RNA–Protein interactions for RNA: ENST00000523248.1

PDGFRL-202, Transcript of platelet derived growth factor receptor like, humanhuman

TSL 3

Gene PDGFRL, Length 644 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRL-202ENST00000523248 NISCHQ9Y2I1 1504 aa33.17■■■□□ 2.9
PDGFRL-202ENST00000523248 CCDC180Q9P1Z9 1646 aa29.65■■■□□ 2.34
PDGFRL-202ENST00000523248 ABCC9O60706 1549 aa29.6■■■□□ 2.33
PDGFRL-202ENST00000523248 RB1CC1Q8TDY2 1594 aa28.18■■■□□ 2.1
PDGFRL-202ENST00000523248 NACADO15069 1562 aa28.04■■■□□ 2.08
PDGFRL-202ENST00000523248 DCAF8L2P0C7V8 631 aa27.87■■■□□ 2.05
PDGFRL-202ENST00000523248 DNAJC5BQ9UF47 199 aa27.8■■■□□ 2.04
PDGFRL-202ENST00000523248 MYO15BQ96JP2 1530 aa27.75■■■□□ 2.03
PDGFRL-202ENST00000523248 PABPN1Q86U42 306 aaKnown RBP eCLIP27.61■■■□□ 2.01
PDGFRL-202ENST00000523248 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
PDGFRL-202ENST00000523248 ZCCHC6Q5VYS8 1495 aaKnown RBP27.51■■□□□ 1.99
PDGFRL-202ENST00000523248 BICRAQ9NZM4 1560 aa27.43■■□□□ 1.98
PDGFRL-202ENST00000523248 DCAF1Q9Y4B6 1507 aa27.41■■□□□ 1.98
PDGFRL-202ENST00000523248 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
PDGFRL-202ENST00000523248 SCRIBQ14160 1630 aa27.02■■□□□ 1.92
PDGFRL-202ENST00000523248 CC2D2AQ9P2K1 1620 aa26.73■■□□□ 1.87
PDGFRL-202ENST00000523248 EIF4G1Q04637 1599 aaKnown RBP26.71■■□□□ 1.87
PDGFRL-202ENST00000523248 CECR2Q9BXF3 1484 aa26.66■■□□□ 1.86
PDGFRL-202ENST00000523248 NCAPD3P42695 1498 aa25.95■■□□□ 1.74
PDGFRL-202ENST00000523248 ATAD2BQ9ULI0 1458 aa25.86■■□□□ 1.73
PDGFRL-202ENST00000523248 SMARCA4P51532 1647 aa25.81■■□□□ 1.72
PDGFRL-202ENST00000523248 SMARCA2P51531 1590 aa25.74■■□□□ 1.71
PDGFRL-202ENST00000523248 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
PDGFRL-202ENST00000523248 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
PDGFRL-202ENST00000523248 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
PDGFRL-202ENST00000523248 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
PDGFRL-202ENST00000523248 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
PDGFRL-202ENST00000523248 ERCC6Q03468 1493 aa25.5■■□□□ 1.67
PDGFRL-202ENST00000523248 CUX2O14529 1486 aa25.48■■□□□ 1.67
PDGFRL-202ENST00000523248 NESP48681 1621 aa25.48■■□□□ 1.67
PDGFRL-202ENST00000523248 DNAJC5Q9H3Z4 198 aa25.41■■□□□ 1.66
PDGFRL-202ENST00000523248 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
PDGFRL-202ENST00000523248 WIZO95785 1651 aa25.21■■□□□ 1.63
PDGFRL-202ENST00000523248 THOC2Q8NI27 1593 aaKnown RBP25.18■■□□□ 1.62
PDGFRL-202ENST00000523248 CADPSQ9ULU8 1353 aa25.15■■□□□ 1.62
PDGFRL-202ENST00000523248 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
PDGFRL-202ENST00000523248 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
PDGFRL-202ENST00000523248 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
PDGFRL-202ENST00000523248 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
PDGFRL-202ENST00000523248 TOP2AP11388 1531 aaKnown RBP24.91■■□□□ 1.58
PDGFRL-202ENST00000523248 CFTRP13569 1480 aa24.89■■□□□ 1.57
PDGFRL-202ENST00000523248 WDR62O43379 1518 aa24.87■■□□□ 1.57
PDGFRL-202ENST00000523248 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.56
PDGFRL-202ENST00000523248 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
PDGFRL-202ENST00000523248 CCDC88BA6NC98 1476 aa24.67■■□□□ 1.54
PDGFRL-202ENST00000523248 URB2Q14146 1524 aaKnown RBP24.65■■□□□ 1.54
PDGFRL-202ENST00000523248 PRDM2Q13029 1718 aa24.5■■□□□ 1.51
PDGFRL-202ENST00000523248 TOPBP1Q92547 1522 aa24.38■■□□□ 1.49
PDGFRL-202ENST00000523248 IFT140Q96RY7 1462 aa24.35■■□□□ 1.49
PDGFRL-202ENST00000523248 OSCARQ8IYS5 282 aa24.34■■□□□ 1.49
PDGFRL-202ENST00000523248 ZNF608Q9ULD9 1512 aaPredicted RBP24.33■■□□□ 1.49
PDGFRL-202ENST00000523248 ABCC8Q09428 1581 aa24.3■■□□□ 1.48
PDGFRL-202ENST00000523248 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
PDGFRL-202ENST00000523248 TRIM41Q8WV44 630 aa24.24■■□□□ 1.47
PDGFRL-202ENST00000523248 TARBP1Q13395 1621 aaKnown RBP24.16■■□□□ 1.46
PDGFRL-202ENST00000523248 POLA1P09884 1462 aaPredicted RBP24.14■■□□□ 1.46
PDGFRL-202ENST00000523248 EIF4G3O43432 1585 aaKnown RBP24.13■■□□□ 1.45
PDGFRL-202ENST00000523248 AQRO60306 1485 aaKnown RBP eCLIP24.12■■□□□ 1.45
PDGFRL-202ENST00000523248 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
PDGFRL-202ENST00000523248 SOGA1O94964 1423 aa24.02■■□□□ 1.44
PDGFRL-202ENST00000523248 CUX1P39880 1505 aa24■■□□□ 1.43
PDGFRL-202ENST00000523248 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
PDGFRL-202ENST00000523248 TDRD9Q8NDG6 1382 aaKnown RBP23.98■■□□□ 1.43
PDGFRL-202ENST00000523248 RIMBP3CA6NJZ7 1639 aa23.98■■□□□ 1.43
PDGFRL-202ENST00000523248 RIMBP3BA6NNM3 1639 aa23.98■■□□□ 1.43
PDGFRL-202ENST00000523248 RIMBP3Q9UFD9 1639 aa23.98■■□□□ 1.43
PDGFRL-202ENST00000523248 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
PDGFRL-202ENST00000523248 ARHGEF11O15085 1522 aa23.94■■□□□ 1.42
PDGFRL-202ENST00000523248 CHD1O14646 1710 aa23.9■■□□□ 1.42
PDGFRL-202ENST00000523248 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
PDGFRL-202ENST00000523248 FBLN2P98095 1184 aa23.87■■□□□ 1.41
PDGFRL-202ENST00000523248 SNAPC4Q5SXM2 1469 aa23.85■■□□□ 1.41
PDGFRL-202ENST00000523248 GRIN2BQ13224 1484 aa23.8■■□□□ 1.4
PDGFRL-202ENST00000523248 MAGI1Q96QZ7 1491 aaPredicted RBP23.79■■□□□ 1.4
PDGFRL-202ENST00000523248 CYB5RLQ6IPT4 315 aa23.75■■□□□ 1.39
PDGFRL-202ENST00000523248 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
PDGFRL-202ENST00000523248 CHMP7Q8WUX9 453 aaPredicted RBP23.74■■□□□ 1.39
PDGFRL-202ENST00000523248 ARAP1Q96P48 1450 aa23.74■■□□□ 1.39
PDGFRL-202ENST00000523248 GAPVD1Q14C86 1478 aa23.73■■□□□ 1.39
PDGFRL-202ENST00000523248 CLASP1Q7Z460 1538 aa23.72■■□□□ 1.39
PDGFRL-202ENST00000523248 SYNJ2O15056 1496 aa23.71■■□□□ 1.39
PDGFRL-202ENST00000523248 ABCA5Q8WWZ7 1642 aa23.67■■□□□ 1.38
PDGFRL-202ENST00000523248 WRNQ14191 1432 aaPredicted RBP eCLIP23.65■■□□□ 1.38
PDGFRL-202ENST00000523248 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
PDGFRL-202ENST00000523248 PBRM1Q86U86 1689 aa23.64■■□□□ 1.37
PDGFRL-202ENST00000523248 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
PDGFRL-202ENST00000523248 BIVM-ERCC5R4GMW8 1640 aa23.59■■□□□ 1.37
PDGFRL-202ENST00000523248 GRIN2AQ12879 1464 aa23.49■■□□□ 1.35
PDGFRL-202ENST00000523248 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
PDGFRL-202ENST00000523248 NUP160Q12769 1436 aa23.45■■□□□ 1.34
PDGFRL-202ENST00000523248 FHAD1B1AJZ9 1412 aa23.44■■□□□ 1.34
PDGFRL-202ENST00000523248 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
PDGFRL-202ENST00000523248 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
PDGFRL-202ENST00000523248 TRHP20396 242 aaPredicted RBP23.4■■□□□ 1.34
PDGFRL-202ENST00000523248 ERCC6L2Q5T890 1561 aa23.36■■□□□ 1.33
PDGFRL-202ENST00000523248 SHROOM2Q13796 1616 aa23.3■■□□□ 1.32
PDGFRL-202ENST00000523248 IGF1RP08069 1367 aa23.21■■□□□ 1.31
PDGFRL-202ENST00000523248 JPH4Q96JJ6 628 aa23.2■■□□□ 1.3
PDGFRL-202ENST00000523248 PRG4Q92954 1404 aaPredicted RBP23.18■■□□□ 1.3
PDGFRL-202ENST00000523248 KIF27Q86VH2 1401 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms