RNA–Protein interactions for RNA: ENST00000523134.1

PKMP4-201, Transcript of pyruvate kinase M1/2 pseudogene 4, humanhuman

BASIC

Gene PKMP4, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMP4-201ENST00000523134 NISCHQ9Y2I1 1504 aa29.15■■■□□ 2.26
PKMP4-201ENST00000523134 CCDC180Q9P1Z9 1646 aa25.85■■□□□ 1.73
PKMP4-201ENST00000523134 ABCC9O60706 1549 aa24.82■■□□□ 1.56
PKMP4-201ENST00000523134 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
PKMP4-201ENST00000523134 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
PKMP4-201ENST00000523134 NACADO15069 1562 aa24.13■■□□□ 1.45
PKMP4-201ENST00000523134 MYO15BQ96JP2 1530 aa24.1■■□□□ 1.45
PKMP4-201ENST00000523134 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
PKMP4-201ENST00000523134 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
PKMP4-201ENST00000523134 UNC13AQ9UPW8 1703 aa23.68■■□□□ 1.38
PKMP4-201ENST00000523134 SCRIBQ14160 1630 aa23.58■■□□□ 1.36
PKMP4-201ENST00000523134 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
PKMP4-201ENST00000523134 SHROOM4Q9ULL8 1493 aa23.2■■□□□ 1.3
PKMP4-201ENST00000523134 PABPN1Q86U42 306 aaKnown RBP eCLIP23.17■■□□□ 1.3
PKMP4-201ENST00000523134 EIF4G1Q04637 1599 aaKnown RBP22.69■■□□□ 1.22
PKMP4-201ENST00000523134 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
PKMP4-201ENST00000523134 SMARCA4P51532 1647 aa22.59■■□□□ 1.21
PKMP4-201ENST00000523134 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.2
PKMP4-201ENST00000523134 CC2D2AQ9P2K1 1620 aa22.52■■□□□ 1.2
PKMP4-201ENST00000523134 MROH2BQ7Z745 1585 aa22.47■■□□□ 1.19
PKMP4-201ENST00000523134 DNAJC5BQ9UF47 199 aa22.35■■□□□ 1.17
PKMP4-201ENST00000523134 PEG3Q9GZU2 1588 aa22.34■■□□□ 1.17
PKMP4-201ENST00000523134 SMARCA2P51531 1590 aa22.33■■□□□ 1.16
PKMP4-201ENST00000523134 RSF1Q96T23 1441 aaPredicted RBP22.31■■□□□ 1.16
PKMP4-201ENST00000523134 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
PKMP4-201ENST00000523134 WIZO95785 1651 aa22.3■■□□□ 1.16
PKMP4-201ENST00000523134 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
PKMP4-201ENST00000523134 NCAPD3P42695 1498 aa22.21■■□□□ 1.15
PKMP4-201ENST00000523134 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
PKMP4-201ENST00000523134 TOP2AP11388 1531 aaKnown RBP22.06■■□□□ 1.12
PKMP4-201ENST00000523134 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
PKMP4-201ENST00000523134 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
PKMP4-201ENST00000523134 LAMC3Q9Y6N6 1575 aa21.64■■□□□ 1.05
PKMP4-201ENST00000523134 PRDM2Q13029 1718 aa21.62■■□□□ 1.05
PKMP4-201ENST00000523134 NESP48681 1621 aa21.59■■□□□ 1.05
PKMP4-201ENST00000523134 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
PKMP4-201ENST00000523134 CFTRP13569 1480 aa21.55■■□□□ 1.04
PKMP4-201ENST00000523134 KIF21AQ7Z4S6 1674 aa21.47■■□□□ 1.03
PKMP4-201ENST00000523134 PDS5BQ9NTI5 1447 aa21.39■■□□□ 1.02
PKMP4-201ENST00000523134 FANCD2Q9BXW9 1451 aa21.36■■□□□ 1.01
PKMP4-201ENST00000523134 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
PKMP4-201ENST00000523134 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
PKMP4-201ENST00000523134 THOC2Q8NI27 1593 aaKnown RBP21.27■■□□□ 1
PKMP4-201ENST00000523134 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
PKMP4-201ENST00000523134 WDR62O43379 1518 aa21.15■□□□□ 0.98
PKMP4-201ENST00000523134 URB2Q14146 1524 aaKnown RBP21.14■□□□□ 0.98
PKMP4-201ENST00000523134 ABCC8Q09428 1581 aa21.12■□□□□ 0.97
PKMP4-201ENST00000523134 DNMBPQ6XZF7 1577 aa21.12■□□□□ 0.97
PKMP4-201ENST00000523134 TOPBP1Q92547 1522 aa21.09■□□□□ 0.97
PKMP4-201ENST00000523134 CUX1P39880 1505 aa21.07■□□□□ 0.96
PKMP4-201ENST00000523134 BIVM-ERCC5R4GMW8 1640 aa21.05■□□□□ 0.96
PKMP4-201ENST00000523134 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
PKMP4-201ENST00000523134 SYNJ1O43426 1573 aa21.03■□□□□ 0.96
PKMP4-201ENST00000523134 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
PKMP4-201ENST00000523134 CUX2O14529 1486 aa21.01■□□□□ 0.95
PKMP4-201ENST00000523134 FGD5Q6ZNL6 1462 aa20.93■□□□□ 0.94
PKMP4-201ENST00000523134 POLA1P09884 1462 aaPredicted RBP20.92■□□□□ 0.94
PKMP4-201ENST00000523134 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
PKMP4-201ENST00000523134 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
PKMP4-201ENST00000523134 IFT140Q96RY7 1462 aa20.83■□□□□ 0.93
PKMP4-201ENST00000523134 RAD54L2Q9Y4B4 1467 aa20.81■□□□□ 0.92
PKMP4-201ENST00000523134 SOGA1O94964 1423 aa20.78■□□□□ 0.92
PKMP4-201ENST00000523134 ABCA10Q8WWZ4 1543 aa20.74■□□□□ 0.91
PKMP4-201ENST00000523134 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
PKMP4-201ENST00000523134 EIF4G3O43432 1585 aaKnown RBP20.72■□□□□ 0.91
PKMP4-201ENST00000523134 TRIM41Q8WV44 630 aa20.71■□□□□ 0.91
PKMP4-201ENST00000523134 ZNF608Q9ULD9 1512 aaPredicted RBP20.71■□□□□ 0.91
PKMP4-201ENST00000523134 ABCA5Q8WWZ7 1642 aa20.69■□□□□ 0.9
PKMP4-201ENST00000523134 PBRM1Q86U86 1689 aa20.66■□□□□ 0.9
PKMP4-201ENST00000523134 AQRO60306 1485 aaKnown RBP eCLIP20.62■□□□□ 0.89
PKMP4-201ENST00000523134 TDRD9Q8NDG6 1382 aaKnown RBP20.6■□□□□ 0.89
PKMP4-201ENST00000523134 GAPVD1Q14C86 1478 aa20.59■□□□□ 0.89
PKMP4-201ENST00000523134 KIF27Q86VH2 1401 aa20.55■□□□□ 0.88
PKMP4-201ENST00000523134 GRIN2BQ13224 1484 aa20.53■□□□□ 0.88
PKMP4-201ENST00000523134 ERICH3Q5RHP9 1530 aa20.51■□□□□ 0.87
PKMP4-201ENST00000523134 RUSC2Q8N2Y8 1516 aa20.5■□□□□ 0.87
PKMP4-201ENST00000523134 SNAPC4Q5SXM2 1469 aa20.48■□□□□ 0.87
PKMP4-201ENST00000523134 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
PKMP4-201ENST00000523134 MAGI1Q96QZ7 1491 aaPredicted RBP20.46■□□□□ 0.87
PKMP4-201ENST00000523134 CUL7Q14999 1698 aa20.45■□□□□ 0.86
PKMP4-201ENST00000523134 CHD1O14646 1710 aa20.44■□□□□ 0.86
PKMP4-201ENST00000523134 EEA1Q15075 1411 aa20.42■□□□□ 0.86
PKMP4-201ENST00000523134 IGF1RP08069 1367 aa20.38■□□□□ 0.85
PKMP4-201ENST00000523134 SYNJ2O15056 1496 aa20.36■□□□□ 0.85
PKMP4-201ENST00000523134 FHAD1B1AJZ9 1412 aa20.35■□□□□ 0.85
PKMP4-201ENST00000523134 CARMIL1Q5VZK9 1371 aa20.29■□□□□ 0.84
PKMP4-201ENST00000523134 GRIN2AQ12879 1464 aa20.29■□□□□ 0.84
PKMP4-201ENST00000523134 FAM9AQ8IZU1 332 aaPredicted RBP20.28■□□□□ 0.84
PKMP4-201ENST00000523134 PRXQ9BXM0 1461 aa20.26■□□□□ 0.83
PKMP4-201ENST00000523134 CSRNP3Q8WYN3 585 aa20.26■□□□□ 0.83
PKMP4-201ENST00000523134 KIF21BO75037 1637 aa20.26■□□□□ 0.83
PKMP4-201ENST00000523134 RAPGEF2Q9Y4G8 1499 aa20.24■□□□□ 0.83
PKMP4-201ENST00000523134 FBLN2P98095 1184 aa20.24■□□□□ 0.83
PKMP4-201ENST00000523134 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
PKMP4-201ENST00000523134 CEP170Q5SW79 1584 aa20.21■□□□□ 0.83
PKMP4-201ENST00000523134 CTTNBP2Q8WZ74 1663 aa20.19■□□□□ 0.82
PKMP4-201ENST00000523134 NUP160Q12769 1436 aa20.18■□□□□ 0.82
PKMP4-201ENST00000523134 CLASP1Q7Z460 1538 aa20.16■□□□□ 0.82
PKMP4-201ENST00000523134 GOLGA3Q08378 1498 aa20.11■□□□□ 0.81
PKMP4-201ENST00000523134 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms