RNA–Protein interactions for RNA: ENST00000523155.1

IGKV3-25-201, Transcript of immunoglobulin kappa variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGKV3-25, Length 253 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3-25-201ENST00000523155 NISCHQ9Y2I1 1504 aa22.07■■□□□ 1.12
IGKV3-25-201ENST00000523155 CCDC180Q9P1Z9 1646 aa19.84■□□□□ 0.77
IGKV3-25-201ENST00000523155 ABCC9O60706 1549 aa19.44■□□□□ 0.7
IGKV3-25-201ENST00000523155 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
IGKV3-25-201ENST00000523155 NACADO15069 1562 aa18.6■□□□□ 0.57
IGKV3-25-201ENST00000523155 MYO15BQ96JP2 1530 aa18.44■□□□□ 0.54
IGKV3-25-201ENST00000523155 ZCCHC6Q5VYS8 1495 aaKnown RBP18.39■□□□□ 0.53
IGKV3-25-201ENST00000523155 DCAF8L2P0C7V8 631 aa18.36■□□□□ 0.53
IGKV3-25-201ENST00000523155 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
IGKV3-25-201ENST00000523155 DCAF1Q9Y4B6 1507 aa18.28■□□□□ 0.52
IGKV3-25-201ENST00000523155 BICRAQ9NZM4 1560 aa18.12■□□□□ 0.49
IGKV3-25-201ENST00000523155 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
IGKV3-25-201ENST00000523155 SCRIBQ14160 1630 aa18.02■□□□□ 0.48
IGKV3-25-201ENST00000523155 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
IGKV3-25-201ENST00000523155 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
IGKV3-25-201ENST00000523155 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
IGKV3-25-201ENST00000523155 CC2D2AQ9P2K1 1620 aa17.63■□□□□ 0.41
IGKV3-25-201ENST00000523155 CECR2Q9BXF3 1484 aa17.49■□□□□ 0.39
IGKV3-25-201ENST00000523155 SMARCA4P51532 1647 aa17.23■□□□□ 0.35
IGKV3-25-201ENST00000523155 BAZ1AQ9NRL2 1556 aaPredicted RBP17.16■□□□□ 0.34
IGKV3-25-201ENST00000523155 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
IGKV3-25-201ENST00000523155 NCAPD3P42695 1498 aa17.11■□□□□ 0.33
IGKV3-25-201ENST00000523155 ATAD2BQ9ULI0 1458 aa17.1■□□□□ 0.33
IGKV3-25-201ENST00000523155 HMGXB3Q12766 1538 aa17.1■□□□□ 0.33
IGKV3-25-201ENST00000523155 PEG3Q9GZU2 1588 aa17.05■□□□□ 0.32
IGKV3-25-201ENST00000523155 MROH2BQ7Z745 1585 aa17.01■□□□□ 0.31
IGKV3-25-201ENST00000523155 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
IGKV3-25-201ENST00000523155 WIZO95785 1651 aa16.86■□□□□ 0.29
IGKV3-25-201ENST00000523155 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
IGKV3-25-201ENST00000523155 NESP48681 1621 aa16.78■□□□□ 0.28
IGKV3-25-201ENST00000523155 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.27
IGKV3-25-201ENST00000523155 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
IGKV3-25-201ENST00000523155 CUX2O14529 1486 aa16.7■□□□□ 0.26
IGKV3-25-201ENST00000523155 KIF21AQ7Z4S6 1674 aa16.68■□□□□ 0.26
IGKV3-25-201ENST00000523155 TOP2AP11388 1531 aaKnown RBP16.67■□□□□ 0.26
IGKV3-25-201ENST00000523155 THOC2Q8NI27 1593 aaKnown RBP16.65■□□□□ 0.26
IGKV3-25-201ENST00000523155 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
IGKV3-25-201ENST00000523155 CADPSQ9ULU8 1353 aa16.58■□□□□ 0.24
IGKV3-25-201ENST00000523155 PRDM2Q13029 1718 aa16.54■□□□□ 0.24
IGKV3-25-201ENST00000523155 CFTRP13569 1480 aa16.48■□□□□ 0.23
IGKV3-25-201ENST00000523155 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
IGKV3-25-201ENST00000523155 CEP164Q9UPV0 1460 aa16.46■□□□□ 0.23
IGKV3-25-201ENST00000523155 WDR62O43379 1518 aa16.45■□□□□ 0.22
IGKV3-25-201ENST00000523155 FANCD2Q9BXW9 1451 aa16.44■□□□□ 0.22
IGKV3-25-201ENST00000523155 CCDC88BA6NC98 1476 aa16.4■□□□□ 0.22
IGKV3-25-201ENST00000523155 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
IGKV3-25-201ENST00000523155 DNAJC5Q9H3Z4 198 aa16.28■□□□□ 0.2
IGKV3-25-201ENST00000523155 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
IGKV3-25-201ENST00000523155 TOPBP1Q92547 1522 aa16.17■□□□□ 0.18
IGKV3-25-201ENST00000523155 ABCC8Q09428 1581 aa16.14■□□□□ 0.17
IGKV3-25-201ENST00000523155 IFT140Q96RY7 1462 aa16.1■□□□□ 0.17
IGKV3-25-201ENST00000523155 SUPT5HO00267 1087 aaKnown RBP16.07■□□□□ 0.16
IGKV3-25-201ENST00000523155 EIF4G3O43432 1585 aaKnown RBP16.05■□□□□ 0.16
IGKV3-25-201ENST00000523155 TARBP1Q13395 1621 aaKnown RBP16.04■□□□□ 0.16
IGKV3-25-201ENST00000523155 ZNF608Q9ULD9 1512 aaPredicted RBP16.03■□□□□ 0.16
IGKV3-25-201ENST00000523155 POLA1P09884 1462 aaPredicted RBP16.01■□□□□ 0.15
IGKV3-25-201ENST00000523155 CUX1P39880 1505 aa15.98■□□□□ 0.15
IGKV3-25-201ENST00000523155 WDR97A6NE52 1622 aa15.95■□□□□ 0.14
IGKV3-25-201ENST00000523155 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
IGKV3-25-201ENST00000523155 CHD1O14646 1710 aa15.92■□□□□ 0.14
IGKV3-25-201ENST00000523155 RAD54L2Q9Y4B4 1467 aa15.91■□□□□ 0.14
IGKV3-25-201ENST00000523155 SOGA1O94964 1423 aa15.89■□□□□ 0.13
IGKV3-25-201ENST00000523155 AQRO60306 1485 aaKnown RBP eCLIP15.88■□□□□ 0.13
IGKV3-25-201ENST00000523155 BIVM-ERCC5R4GMW8 1640 aa15.86■□□□□ 0.13
IGKV3-25-201ENST00000523155 OSCARQ8IYS5 282 aa15.86■□□□□ 0.13
IGKV3-25-201ENST00000523155 PBRM1Q86U86 1689 aa15.86■□□□□ 0.13
IGKV3-25-201ENST00000523155 TOP2BQ02880 1626 aa15.83■□□□□ 0.13
IGKV3-25-201ENST00000523155 SYNJ1O43426 1573 aa15.81■□□□□ 0.12
IGKV3-25-201ENST00000523155 ABCA5Q8WWZ7 1642 aa15.8■□□□□ 0.12
IGKV3-25-201ENST00000523155 TDRD9Q8NDG6 1382 aaKnown RBP15.8■□□□□ 0.12
IGKV3-25-201ENST00000523155 SNAPC4Q5SXM2 1469 aa15.79■□□□□ 0.12
IGKV3-25-201ENST00000523155 ABCA10Q8WWZ4 1543 aa15.78■□□□□ 0.12
IGKV3-25-201ENST00000523155 WRNQ14191 1432 aaPredicted RBP eCLIP15.78■□□□□ 0.12
IGKV3-25-201ENST00000523155 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
IGKV3-25-201ENST00000523155 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
IGKV3-25-201ENST00000523155 RIMBP3CA6NJZ7 1639 aa15.77■□□□□ 0.12
IGKV3-25-201ENST00000523155 RIMBP3BA6NNM3 1639 aa15.77■□□□□ 0.12
IGKV3-25-201ENST00000523155 RIMBP3Q9UFD9 1639 aa15.77■□□□□ 0.12
IGKV3-25-201ENST00000523155 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
IGKV3-25-201ENST00000523155 ARHGEF11O15085 1522 aa15.72■□□□□ 0.11
IGKV3-25-201ENST00000523155 SYNJ2O15056 1496 aa15.7■□□□□ 0.1
IGKV3-25-201ENST00000523155 CLASP1Q7Z460 1538 aa15.68■□□□□ 0.1
IGKV3-25-201ENST00000523155 FBLN2P98095 1184 aa15.68■□□□□ 0.1
IGKV3-25-201ENST00000523155 ADAMTS12P58397 1594 aa15.67■□□□□ 0.1
IGKV3-25-201ENST00000523155 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
IGKV3-25-201ENST00000523155 CHMP7Q8WUX9 453 aaPredicted RBP15.62■□□□□ 0.09
IGKV3-25-201ENST00000523155 ERICH3Q5RHP9 1530 aa15.62■□□□□ 0.09
IGKV3-25-201ENST00000523155 GRIN2AQ12879 1464 aa15.58■□□□□ 0.08
IGKV3-25-201ENST00000523155 ARAP1Q96P48 1450 aa15.58■□□□□ 0.08
IGKV3-25-201ENST00000523155 FHAD1B1AJZ9 1412 aa15.55■□□□□ 0.08
IGKV3-25-201ENST00000523155 CEP170Q5SW79 1584 aa15.54■□□□□ 0.08
IGKV3-25-201ENST00000523155 NUP160Q12769 1436 aa15.51■□□□□ 0.07
IGKV3-25-201ENST00000523155 CUL7Q14999 1698 aa15.5■□□□□ 0.07
IGKV3-25-201ENST00000523155 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
IGKV3-25-201ENST00000523155 KIF27Q86VH2 1401 aa15.45■□□□□ 0.06
IGKV3-25-201ENST00000523155 RUSC2Q8N2Y8 1516 aa15.45■□□□□ 0.06
IGKV3-25-201ENST00000523155 CYB5RLQ6IPT4 315 aa15.45■□□□□ 0.06
IGKV3-25-201ENST00000523155 ERCC6L2Q5T890 1561 aa15.41■□□□□ 0.06
IGKV3-25-201ENST00000523155 IGF1RP08069 1367 aa15.36■□□□□ 0.05
IGKV3-25-201ENST00000523155 PRG4Q92954 1404 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms