□ 1.92
SFTPC-209ENST00000523296 CLASP1Q7Z460 1538 aa27.02■■□□□ 1.92
SFTPC-209ENST00000523296 ARAP1Q96P48 1450 aa26.96■■□□□ 1.91
SFTPC-209ENST00000523296 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
SFTPC-209ENST00000523296 GRIN2AQ12879 1464 aa26.83■■□□□ 1.89
SFTPC-209ENST00000523296 FHAD1B1AJZ9 1412 aa26.82■■□□□ 1.88
SFTPC-209ENST00000523296 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
SFTPC-209ENST00000523296 NUP160Q12769 1436 aa26.75■■□□□ 1.87
SFTPC-209ENST00000523296 TRHP20396 242 aaPredicted RBP26.72■■□□□ 1.87
SFTPC-209ENST00000523296 CEP170Q5SW79 1584 aa26.65■■□□□ 1.86
SFTPC-209ENST00000523296 SHROOM2Q13796 1616 aa26.61■■□□□ 1.85
SFTPC-209ENST00000523296 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
SFTPC-209ENST00000523296 JPH4Q96JJ6 628 aa26.51■■□□□ 1.83
SFTPC-209ENST00000523296 CUL7Q14999 1698 aa26.48■■□□□ 1.83
SFTPC-209ENST00000523296 IGF1RP08069 1367 aa26.47■■□□□ 1.83
SFTPC-209ENST00000523296 PRG4Q92954 1404 aaPredicted RBP26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms