RNA–Protein interactions for RNA: ENST00000523285.5

EFCAB13-211, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 4

Gene EFCAB13, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-211ENST00000523285 NISCHQ9Y2I1 1504 aa36.17■■■■□ 3.38
EFCAB13-211ENST00000523285 CCDC180Q9P1Z9 1646 aa32.29■■■□□ 2.76
EFCAB13-211ENST00000523285 ABCC9O60706 1549 aa31.76■■■□□ 2.68
EFCAB13-211ENST00000523285 RB1CC1Q8TDY2 1594 aa30.53■■■□□ 2.48
EFCAB13-211ENST00000523285 NACADO15069 1562 aa30.45■■■□□ 2.47
EFCAB13-211ENST00000523285 DCAF8L2P0C7V8 631 aa30.26■■■□□ 2.43
EFCAB13-211ENST00000523285 MYO15BQ96JP2 1530 aa30.24■■■□□ 2.43
EFCAB13-211ENST00000523285 ZCCHC6Q5VYS8 1495 aaKnown RBP30.08■■■□□ 2.41
EFCAB13-211ENST00000523285 DCAF1Q9Y4B6 1507 aa29.98■■■□□ 2.39
EFCAB13-211ENST00000523285 UNC13AQ9UPW8 1703 aa29.68■■■□□ 2.34
EFCAB13-211ENST00000523285 PABPN1Q86U42 306 aaKnown RBP eCLIP29.62■■■□□ 2.33
EFCAB13-211ENST00000523285 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
EFCAB13-211ENST00000523285 SHROOM4Q9ULL8 1493 aa29.38■■■□□ 2.29
EFCAB13-211ENST00000523285 SCRIBQ14160 1630 aa29.35■■■□□ 2.29
EFCAB13-211ENST00000523285 DNAJC5BQ9UF47 199 aa29.33■■■□□ 2.29
EFCAB13-211ENST00000523285 EIF4G1Q04637 1599 aaKnown RBP28.81■■■□□ 2.2
EFCAB13-211ENST00000523285 CC2D2AQ9P2K1 1620 aa28.73■■■□□ 2.19
EFCAB13-211ENST00000523285 CECR2Q9BXF3 1484 aa28.62■■■□□ 2.17
EFCAB13-211ENST00000523285 SMARCA4P51532 1647 aa28.1■■■□□ 2.09
EFCAB13-211ENST00000523285 NCAPD3P42695 1498 aa28.09■■■□□ 2.09
EFCAB13-211ENST00000523285 BAZ1AQ9NRL2 1556 aaPredicted RBP28.08■■■□□ 2.09
EFCAB13-211ENST00000523285 SMARCA2P51531 1590 aa28.03■■■□□ 2.08
EFCAB13-211ENST00000523285 ATAD2BQ9ULI0 1458 aa28.03■■■□□ 2.08
EFCAB13-211ENST00000523285 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
EFCAB13-211ENST00000523285 PEG3Q9GZU2 1588 aa27.88■■■□□ 2.05
EFCAB13-211ENST00000523285 MROH2BQ7Z745 1585 aa27.82■■■□□ 2.04
EFCAB13-211ENST00000523285 BAZ1BQ9UIG0 1483 aaKnown RBP27.8■■■□□ 2.04
EFCAB13-211ENST00000523285 WIZO95785 1651 aa27.47■■□□□ 1.99
EFCAB13-211ENST00000523285 ERCC6Q03468 1493 aa27.46■■□□□ 1.99
EFCAB13-211ENST00000523285 RSF1Q96T23 1441 aaPredicted RBP27.44■■□□□ 1.98
EFCAB13-211ENST00000523285 LAMC3Q9Y6N6 1575 aa27.39■■□□□ 1.97
EFCAB13-211ENST00000523285 NESP48681 1621 aa27.38■■□□□ 1.97
EFCAB13-211ENST00000523285 CUX2O14529 1486 aa27.32■■□□□ 1.96
EFCAB13-211ENST00000523285 TOP2AP11388 1531 aaKnown RBP27.26■■□□□ 1.95
EFCAB13-211ENST00000523285 CADPSQ9ULU8 1353 aa27.25■■□□□ 1.95
EFCAB13-211ENST00000523285 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
EFCAB13-211ENST00000523285 THOC2Q8NI27 1593 aaKnown RBP27.06■■□□□ 1.92
EFCAB13-211ENST00000523285 KIF21AQ7Z4S6 1674 aa27.04■■□□□ 1.92
EFCAB13-211ENST00000523285 CFTRP13569 1480 aa27.03■■□□□ 1.92
EFCAB13-211ENST00000523285 MRC2Q9UBG0 1479 aa26.94■■□□□ 1.9
EFCAB13-211ENST00000523285 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
EFCAB13-211ENST00000523285 FANCD2Q9BXW9 1451 aa26.92■■□□□ 1.9
EFCAB13-211ENST00000523285 CCDC88BA6NC98 1476 aa26.9■■□□□ 1.9
EFCAB13-211ENST00000523285 WDR62O43379 1518 aa26.85■■□□□ 1.89
EFCAB13-211ENST00000523285 PRDM2Q13029 1718 aa26.74■■□□□ 1.87
EFCAB13-211ENST00000523285 DNAJC5Q9H3Z4 198 aa26.73■■□□□ 1.87
EFCAB13-211ENST00000523285 URB2Q14146 1524 aaKnown RBP26.62■■□□□ 1.85
EFCAB13-211ENST00000523285 ABCC8Q09428 1581 aa26.53■■□□□ 1.84
EFCAB13-211ENST00000523285 SUPT5HO00267 1087 aaKnown RBP26.5■■□□□ 1.83
EFCAB13-211ENST00000523285 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
EFCAB13-211ENST00000523285 DNMBPQ6XZF7 1577 aa26.41■■□□□ 1.82
EFCAB13-211ENST00000523285 IFT140Q96RY7 1462 aa26.39■■□□□ 1.82
EFCAB13-211ENST00000523285 POLA1P09884 1462 aaPredicted RBP26.2■■□□□ 1.78
EFCAB13-211ENST00000523285 ZNF608Q9ULD9 1512 aaPredicted RBP26.19■■□□□ 1.78
EFCAB13-211ENST00000523285 TARBP1Q13395 1621 aaKnown RBP26.15■■□□□ 1.78
EFCAB13-211ENST00000523285 CUX1P39880 1505 aa26.12■■□□□ 1.77
EFCAB13-211ENST00000523285 OSCARQ8IYS5 282 aa26.11■■□□□ 1.77
EFCAB13-211ENST00000523285 SOGA1O94964 1423 aa26.11■■□□□ 1.77
EFCAB13-211ENST00000523285 EIF4G3O43432 1585 aaKnown RBP26.11■■□□□ 1.77
EFCAB13-211ENST00000523285 FGD5Q6ZNL6 1462 aa26.1■■□□□ 1.77
EFCAB13-211ENST00000523285 WDR97A6NE52 1622 aa26.05■■□□□ 1.76
EFCAB13-211ENST00000523285 RAD54L2Q9Y4B4 1467 aa26.04■■□□□ 1.76
EFCAB13-211ENST00000523285 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.76
EFCAB13-211ENST00000523285 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.75
EFCAB13-211ENST00000523285 WRNQ14191 1432 aaPredicted RBP eCLIP25.91■■□□□ 1.74
EFCAB13-211ENST00000523285 ABCA10Q8WWZ4 1543 aa25.87■■□□□ 1.73
EFCAB13-211ENST00000523285 GRIN2BQ13224 1484 aa25.86■■□□□ 1.73
EFCAB13-211ENST00000523285 TOP2BQ02880 1626 aa25.86■■□□□ 1.73
EFCAB13-211ENST00000523285 BIVM-ERCC5R4GMW8 1640 aa25.85■■□□□ 1.73
EFCAB13-211ENST00000523285 MAGI1Q96QZ7 1491 aaPredicted RBP25.84■■□□□ 1.73
EFCAB13-211ENST00000523285 SNAPC4Q5SXM2 1469 aa25.81■■□□□ 1.72
EFCAB13-211ENST00000523285 GAPVD1Q14C86 1478 aa25.8■■□□□ 1.72
EFCAB13-211ENST00000523285 FBLN2P98095 1184 aa25.79■■□□□ 1.72
EFCAB13-211ENST00000523285 SYNJ1O43426 1573 aa25.78■■□□□ 1.72
EFCAB13-211ENST00000523285 CHD1O14646 1710 aa25.78■■□□□ 1.72
EFCAB13-211ENST00000523285 ABCA5Q8WWZ7 1642 aa25.75■■□□□ 1.71
EFCAB13-211ENST00000523285 CHMP7Q8WUX9 453 aaPredicted RBP25.73■■□□□ 1.71
EFCAB13-211ENST00000523285 SYNJ2O15056 1496 aa25.72■■□□□ 1.71
EFCAB13-211ENST00000523285 PBRM1Q86U86 1689 aa25.7■■□□□ 1.7
EFCAB13-211ENST00000523285 TRIM41Q8WV44 630 aa25.67■■□□□ 1.7
EFCAB13-211ENST00000523285 ARHGEF11O15085 1522 aa25.64■■□□□ 1.7
EFCAB13-211ENST00000523285 RIMBP3CA6NJZ7 1639 aa25.64■■□□□ 1.7
EFCAB13-211ENST00000523285 RIMBP3BA6NNM3 1639 aa25.64■■□□□ 1.7
EFCAB13-211ENST00000523285 RIMBP3Q9UFD9 1639 aa25.64■■□□□ 1.7
EFCAB13-211ENST00000523285 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
EFCAB13-211ENST00000523285 CLASP1Q7Z460 1538 aa25.57■■□□□ 1.68
EFCAB13-211ENST00000523285 FHAD1B1AJZ9 1412 aa25.53■■□□□ 1.68
EFCAB13-211ENST00000523285 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
EFCAB13-211ENST00000523285 GRIN2AQ12879 1464 aa25.5■■□□□ 1.67
EFCAB13-211ENST00000523285 KIF27Q86VH2 1401 aa25.42■■□□□ 1.66
EFCAB13-211ENST00000523285 NUP160Q12769 1436 aa25.41■■□□□ 1.66
EFCAB13-211ENST00000523285 CYB5RLQ6IPT4 315 aa25.41■■□□□ 1.66
EFCAB13-211ENST00000523285 ARAP1Q96P48 1450 aa25.4■■□□□ 1.66
EFCAB13-211ENST00000523285 CEP170Q5SW79 1584 aa25.34■■□□□ 1.65
EFCAB13-211ENST00000523285 IGF1RP08069 1367 aa25.31■■□□□ 1.64
EFCAB13-211ENST00000523285 CUL7Q14999 1698 aa25.27■■□□□ 1.64
EFCAB13-211ENST00000523285 SHROOM2Q13796 1616 aa25.23■■□□□ 1.63
EFCAB13-211ENST00000523285 RUSC2Q8N2Y8 1516 aa25.16■■□□□ 1.62
EFCAB13-211ENST00000523285 CARMIL1Q5VZK9 1371 aa25.16■■□□□ 1.62
EFCAB13-211ENST00000523285 JPH4Q96JJ6 628 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms