RNA–Protein interactions for RNA: ENST00000523104.5

RBPMS-218, Transcript of RNA binding protein, mRNA processing factor, humanhuman

TSL 3

Gene RBPMS, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBPMS-218ENST00000523104 NISCHQ9Y2I1 1504 aa26.1■■□□□ 1.77
RBPMS-218ENST00000523104 CCDC180Q9P1Z9 1646 aa23.5■■□□□ 1.35
RBPMS-218ENST00000523104 ABCC9O60706 1549 aa23.41■■□□□ 1.34
RBPMS-218ENST00000523104 RB1CC1Q8TDY2 1594 aa22.35■■□□□ 1.17
RBPMS-218ENST00000523104 NACADO15069 1562 aa22.21■■□□□ 1.15
RBPMS-218ENST00000523104 DCAF8L2P0C7V8 631 aa21.97■■□□□ 1.11
RBPMS-218ENST00000523104 MYO15BQ96JP2 1530 aa21.91■■□□□ 1.1
RBPMS-218ENST00000523104 DNAJC5BQ9UF47 199 aa21.91■■□□□ 1.1
RBPMS-218ENST00000523104 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
RBPMS-218ENST00000523104 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
RBPMS-218ENST00000523104 BICRAQ9NZM4 1560 aa21.64■■□□□ 1.05
RBPMS-218ENST00000523104 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.05
RBPMS-218ENST00000523104 DCAF1Q9Y4B6 1507 aa21.61■■□□□ 1.05
RBPMS-218ENST00000523104 SHROOM4Q9ULL8 1493 aa21.47■■□□□ 1.03
RBPMS-218ENST00000523104 SCRIBQ14160 1630 aa21.32■■□□□ 1
RBPMS-218ENST00000523104 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
RBPMS-218ENST00000523104 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.97
RBPMS-218ENST00000523104 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
RBPMS-218ENST00000523104 NCAPD3P42695 1498 aa20.47■□□□□ 0.87
RBPMS-218ENST00000523104 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
RBPMS-218ENST00000523104 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
RBPMS-218ENST00000523104 SMARCA4P51532 1647 aa20.37■□□□□ 0.85
RBPMS-218ENST00000523104 HMGXB3Q12766 1538 aa20.34■□□□□ 0.85
RBPMS-218ENST00000523104 BAZ1AQ9NRL2 1556 aaPredicted RBP20.29■□□□□ 0.84
RBPMS-218ENST00000523104 ERCC6Q03468 1493 aa20.27■□□□□ 0.84
RBPMS-218ENST00000523104 CUX2O14529 1486 aa20.26■□□□□ 0.83
RBPMS-218ENST00000523104 DNAJC5Q9H3Z4 198 aa20.22■□□□□ 0.83
RBPMS-218ENST00000523104 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
RBPMS-218ENST00000523104 PEG3Q9GZU2 1588 aa20.21■□□□□ 0.83
RBPMS-218ENST00000523104 NESP48681 1621 aa20.08■□□□□ 0.8
RBPMS-218ENST00000523104 MROH2BQ7Z745 1585 aa20.07■□□□□ 0.8
RBPMS-218ENST00000523104 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
RBPMS-218ENST00000523104 THOC2Q8NI27 1593 aaKnown RBP19.94■□□□□ 0.78
RBPMS-218ENST00000523104 PDS5BQ9NTI5 1447 aa19.92■□□□□ 0.78
RBPMS-218ENST00000523104 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
RBPMS-218ENST00000523104 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.77
RBPMS-218ENST00000523104 WIZO95785 1651 aa19.83■□□□□ 0.76
RBPMS-218ENST00000523104 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
RBPMS-218ENST00000523104 WDR62O43379 1518 aa19.69■□□□□ 0.74
RBPMS-218ENST00000523104 RSF1Q96T23 1441 aaPredicted RBP19.66■□□□□ 0.74
RBPMS-218ENST00000523104 CEP164Q9UPV0 1460 aa19.66■□□□□ 0.74
RBPMS-218ENST00000523104 TOP2AP11388 1531 aaKnown RBP19.63■□□□□ 0.73
RBPMS-218ENST00000523104 CFTRP13569 1480 aa19.61■□□□□ 0.73
RBPMS-218ENST00000523104 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
RBPMS-218ENST00000523104 PRDM2Q13029 1718 aa19.47■□□□□ 0.71
RBPMS-218ENST00000523104 URB2Q14146 1524 aaKnown RBP19.42■□□□□ 0.7
RBPMS-218ENST00000523104 CCDC88BA6NC98 1476 aa19.36■□□□□ 0.69
RBPMS-218ENST00000523104 OSCARQ8IYS5 282 aa19.3■□□□□ 0.68
RBPMS-218ENST00000523104 TRIM41Q8WV44 630 aa19.29■□□□□ 0.68
RBPMS-218ENST00000523104 IFT140Q96RY7 1462 aa19.27■□□□□ 0.67
RBPMS-218ENST00000523104 ABCC8Q09428 1581 aa19.26■□□□□ 0.67
RBPMS-218ENST00000523104 TOPBP1Q92547 1522 aa19.24■□□□□ 0.67
RBPMS-218ENST00000523104 DNMBPQ6XZF7 1577 aa19.19■□□□□ 0.66
RBPMS-218ENST00000523104 ZNF608Q9ULD9 1512 aaPredicted RBP19.17■□□□□ 0.66
RBPMS-218ENST00000523104 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
RBPMS-218ENST00000523104 TARBP1Q13395 1621 aaKnown RBP19.07■□□□□ 0.64
RBPMS-218ENST00000523104 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
RBPMS-218ENST00000523104 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
RBPMS-218ENST00000523104 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
RBPMS-218ENST00000523104 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
RBPMS-218ENST00000523104 AQRO60306 1485 aaKnown RBP eCLIP19■□□□□ 0.636e-7■■■□□ 15.2
RBPMS-218ENST00000523104 ARHGEF11O15085 1522 aa18.99■□□□□ 0.63
RBPMS-218ENST00000523104 CHD1O14646 1710 aa18.97■□□□□ 0.63
RBPMS-218ENST00000523104 WDR97A6NE52 1622 aa18.95■□□□□ 0.62
RBPMS-218ENST00000523104 SOGA1O94964 1423 aa18.94■□□□□ 0.62
RBPMS-218ENST00000523104 RAD54L2Q9Y4B4 1467 aa18.92■□□□□ 0.62
RBPMS-218ENST00000523104 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
RBPMS-218ENST00000523104 FBLN2P98095 1184 aa18.88■□□□□ 0.61
RBPMS-218ENST00000523104 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
RBPMS-218ENST00000523104 CUX1P39880 1505 aa18.87■□□□□ 0.61
RBPMS-218ENST00000523104 SNAPC4Q5SXM2 1469 aa18.83■□□□□ 0.6
RBPMS-218ENST00000523104 MAGI1Q96QZ7 1491 aaPredicted RBP18.83■□□□□ 0.6
RBPMS-218ENST00000523104 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
RBPMS-218ENST00000523104 GRIN2BQ13224 1484 aa18.81■□□□□ 0.6
RBPMS-218ENST00000523104 ARAP1Q96P48 1450 aa18.77■□□□□ 0.6
RBPMS-218ENST00000523104 SYNJ1O43426 1573 aa18.77■□□□□ 0.6
RBPMS-218ENST00000523104 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.6
RBPMS-218ENST00000523104 CLASP1Q7Z460 1538 aa18.75■□□□□ 0.59
RBPMS-218ENST00000523104 SYNJ2O15056 1496 aa18.75■□□□□ 0.59
RBPMS-218ENST00000523104 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
RBPMS-218ENST00000523104 PBRM1Q86U86 1689 aa18.73■□□□□ 0.59
RBPMS-218ENST00000523104 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
RBPMS-218ENST00000523104 ABCA10Q8WWZ4 1543 aa18.72■□□□□ 0.59
RBPMS-218ENST00000523104 ABCA5Q8WWZ7 1642 aa18.69■□□□□ 0.58
RBPMS-218ENST00000523104 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
RBPMS-218ENST00000523104 TRHP20396 242 aaPredicted RBP18.62■□□□□ 0.57
RBPMS-218ENST00000523104 TOP2BQ02880 1626 aa18.6■□□□□ 0.57
RBPMS-218ENST00000523104 BIVM-ERCC5R4GMW8 1640 aa18.6■□□□□ 0.57
RBPMS-218ENST00000523104 GRIN2AQ12879 1464 aa18.56■□□□□ 0.56
RBPMS-218ENST00000523104 ADAMTS12P58397 1594 aa18.55■□□□□ 0.56
RBPMS-218ENST00000523104 ERICH3Q5RHP9 1530 aa18.5■□□□□ 0.55
RBPMS-218ENST00000523104 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
RBPMS-218ENST00000523104 NUP160Q12769 1436 aa18.49■□□□□ 0.55
RBPMS-218ENST00000523104 CEP170Q5SW79 1584 aa18.47■□□□□ 0.55
RBPMS-218ENST00000523104 SHROOM2Q13796 1616 aa18.43■□□□□ 0.54
RBPMS-218ENST00000523104 ERCC6L2Q5T890 1561 aa18.39■□□□□ 0.53
RBPMS-218ENST00000523104 PRG4Q92954 1404 aaPredicted RBP18.3■□□□□ 0.52
RBPMS-218ENST00000523104 JPH4Q96JJ6 628 aa18.29■□□□□ 0.52
RBPMS-218ENST00000523104 RUSC2Q8N2Y8 1516 aa18.28■□□□□ 0.52
RBPMS-218ENST00000523104 KIF27Q86VH2 1401 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms