RNA–Protein interactions for RNA: ENST00000523034.1

CDK16-219, Transcript of cyclin dependent kinase 16, humanhuman

TSL 3

Gene CDK16, Length 454 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-219ENST00000523034 NISCHQ9Y2I1 1504 aa37.7■■■■□ 3.63
CDK16-219ENST00000523034 ABCC9O60706 1549 aa34.62■■■■□ 3.13
CDK16-219ENST00000523034 CCDC180Q9P1Z9 1646 aa33.99■■■■□ 3.03
CDK16-219ENST00000523034 DNAJC5BQ9UF47 199 aa32.93■■■□□ 2.86
CDK16-219ENST00000523034 RB1CC1Q8TDY2 1594 aa32.61■■■□□ 2.81
CDK16-219ENST00000523034 NACADO15069 1562 aa32.24■■■□□ 2.75
CDK16-219ENST00000523034 DCAF8L2P0C7V8 631 aa32.21■■■□□ 2.75
CDK16-219ENST00000523034 PABPN1Q86U42 306 aaKnown RBP eCLIP32.2■■■□□ 2.75
CDK16-219ENST00000523034 UNC13AQ9UPW8 1703 aa32■■■□□ 2.71
CDK16-219ENST00000523034 BICRAQ9NZM4 1560 aa31.74■■■□□ 2.67
CDK16-219ENST00000523034 MYO15BQ96JP2 1530 aa31.54■■■□□ 2.64
CDK16-219ENST00000523034 CC2D2AQ9P2K1 1620 aa31.2■■■□□ 2.58
CDK16-219ENST00000523034 CECR2Q9BXF3 1484 aa31.17■■■□□ 2.58
CDK16-219ENST00000523034 ZCCHC6Q5VYS8 1495 aaKnown RBP31.13■■■□□ 2.57
CDK16-219ENST00000523034 SCRIBQ14160 1630 aa31.1■■■□□ 2.57
CDK16-219ENST00000523034 SHROOM4Q9ULL8 1493 aa31.05■■■□□ 2.56
CDK16-219ENST00000523034 DCAF1Q9Y4B6 1507 aa30.99■■■□□ 2.55
CDK16-219ENST00000523034 EIF4G1Q04637 1599 aaKnown RBP30.98■■■□□ 2.55
CDK16-219ENST00000523034 DNAJC5Q9H3Z4 198 aa30.48■■■□□ 2.47
CDK16-219ENST00000523034 CUX2O14529 1486 aa29.88■■■□□ 2.37
CDK16-219ENST00000523034 ERCC6Q03468 1493 aa29.87■■■□□ 2.37
CDK16-219ENST00000523034 NCAPD3P42695 1498 aa29.77■■■□□ 2.36
CDK16-219ENST00000523034 ATAD2BQ9ULI0 1458 aa29.67■■■□□ 2.34
CDK16-219ENST00000523034 NESP48681 1621 aa29.62■■■□□ 2.33
CDK16-219ENST00000523034 SMARCA4P51532 1647 aa29.53■■■□□ 2.32
CDK16-219ENST00000523034 SMARCA2P51531 1590 aa29.52■■■□□ 2.32
CDK16-219ENST00000523034 HMGXB3Q12766 1538 aa29.5■■■□□ 2.31
CDK16-219ENST00000523034 BAZ1BQ9UIG0 1483 aaKnown RBP29.36■■■□□ 2.29
CDK16-219ENST00000523034 THOC2Q8NI27 1593 aaKnown RBP29.33■■■□□ 2.29
CDK16-219ENST00000523034 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.28
CDK16-219ENST00000523034 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
CDK16-219ENST00000523034 LAMC3Q9Y6N6 1575 aa29.19■■■□□ 2.26
CDK16-219ENST00000523034 PEG3Q9GZU2 1588 aa29.15■■■□□ 2.26
CDK16-219ENST00000523034 MROH2BQ7Z745 1585 aa29.11■■■□□ 2.25
CDK16-219ENST00000523034 TRIM41Q8WV44 630 aa29.09■■■□□ 2.25
CDK16-219ENST00000523034 PDS5BQ9NTI5 1447 aa29.03■■■□□ 2.24
CDK16-219ENST00000523034 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
CDK16-219ENST00000523034 MRC2Q9UBG0 1479 aa28.85■■■□□ 2.21
CDK16-219ENST00000523034 WIZO95785 1651 aa28.78■■■□□ 2.2
CDK16-219ENST00000523034 WDR62O43379 1518 aa28.78■■■□□ 2.2
CDK16-219ENST00000523034 CEP164Q9UPV0 1460 aa28.65■■■□□ 2.18
CDK16-219ENST00000523034 FANCD2Q9BXW9 1451 aa28.59■■■□□ 2.17
CDK16-219ENST00000523034 OSCARQ8IYS5 282 aa28.5■■■□□ 2.15
CDK16-219ENST00000523034 CFTRP13569 1480 aa28.43■■■□□ 2.14
CDK16-219ENST00000523034 URB2Q14146 1524 aaKnown RBP28.41■■■□□ 2.14
CDK16-219ENST00000523034 RSF1Q96T23 1441 aaPredicted RBP28.29■■■□□ 2.12
CDK16-219ENST00000523034 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
CDK16-219ENST00000523034 RIMBP3CA6NJZ7 1639 aa28.24■■■□□ 2.11
CDK16-219ENST00000523034 RIMBP3BA6NNM3 1639 aa28.24■■■□□ 2.11
CDK16-219ENST00000523034 RIMBP3Q9UFD9 1639 aa28.24■■■□□ 2.11
CDK16-219ENST00000523034 ZNF608Q9ULD9 1512 aaPredicted RBP28.18■■■□□ 2.1
CDK16-219ENST00000523034 PRDM2Q13029 1718 aa28.16■■■□□ 2.1
CDK16-219ENST00000523034 IFT140Q96RY7 1462 aa28.07■■■□□ 2.08
CDK16-219ENST00000523034 ARHGEF11O15085 1522 aa28.07■■■□□ 2.08
CDK16-219ENST00000523034 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
CDK16-219ENST00000523034 TOPBP1Q92547 1522 aa28■■■□□ 2.07
CDK16-219ENST00000523034 EIF4G3O43432 1585 aaKnown RBP27.95■■■□□ 2.07
CDK16-219ENST00000523034 CYB5RLQ6IPT4 315 aa27.95■■■□□ 2.06
CDK16-219ENST00000523034 CHD1O14646 1710 aa27.89■■■□□ 2.06
CDK16-219ENST00000523034 AQRO60306 1485 aaKnown RBP eCLIP27.86■■■□□ 2.059e-9■■■■■ 37.8
CDK16-219ENST00000523034 DNMBPQ6XZF7 1577 aa27.83■■■□□ 2.05
CDK16-219ENST00000523034 TRHP20396 242 aaPredicted RBP27.82■■■□□ 2.04
CDK16-219ENST00000523034 FBLN2P98095 1184 aa27.82■■■□□ 2.04
CDK16-219ENST00000523034 ABCC8Q09428 1581 aa27.8■■■□□ 2.04
CDK16-219ENST00000523034 TARBP1Q13395 1621 aaKnown RBP27.78■■■□□ 2.04
CDK16-219ENST00000523034 ARAP1Q96P48 1450 aa27.78■■■□□ 2.04
CDK16-219ENST00000523034 POLA1P09884 1462 aaPredicted RBP27.68■■■□□ 2.02
CDK16-219ENST00000523034 RAD54L2Q9Y4B4 1467 aa27.66■■■□□ 2.02
CDK16-219ENST00000523034 TDRD9Q8NDG6 1382 aaKnown RBP27.61■■■□□ 2.01
CDK16-219ENST00000523034 SOGA1O94964 1423 aa27.56■■■□□ 2
CDK16-219ENST00000523034 SNAPC4Q5SXM2 1469 aa27.53■■■□□ 2
CDK16-219ENST00000523034 CLASP1Q7Z460 1538 aa27.47■■□□□ 1.99
CDK16-219ENST00000523034 FGD5Q6ZNL6 1462 aa27.46■■□□□ 1.99
CDK16-219ENST00000523034 CHMP7Q8WUX9 453 aaPredicted RBP27.46■■□□□ 1.99
CDK16-219ENST00000523034 SYNJ1O43426 1573 aa27.4■■□□□ 1.98
CDK16-219ENST00000523034 CUX1P39880 1505 aa27.37■■□□□ 1.97
CDK16-219ENST00000523034 MAGI1Q96QZ7 1491 aaPredicted RBP27.35■■□□□ 1.97
CDK16-219ENST00000523034 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
CDK16-219ENST00000523034 GRIN2BQ13224 1484 aa27.33■■□□□ 1.97
CDK16-219ENST00000523034 AEBP2Q6ZN18 517 aaPredicted RBP27.33■■□□□ 1.97
CDK16-219ENST00000523034 SYNJ2O15056 1496 aa27.29■■□□□ 1.96
CDK16-219ENST00000523034 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
CDK16-219ENST00000523034 GAPVD1Q14C86 1478 aa27.23■■□□□ 1.95
CDK16-219ENST00000523034 ERCC6L2Q5T890 1561 aa27.13■■□□□ 1.93
CDK16-219ENST00000523034 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
CDK16-219ENST00000523034 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
CDK16-219ENST00000523034 GRIN2AQ12879 1464 aa26.99■■□□□ 1.91
CDK16-219ENST00000523034 CEP170Q5SW79 1584 aa26.97■■□□□ 1.91
CDK16-219ENST00000523034 ADAMTS12P58397 1594 aa26.93■■□□□ 1.9
CDK16-219ENST00000523034 NUP160Q12769 1436 aa26.89■■□□□ 1.89
CDK16-219ENST00000523034 WRNQ14191 1432 aaPredicted RBP eCLIP26.86■■□□□ 1.89
CDK16-219ENST00000523034 SHROOM2Q13796 1616 aa26.84■■□□□ 1.89
CDK16-219ENST00000523034 KIF13AQ9H1H9 1805 aa26.83■■□□□ 1.89
CDK16-219ENST00000523034 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
CDK16-219ENST00000523034 FHAD1B1AJZ9 1412 aa26.8■■□□□ 1.88
CDK16-219ENST00000523034 BIVM-ERCC5R4GMW8 1640 aa26.76■■□□□ 1.87
CDK16-219ENST00000523034 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
CDK16-219ENST00000523034 PRG4Q92954 1404 aaPredicted RBP26.73■■□□□ 1.87
CDK16-219ENST00000523034 ERICH3Q5RHP9 1530 aa26.69■■□□□ 1.86
CDK16-219ENST00000523034 JPH4Q96JJ6 628 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms