RNA–Protein interactions for RNA: ENST00000523126.1

ITGB2-221, Transcript of integrin subunit beta 2, humanhuman

TSL 3

Gene ITGB2, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-221ENST00000523126 NISCHQ9Y2I1 1504 aa39.7■■■■□ 3.95
ITGB2-221ENST00000523126 CCDC180Q9P1Z9 1646 aa35.47■■■■□ 3.27
ITGB2-221ENST00000523126 ABCC9O60706 1549 aa35.06■■■■□ 3.2
ITGB2-221ENST00000523126 RB1CC1Q8TDY2 1594 aa33.62■■■□□ 2.97
ITGB2-221ENST00000523126 NACADO15069 1562 aa33.47■■■□□ 2.95
ITGB2-221ENST00000523126 DCAF8L2P0C7V8 631 aa33.41■■■□□ 2.94
ITGB2-221ENST00000523126 MYO15BQ96JP2 1530 aa33.11■■■□□ 2.89
ITGB2-221ENST00000523126 ZCCHC6Q5VYS8 1495 aaKnown RBP32.99■■■□□ 2.87
ITGB2-221ENST00000523126 DCAF1Q9Y4B6 1507 aa32.81■■■□□ 2.84
ITGB2-221ENST00000523126 UNC13AQ9UPW8 1703 aa32.72■■■□□ 2.83
ITGB2-221ENST00000523126 PABPN1Q86U42 306 aaKnown RBP eCLIP32.69■■■□□ 2.82
ITGB2-221ENST00000523126 BICRAQ9NZM4 1560 aa32.47■■■□□ 2.79
ITGB2-221ENST00000523126 DNAJC5BQ9UF47 199 aa32.42■■■□□ 2.78
ITGB2-221ENST00000523126 SCRIBQ14160 1630 aa32.31■■■□□ 2.76
ITGB2-221ENST00000523126 SHROOM4Q9ULL8 1493 aa32.26■■■□□ 2.75
ITGB2-221ENST00000523126 EIF4G1Q04637 1599 aaKnown RBP31.73■■■□□ 2.67
ITGB2-221ENST00000523126 CC2D2AQ9P2K1 1620 aa31.7■■■□□ 2.66
ITGB2-221ENST00000523126 CECR2Q9BXF3 1484 aa31.58■■■□□ 2.65
ITGB2-221ENST00000523126 SMARCA4P51532 1647 aa30.87■■■□□ 2.53
ITGB2-221ENST00000523126 NCAPD3P42695 1498 aa30.84■■■□□ 2.53
ITGB2-221ENST00000523126 BAZ1AQ9NRL2 1556 aaPredicted RBP30.83■■■□□ 2.53
ITGB2-221ENST00000523126 SMARCA2P51531 1590 aa30.8■■■□□ 2.52
ITGB2-221ENST00000523126 ATAD2BQ9ULI0 1458 aa30.79■■■□□ 2.52
ITGB2-221ENST00000523126 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
ITGB2-221ENST00000523126 MROH2BQ7Z745 1585 aa30.59■■■□□ 2.49
ITGB2-221ENST00000523126 BAZ1BQ9UIG0 1483 aaKnown RBP30.58■■■□□ 2.49
ITGB2-221ENST00000523126 PEG3Q9GZU2 1588 aa30.55■■■□□ 2.48
ITGB2-221ENST00000523126 ERCC6Q03468 1493 aa30.36■■■□□ 2.45
ITGB2-221ENST00000523126 WIZO95785 1651 aa30.24■■■□□ 2.43
ITGB2-221ENST00000523126 NESP48681 1621 aa30.17■■■□□ 2.42
ITGB2-221ENST00000523126 RSF1Q96T23 1441 aaPredicted RBP30.15■■■□□ 2.42
ITGB2-221ENST00000523126 CUX2O14529 1486 aa30.14■■■□□ 2.42
ITGB2-221ENST00000523126 LAMC3Q9Y6N6 1575 aa30.14■■■□□ 2.42
ITGB2-221ENST00000523126 PDS5BQ9NTI5 1447 aa29.99■■■□□ 2.39
ITGB2-221ENST00000523126 CADPSQ9ULU8 1353 aa29.95■■■□□ 2.39
ITGB2-221ENST00000523126 TOP2AP11388 1531 aaKnown RBP29.9■■■□□ 2.38
ITGB2-221ENST00000523126 KIF21AQ7Z4S6 1674 aa29.83■■■□□ 2.37
ITGB2-221ENST00000523126 THOC2Q8NI27 1593 aaKnown RBP29.83■■■□□ 2.37
ITGB2-221ENST00000523126 CFTRP13569 1480 aa29.66■■■□□ 2.34
ITGB2-221ENST00000523126 MRC2Q9UBG0 1479 aa29.66■■■□□ 2.34
ITGB2-221ENST00000523126 CEP164Q9UPV0 1460 aa29.64■■■□□ 2.34
ITGB2-221ENST00000523126 DNAJC5Q9H3Z4 198 aa29.63■■■□□ 2.33
ITGB2-221ENST00000523126 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
ITGB2-221ENST00000523126 CCDC88BA6NC98 1476 aa29.57■■■□□ 2.32
ITGB2-221ENST00000523126 WDR62O43379 1518 aa29.55■■■□□ 2.32
ITGB2-221ENST00000523126 PRDM2Q13029 1718 aa29.43■■■□□ 2.3
ITGB2-221ENST00000523126 URB2Q14146 1524 aaKnown RBP29.28■■■□□ 2.28
ITGB2-221ENST00000523126 SUPT5HO00267 1087 aaKnown RBP29.23■■■□□ 2.27
ITGB2-221ENST00000523126 ABCC8Q09428 1581 aa29.14■■■□□ 2.26
ITGB2-221ENST00000523126 TOPBP1Q92547 1522 aa29.07■■■□□ 2.24
ITGB2-221ENST00000523126 IFT140Q96RY7 1462 aa29.04■■■□□ 2.24
ITGB2-221ENST00000523126 DNMBPQ6XZF7 1577 aa29.02■■■□□ 2.24
ITGB2-221ENST00000523126 ZNF608Q9ULD9 1512 aaPredicted RBP28.84■■■□□ 2.21
ITGB2-221ENST00000523126 OSCARQ8IYS5 282 aa28.84■■■□□ 2.21
ITGB2-221ENST00000523126 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
ITGB2-221ENST00000523126 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
ITGB2-221ENST00000523126 TARBP1Q13395 1621 aaKnown RBP28.74■■■□□ 2.19
ITGB2-221ENST00000523126 CUX1P39880 1505 aa28.72■■■□□ 2.19
ITGB2-221ENST00000523126 SOGA1O94964 1423 aa28.7■■■□□ 2.19
ITGB2-221ENST00000523126 RAD54L2Q9Y4B4 1467 aa28.68■■■□□ 2.18
ITGB2-221ENST00000523126 FGD5Q6ZNL6 1462 aa28.67■■■□□ 2.18
ITGB2-221ENST00000523126 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.18
ITGB2-221ENST00000523126 WDR97A6NE52 1622 aa28.61■■■□□ 2.17
ITGB2-221ENST00000523126 TDRD9Q8NDG6 1382 aaKnown RBP28.57■■■□□ 2.16
ITGB2-221ENST00000523126 TRIM41Q8WV44 630 aa28.55■■■□□ 2.16
ITGB2-221ENST00000523126 FBLN2P98095 1184 aa28.51■■■□□ 2.15
ITGB2-221ENST00000523126 CHD1O14646 1710 aa28.46■■■□□ 2.15
ITGB2-221ENST00000523126 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
ITGB2-221ENST00000523126 GRIN2BQ13224 1484 aa28.43■■■□□ 2.14
ITGB2-221ENST00000523126 SNAPC4Q5SXM2 1469 aa28.42■■■□□ 2.14
ITGB2-221ENST00000523126 MAGI1Q96QZ7 1491 aaPredicted RBP28.4■■■□□ 2.14
ITGB2-221ENST00000523126 ABCA10Q8WWZ4 1543 aa28.38■■■□□ 2.13
ITGB2-221ENST00000523126 TOP2BQ02880 1626 aa28.37■■■□□ 2.13
ITGB2-221ENST00000523126 CHMP7Q8WUX9 453 aaPredicted RBP28.37■■■□□ 2.13
ITGB2-221ENST00000523126 GAPVD1Q14C86 1478 aa28.37■■■□□ 2.13
ITGB2-221ENST00000523126 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
ITGB2-221ENST00000523126 BIVM-ERCC5R4GMW8 1640 aa28.36■■■□□ 2.13
ITGB2-221ENST00000523126 RIMBP3CA6NJZ7 1639 aa28.34■■■□□ 2.13
ITGB2-221ENST00000523126 RIMBP3BA6NNM3 1639 aa28.34■■■□□ 2.13
ITGB2-221ENST00000523126 RIMBP3Q9UFD9 1639 aa28.34■■■□□ 2.13
ITGB2-221ENST00000523126 ARHGEF11O15085 1522 aa28.31■■■□□ 2.12
ITGB2-221ENST00000523126 PBRM1Q86U86 1689 aa28.31■■■□□ 2.12
ITGB2-221ENST00000523126 SYNJ2O15056 1496 aa28.28■■■□□ 2.12
ITGB2-221ENST00000523126 ABCA5Q8WWZ7 1642 aa28.28■■■□□ 2.12
ITGB2-221ENST00000523126 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
ITGB2-221ENST00000523126 CYB5RLQ6IPT4 315 aa28.11■■■□□ 2.09
ITGB2-221ENST00000523126 ADAMTS12P58397 1594 aa28.07■■■□□ 2.08
ITGB2-221ENST00000523126 ERICH3Q5RHP9 1530 aa28.06■■■□□ 2.08
ITGB2-221ENST00000523126 GRIN2AQ12879 1464 aa28.03■■■□□ 2.08
ITGB2-221ENST00000523126 FHAD1B1AJZ9 1412 aa28.03■■■□□ 2.08
ITGB2-221ENST00000523126 ARAP1Q96P48 1450 aa28.02■■■□□ 2.08
ITGB2-221ENST00000523126 NUP160Q12769 1436 aa27.91■■■□□ 2.06
ITGB2-221ENST00000523126 KIF27Q86VH2 1401 aa27.88■■■□□ 2.05
ITGB2-221ENST00000523126 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
ITGB2-221ENST00000523126 IGF1RP08069 1367 aa27.8■■■□□ 2.04
ITGB2-221ENST00000523126 CUL7Q14999 1698 aa27.75■■■□□ 2.03
ITGB2-221ENST00000523126 TRHP20396 242 aaPredicted RBP27.75■■■□□ 2.03
ITGB2-221ENST00000523126 SHROOM2Q13796 1616 aa27.72■■■□□ 2.03
ITGB2-221ENST00000523126 ERCC6L2Q5T890 1561 aa27.68■■■□□ 2.02
ITGB2-221ENST00000523126 JPH4Q96JJ6 628 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms