RNA–Protein interactions for RNA: ENST00000523203.5

CSNK1A1-208, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-208ENST00000523203 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
CSNK1A1-208ENST00000523203 ABCC9O60706 1549 aa23.08■■□□□ 1.29
CSNK1A1-208ENST00000523203 CCDC180Q9P1Z9 1646 aa23.02■■□□□ 1.28
CSNK1A1-208ENST00000523203 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.11
CSNK1A1-208ENST00000523203 NACADO15069 1562 aa21.78■■□□□ 1.08
CSNK1A1-208ENST00000523203 DCAF8L2P0C7V8 631 aa21.73■■□□□ 1.07
CSNK1A1-208ENST00000523203 DNAJC5BQ9UF47 199 aa21.7■■□□□ 1.06
CSNK1A1-208ENST00000523203 PABPN1Q86U42 306 aaKnown RBP eCLIP21.5■■□□□ 1.03
CSNK1A1-208ENST00000523203 UNC13AQ9UPW8 1703 aa21.46■■□□□ 1.03
CSNK1A1-208ENST00000523203 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
CSNK1A1-208ENST00000523203 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
CSNK1A1-208ENST00000523203 ZCCHC6Q5VYS8 1495 aaKnown RBP21.2■□□□□ 0.98
CSNK1A1-208ENST00000523203 DCAF1Q9Y4B6 1507 aa21.14■□□□□ 0.98
CSNK1A1-208ENST00000523203 SHROOM4Q9ULL8 1493 aa21■□□□□ 0.95
CSNK1A1-208ENST00000523203 SCRIBQ14160 1630 aa20.98■□□□□ 0.95
CSNK1A1-208ENST00000523203 CC2D2AQ9P2K1 1620 aa20.86■□□□□ 0.93
CSNK1A1-208ENST00000523203 CECR2Q9BXF3 1484 aa20.81■□□□□ 0.92
CSNK1A1-208ENST00000523203 EIF4G1Q04637 1599 aaKnown RBP20.78■□□□□ 0.92
CSNK1A1-208ENST00000523203 NCAPD3P42695 1498 aa20.1■□□□□ 0.81
CSNK1A1-208ENST00000523203 ATAD2BQ9ULI0 1458 aa20.03■□□□□ 0.8
CSNK1A1-208ENST00000523203 DNAJC5Q9H3Z4 198 aa20■□□□□ 0.79
CSNK1A1-208ENST00000523203 SMARCA4P51532 1647 aa20■□□□□ 0.79
CSNK1A1-208ENST00000523203 SMARCA2P51531 1590 aa20■□□□□ 0.79
CSNK1A1-208ENST00000523203 ERCC6Q03468 1493 aa19.97■□□□□ 0.79
CSNK1A1-208ENST00000523203 HMGXB3Q12766 1538 aa19.94■□□□□ 0.78
CSNK1A1-208ENST00000523203 CUX2O14529 1486 aa19.92■□□□□ 0.78
CSNK1A1-208ENST00000523203 BAZ1AQ9NRL2 1556 aaPredicted RBP19.9■□□□□ 0.78
CSNK1A1-208ENST00000523203 BAZ1BQ9UIG0 1483 aaKnown RBP19.85■□□□□ 0.77
CSNK1A1-208ENST00000523203 NESP48681 1621 aa19.8■□□□□ 0.76
CSNK1A1-208ENST00000523203 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
CSNK1A1-208ENST00000523203 MROH2BQ7Z745 1585 aa19.74■□□□□ 0.75
CSNK1A1-208ENST00000523203 LAMC3Q9Y6N6 1575 aa19.67■□□□□ 0.74
CSNK1A1-208ENST00000523203 THOC2Q8NI27 1593 aaKnown RBP19.6■□□□□ 0.73
CSNK1A1-208ENST00000523203 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.72
CSNK1A1-208ENST00000523203 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
CSNK1A1-208ENST00000523203 WIZO95785 1651 aa19.51■□□□□ 0.71
CSNK1A1-208ENST00000523203 CADPSQ9ULU8 1353 aa19.5■□□□□ 0.71
CSNK1A1-208ENST00000523203 MRC2Q9UBG0 1479 aa19.39■□□□□ 0.69
CSNK1A1-208ENST00000523203 WDR62O43379 1518 aa19.32■□□□□ 0.68
CSNK1A1-208ENST00000523203 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
CSNK1A1-208ENST00000523203 RSF1Q96T23 1441 aaPredicted RBP19.31■□□□□ 0.68
CSNK1A1-208ENST00000523203 FANCD2Q9BXW9 1451 aa19.28■□□□□ 0.68
CSNK1A1-208ENST00000523203 CFTRP13569 1480 aa19.25■□□□□ 0.67
CSNK1A1-208ENST00000523203 TOP2AP11388 1531 aaKnown RBP19.25■□□□□ 0.67
CSNK1A1-208ENST00000523203 TRIM41Q8WV44 630 aa19.13■□□□□ 0.65
CSNK1A1-208ENST00000523203 URB2Q14146 1524 aaKnown RBP19.1■□□□□ 0.65
CSNK1A1-208ENST00000523203 PRDM2Q13029 1718 aa19.09■□□□□ 0.65
CSNK1A1-208ENST00000523203 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
CSNK1A1-208ENST00000523203 OSCARQ8IYS5 282 aa19.04■□□□□ 0.64
CSNK1A1-208ENST00000523203 IFT140Q96RY7 1462 aa18.92■□□□□ 0.62
CSNK1A1-208ENST00000523203 TOPBP1Q92547 1522 aa18.9■□□□□ 0.62
CSNK1A1-208ENST00000523203 ZNF608Q9ULD9 1512 aaPredicted RBP18.89■□□□□ 0.61
CSNK1A1-208ENST00000523203 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
CSNK1A1-208ENST00000523203 DNMBPQ6XZF7 1577 aa18.83■□□□□ 0.6
CSNK1A1-208ENST00000523203 EIF4G3O43432 1585 aaKnown RBP18.77■□□□□ 0.6
CSNK1A1-208ENST00000523203 RIMBP3CA6NJZ7 1639 aa18.77■□□□□ 0.6
CSNK1A1-208ENST00000523203 RIMBP3BA6NNM3 1639 aa18.77■□□□□ 0.6
CSNK1A1-208ENST00000523203 RIMBP3Q9UFD9 1639 aa18.77■□□□□ 0.6
CSNK1A1-208ENST00000523203 TARBP1Q13395 1621 aaKnown RBP18.73■□□□□ 0.59
CSNK1A1-208ENST00000523203 AQRO60306 1485 aaKnown RBP eCLIP18.72■□□□□ 0.593e-10■■■□□ 18.9
CSNK1A1-208ENST00000523203 POLA1P09884 1462 aaPredicted RBP18.7■□□□□ 0.58
CSNK1A1-208ENST00000523203 ARHGEF11O15085 1522 aa18.69■□□□□ 0.58
CSNK1A1-208ENST00000523203 CHD1O14646 1710 aa18.68■□□□□ 0.58
CSNK1A1-208ENST00000523203 FBLN2P98095 1184 aa18.66■□□□□ 0.58
CSNK1A1-208ENST00000523203 SOGA1O94964 1423 aa18.64■□□□□ 0.57
CSNK1A1-208ENST00000523203 RAD54L2Q9Y4B4 1467 aa18.64■□□□□ 0.57
CSNK1A1-208ENST00000523203 CYB5RLQ6IPT4 315 aa18.61■□□□□ 0.57
CSNK1A1-208ENST00000523203 TDRD9Q8NDG6 1382 aaKnown RBP18.6■□□□□ 0.57
CSNK1A1-208ENST00000523203 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.56
CSNK1A1-208ENST00000523203 CUX1P39880 1505 aa18.55■□□□□ 0.56
CSNK1A1-208ENST00000523203 WDR97A6NE52 1622 aa18.55■□□□□ 0.56
CSNK1A1-208ENST00000523203 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.56
CSNK1A1-208ENST00000523203 CHMP7Q8WUX9 453 aaPredicted RBP18.51■□□□□ 0.55
CSNK1A1-208ENST00000523203 ARAP1Q96P48 1450 aa18.5■□□□□ 0.55
CSNK1A1-208ENST00000523203 GRIN2BQ13224 1484 aa18.48■□□□□ 0.55
CSNK1A1-208ENST00000523203 MAGI1Q96QZ7 1491 aaPredicted RBP18.47■□□□□ 0.55
CSNK1A1-208ENST00000523203 SUPT5HO00267 1087 aaKnown RBP18.47■□□□□ 0.55
CSNK1A1-208ENST00000523203 SYNJ1O43426 1573 aa18.44■□□□□ 0.54
CSNK1A1-208ENST00000523203 TRHP20396 242 aaPredicted RBP18.44■□□□□ 0.54
CSNK1A1-208ENST00000523203 CLASP1Q7Z460 1538 aa18.42■□□□□ 0.54
CSNK1A1-208ENST00000523203 SYNJ2O15056 1496 aa18.41■□□□□ 0.54
CSNK1A1-208ENST00000523203 GAPVD1Q14C86 1478 aa18.41■□□□□ 0.54
CSNK1A1-208ENST00000523203 PBRM1Q86U86 1689 aa18.41■□□□□ 0.54
CSNK1A1-208ENST00000523203 ABCA10Q8WWZ4 1543 aa18.36■□□□□ 0.53
CSNK1A1-208ENST00000523203 ABCA5Q8WWZ7 1642 aa18.33■□□□□ 0.52
CSNK1A1-208ENST00000523203 WRNQ14191 1432 aaPredicted RBP eCLIP18.3■□□□□ 0.52
CSNK1A1-208ENST00000523203 TOP2BQ02880 1626 aa18.24■□□□□ 0.51
CSNK1A1-208ENST00000523203 BIVM-ERCC5R4GMW8 1640 aa18.24■□□□□ 0.51
CSNK1A1-208ENST00000523203 GRIN2AQ12879 1464 aa18.22■□□□□ 0.51
CSNK1A1-208ENST00000523203 ADAMTS12P58397 1594 aa18.2■□□□□ 0.5
CSNK1A1-208ENST00000523203 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
CSNK1A1-208ENST00000523203 NUP160Q12769 1436 aa18.15■□□□□ 0.5
CSNK1A1-208ENST00000523203 CEP170Q5SW79 1584 aa18.15■□□□□ 0.5
CSNK1A1-208ENST00000523203 ERICH3Q5RHP9 1530 aa18.14■□□□□ 0.49
CSNK1A1-208ENST00000523203 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
CSNK1A1-208ENST00000523203 SHROOM2Q13796 1616 aa18.09■□□□□ 0.49
CSNK1A1-208ENST00000523203 JPH4Q96JJ6 628 aa18.02■□□□□ 0.48
CSNK1A1-208ENST00000523203 PRG4Q92954 1404 aaPredicted RBP18.01■□□□□ 0.47
CSNK1A1-208ENST00000523203 AEBP2Q6ZN18 517 aaPredicted RBP17.96■□□□□ 0.47
CSNK1A1-208ENST00000523203 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms