RNA–Protein interactions for RNA: ENST00000523270.1

CNOT8-223, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 4

Gene CNOT8, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-223ENST00000523270 NISCHQ9Y2I1 1504 aa50.42■■■■■ 5.66
CNOT8-223ENST00000523270 CCDC180Q9P1Z9 1646 aa44.92■■■■■ 4.78
CNOT8-223ENST00000523270 ABCC9O60706 1549 aa44.16■■■■■ 4.66
CNOT8-223ENST00000523270 RB1CC1Q8TDY2 1594 aa42.32■■■■■ 4.37
CNOT8-223ENST00000523270 NACADO15069 1562 aa42.22■■■■■ 4.35
CNOT8-223ENST00000523270 DCAF8L2P0C7V8 631 aa42.13■■■■■ 4.33
CNOT8-223ENST00000523270 ZCCHC6Q5VYS8 1495 aaKnown RBP41.98■■■■■ 4.31
CNOT8-223ENST00000523270 MYO15BQ96JP2 1530 aa41.88■■■■■ 4.29
CNOT8-223ENST00000523270 DCAF1Q9Y4B6 1507 aa41.65■■■■■ 4.26
CNOT8-223ENST00000523270 UNC13AQ9UPW8 1703 aa41.55■■■■■ 4.24
CNOT8-223ENST00000523270 PABPN1Q86U42 306 aaKnown RBP eCLIP41.21■■■■■ 4.19
CNOT8-223ENST00000523270 BICRAQ9NZM4 1560 aa41.17■■■■■ 4.18
CNOT8-223ENST00000523270 SCRIBQ14160 1630 aa41.04■■■■■ 4.16
CNOT8-223ENST00000523270 DNAJC5BQ9UF47 199 aa40.73■■■■■ 4.11
CNOT8-223ENST00000523270 SHROOM4Q9ULL8 1493 aa40.54■■■■■ 4.08
CNOT8-223ENST00000523270 EIF4G1Q04637 1599 aaKnown RBP40.04■■■■■ 4
CNOT8-223ENST00000523270 CC2D2AQ9P2K1 1620 aa39.94■■■■□ 3.99
CNOT8-223ENST00000523270 CECR2Q9BXF3 1484 aa39.66■■■■□ 3.94
CNOT8-223ENST00000523270 SMARCA4P51532 1647 aa39.2■■■■□ 3.87
CNOT8-223ENST00000523270 BAZ1AQ9NRL2 1556 aaPredicted RBP39.06■■■■□ 3.84
CNOT8-223ENST00000523270 ATAD2BQ9ULI0 1458 aa39■■■■□ 3.83
CNOT8-223ENST00000523270 NCAPD3P42695 1498 aa38.96■■■■□ 3.83
CNOT8-223ENST00000523270 MROH2BQ7Z745 1585 aa38.91■■■■□ 3.82
CNOT8-223ENST00000523270 SMARCA2P51531 1590 aa38.9■■■■□ 3.82
CNOT8-223ENST00000523270 HMGXB3Q12766 1538 aa38.79■■■■□ 3.8
CNOT8-223ENST00000523270 PEG3Q9GZU2 1588 aa38.78■■■■□ 3.8
CNOT8-223ENST00000523270 BAZ1BQ9UIG0 1483 aaKnown RBP38.65■■■■□ 3.78
CNOT8-223ENST00000523270 WIZO95785 1651 aa38.51■■■■□ 3.76
CNOT8-223ENST00000523270 RSF1Q96T23 1441 aaPredicted RBP38.35■■■■□ 3.73
CNOT8-223ENST00000523270 NESP48681 1621 aa38.2■■■■□ 3.71
CNOT8-223ENST00000523270 TOP2AP11388 1531 aaKnown RBP38.02■■■■□ 3.68
CNOT8-223ENST00000523270 ERCC6Q03468 1493 aa38■■■■□ 3.67
CNOT8-223ENST00000523270 LAMC3Q9Y6N6 1575 aa37.97■■■■□ 3.67
CNOT8-223ENST00000523270 CADPSQ9ULU8 1353 aa37.8■■■■□ 3.64
CNOT8-223ENST00000523270 KIF21AQ7Z4S6 1674 aa37.77■■■■□ 3.64
CNOT8-223ENST00000523270 THOC2Q8NI27 1593 aaKnown RBP37.67■■■■□ 3.62
CNOT8-223ENST00000523270 PDS5BQ9NTI5 1447 aa37.66■■■■□ 3.62
CNOT8-223ENST00000523270 CUX2O14529 1486 aa37.65■■■■□ 3.62
CNOT8-223ENST00000523270 CCDC88BA6NC98 1476 aa37.58■■■■□ 3.61
CNOT8-223ENST00000523270 CFTRP13569 1480 aa37.57■■■■□ 3.6
CNOT8-223ENST00000523270 FANCD2Q9BXW9 1451 aa37.41■■■■□ 3.58
CNOT8-223ENST00000523270 MRC2Q9UBG0 1479 aa37.37■■■■□ 3.57
CNOT8-223ENST00000523270 CEP164Q9UPV0 1460 aa37.37■■■■□ 3.57
CNOT8-223ENST00000523270 PRDM2Q13029 1718 aa37.36■■■■□ 3.57
CNOT8-223ENST00000523270 WDR62O43379 1518 aa37.27■■■■□ 3.56
CNOT8-223ENST00000523270 SUPT5HO00267 1087 aaKnown RBP37.21■■■■□ 3.55
CNOT8-223ENST00000523270 URB2Q14146 1524 aaKnown RBP37.11■■■■□ 3.53
CNOT8-223ENST00000523270 TOPBP1Q92547 1522 aa36.82■■■■□ 3.48
CNOT8-223ENST00000523270 DNMBPQ6XZF7 1577 aa36.75■■■■□ 3.47
CNOT8-223ENST00000523270 DNAJC5Q9H3Z4 198 aa36.71■■■■□ 3.47
CNOT8-223ENST00000523270 ABCC8Q09428 1581 aa36.67■■■■□ 3.46
CNOT8-223ENST00000523270 IFT140Q96RY7 1462 aa36.57■■■■□ 3.45
CNOT8-223ENST00000523270 ZNF608Q9ULD9 1512 aaPredicted RBP36.53■■■■□ 3.44
CNOT8-223ENST00000523270 CUX1P39880 1505 aa36.52■■■■□ 3.44
CNOT8-223ENST00000523270 POLA1P09884 1462 aaPredicted RBP36.5■■■■□ 3.43
CNOT8-223ENST00000523270 TARBP1Q13395 1621 aaKnown RBP36.47■■■■□ 3.43
CNOT8-223ENST00000523270 FGD5Q6ZNL6 1462 aa36.38■■■■□ 3.41
CNOT8-223ENST00000523270 RAD54L2Q9Y4B4 1467 aa36.37■■■■□ 3.41
CNOT8-223ENST00000523270 EIF4G3O43432 1585 aaKnown RBP36.37■■■■□ 3.41
CNOT8-223ENST00000523270 SOGA1O94964 1423 aa36.28■■■■□ 3.4
CNOT8-223ENST00000523270 AQRO60306 1485 aaKnown RBP eCLIP36.26■■■■□ 3.47e-8■□□□□ 10.3
CNOT8-223ENST00000523270 WDR97A6NE52 1622 aa36.17■■■■□ 3.38
CNOT8-223ENST00000523270 SYNJ1O43426 1573 aa36.16■■■■□ 3.38
CNOT8-223ENST00000523270 TDRD9Q8NDG6 1382 aaKnown RBP36.15■■■■□ 3.38
CNOT8-223ENST00000523270 BIVM-ERCC5R4GMW8 1640 aa36.14■■■■□ 3.38
CNOT8-223ENST00000523270 WRNQ14191 1432 aaPredicted RBP eCLIP36.13■■■■□ 3.37
CNOT8-223ENST00000523270 TOP2BQ02880 1626 aa36.12■■■■□ 3.37
CNOT8-223ENST00000523270 OSCARQ8IYS5 282 aa36■■■■□ 3.35
CNOT8-223ENST00000523270 ABCA10Q8WWZ4 1543 aa35.99■■■■□ 3.35
CNOT8-223ENST00000523270 CHD1O14646 1710 aa35.99■■■■□ 3.35
CNOT8-223ENST00000523270 ABCA5Q8WWZ7 1642 aa35.93■■■■□ 3.34
CNOT8-223ENST00000523270 SNAPC4Q5SXM2 1469 aa35.92■■■■□ 3.34
CNOT8-223ENST00000523270 PBRM1Q86U86 1689 aa35.91■■■■□ 3.34
CNOT8-223ENST00000523270 GRIN2BQ13224 1484 aa35.88■■■■□ 3.33
CNOT8-223ENST00000523270 GAPVD1Q14C86 1478 aa35.88■■■■□ 3.33
CNOT8-223ENST00000523270 MAGI1Q96QZ7 1491 aaPredicted RBP35.8■■■■□ 3.32
CNOT8-223ENST00000523270 FBLN2P98095 1184 aa35.78■■■■□ 3.32
CNOT8-223ENST00000523270 SYNJ2O15056 1496 aa35.68■■■■□ 3.3
CNOT8-223ENST00000523270 CHMP7Q8WUX9 453 aaPredicted RBP35.62■■■■□ 3.29
CNOT8-223ENST00000523270 RIMBP3CA6NJZ7 1639 aa35.61■■■■□ 3.29
CNOT8-223ENST00000523270 RIMBP3BA6NNM3 1639 aa35.61■■■■□ 3.29
CNOT8-223ENST00000523270 RIMBP3Q9UFD9 1639 aa35.61■■■■□ 3.29
CNOT8-223ENST00000523270 ADAMTS12P58397 1594 aa35.59■■■■□ 3.29
CNOT8-223ENST00000523270 ARHGEF11O15085 1522 aa35.55■■■■□ 3.28
CNOT8-223ENST00000523270 CLASP1Q7Z460 1538 aa35.55■■■■□ 3.28
CNOT8-223ENST00000523270 ERICH3Q5RHP9 1530 aa35.54■■■■□ 3.28
CNOT8-223ENST00000523270 TRIM41Q8WV44 630 aa35.47■■■■□ 3.27
CNOT8-223ENST00000523270 GRIN2AQ12879 1464 aa35.46■■■■□ 3.27
CNOT8-223ENST00000523270 FHAD1B1AJZ9 1412 aa35.44■■■■□ 3.26
CNOT8-223ENST00000523270 CEP170Q5SW79 1584 aa35.35■■■■□ 3.25
CNOT8-223ENST00000523270 KIF27Q86VH2 1401 aa35.34■■■■□ 3.25
CNOT8-223ENST00000523270 NUP160Q12769 1436 aa35.31■■■■□ 3.24
CNOT8-223ENST00000523270 ARAP1Q96P48 1450 aa35.29■■■■□ 3.24
CNOT8-223ENST00000523270 IGF1RP08069 1367 aa35.27■■■■□ 3.24
CNOT8-223ENST00000523270 CUL7Q14999 1698 aa35.2■■■■□ 3.23
CNOT8-223ENST00000523270 CYB5RLQ6IPT4 315 aa35.15■■■■□ 3.22
CNOT8-223ENST00000523270 RUSC2Q8N2Y8 1516 aa35.12■■■■□ 3.21
CNOT8-223ENST00000523270 ERCC6L2Q5T890 1561 aa35.12■■■■□ 3.21
CNOT8-223ENST00000523270 SHROOM2Q13796 1616 aa35.11■■■■□ 3.21
CNOT8-223ENST00000523270 CARMIL1Q5VZK9 1371 aa35.04■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms