RNA–Protein interactions for RNA: ENST00000522950.1

PTK2-241, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4 BASIC

Gene PTK2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-241ENST00000522950 AEBP2Q6ZN18 517 aaPredicted RBP21.48■■□□□ 1.03
PTK2-241ENST00000522950 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
PTK2-241ENST00000522950 NISCHQ9Y2I1 1504 aa19.38■□□□□ 0.69
PTK2-241ENST00000522950 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
PTK2-241ENST00000522950 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
PTK2-241ENST00000522950 POTEDQ86YR6 584 aa17.32■□□□□ 0.36
PTK2-241ENST00000522950 FOXD1Q16676 465 aa17.29■□□□□ 0.36
PTK2-241ENST00000522950 CCDC180Q9P1Z9 1646 aa17.17■□□□□ 0.34
PTK2-241ENST00000522950 ABCC9O60706 1549 aa16.83■□□□□ 0.28
PTK2-241ENST00000522950 MSH5O43196 834 aa16.53■□□□□ 0.24
PTK2-241ENST00000522950 DCAF8L2P0C7V8 631 aa16.33■□□□□ 0.2
PTK2-241ENST00000522950 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
PTK2-241ENST00000522950 ZCCHC6Q5VYS8 1495 aaKnown RBP16.16■□□□□ 0.18
PTK2-241ENST00000522950 NACADO15069 1562 aa16.15■□□□□ 0.18
PTK2-241ENST00000522950 MYO15BQ96JP2 1530 aa16.03■□□□□ 0.16
PTK2-241ENST00000522950 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
PTK2-241ENST00000522950 DCAF1Q9Y4B6 1507 aa15.99■□□□□ 0.15
PTK2-241ENST00000522950 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
PTK2-241ENST00000522950 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
PTK2-241ENST00000522950 UNC13AQ9UPW8 1703 aa15.71■□□□□ 0.11
PTK2-241ENST00000522950 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
PTK2-241ENST00000522950 PPP6R1Q9UPN7 881 aa15.57■□□□□ 0.08
PTK2-241ENST00000522950 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
PTK2-241ENST00000522950 ADRA2BP18089 450 aa15.48■□□□□ 0.07
PTK2-241ENST00000522950 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
PTK2-241ENST00000522950 DNAJC5BQ9UF47 199 aa15.33■□□□□ 0.04
PTK2-241ENST00000522950 EIF4G1Q04637 1599 aaKnown RBP15.25■□□□□ 0.03
PTK2-241ENST00000522950 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
PTK2-241ENST00000522950 CECR2Q9BXF3 1484 aa15.11■□□□□ 0.01
PTK2-241ENST00000522950 BAZ1AQ9NRL2 1556 aaPredicted RBP15.03■□□□□ -0
PTK2-241ENST00000522950 SMARCA4P51532 1647 aa15.03■□□□□ -0
PTK2-241ENST00000522950 ATAD2BQ9ULI0 1458 aa14.94□□□□□ -0.02
PTK2-241ENST00000522950 SMARCA2P51531 1590 aa14.94□□□□□ -0.02
PTK2-241ENST00000522950 MROH2BQ7Z745 1585 aa14.94□□□□□ -0.02
PTK2-241ENST00000522950 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
PTK2-241ENST00000522950 BAZ1BQ9UIG0 1483 aaKnown RBP14.87□□□□□ -0.03
PTK2-241ENST00000522950 HMGXB3Q12766 1538 aa14.84□□□□□ -0.03
PTK2-241ENST00000522950 PEG3Q9GZU2 1588 aa14.83□□□□□ -0.04
PTK2-241ENST00000522950 RSF1Q96T23 1441 aaPredicted RBP14.8□□□□□ -0.04
PTK2-241ENST00000522950 WIZO95785 1651 aa14.77□□□□□ -0.04
PTK2-241ENST00000522950 TOP2AP11388 1531 aaKnown RBP14.64□□□□□ -0.07
PTK2-241ENST00000522950 SUPT5HO00267 1087 aaKnown RBP14.6□□□□□ -0.07
PTK2-241ENST00000522950 CACNB1Q02641 598 aaPredicted RBP14.6□□□□□ -0.07
PTK2-241ENST00000522950 NESP48681 1621 aa14.55□□□□□ -0.08
PTK2-241ENST00000522950 ERCC6Q03468 1493 aa14.55□□□□□ -0.08
PTK2-241ENST00000522950 DMRT2Q9Y5R5 561 aa14.54□□□□□ -0.08
PTK2-241ENST00000522950 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
PTK2-241ENST00000522950 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
PTK2-241ENST00000522950 CCDC88BA6NC98 1476 aa14.47□□□□□ -0.09
PTK2-241ENST00000522950 PDS5BQ9NTI5 1447 aa14.46□□□□□ -0.09
PTK2-241ENST00000522950 MAPK8IP2Q13387 824 aaPredicted RBP14.42□□□□□ -0.1
PTK2-241ENST00000522950 CFTRP13569 1480 aa14.4□□□□□ -0.1
PTK2-241ENST00000522950 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
PTK2-241ENST00000522950 KIF21AQ7Z4S6 1674 aa14.35□□□□□ -0.11
PTK2-241ENST00000522950 CEP164Q9UPV0 1460 aa14.34□□□□□ -0.11
PTK2-241ENST00000522950 CUX2O14529 1486 aa14.29□□□□□ -0.12
PTK2-241ENST00000522950 MRC2Q9UBG0 1479 aa14.29□□□□□ -0.12
PTK2-241ENST00000522950 THOC2Q8NI27 1593 aaKnown RBP14.28□□□□□ -0.12
PTK2-241ENST00000522950 PRDM2Q13029 1718 aa14.25□□□□□ -0.13
PTK2-241ENST00000522950 SCAF1Q9H7N4 1312 aaKnown RBP14.24□□□□□ -0.13
PTK2-241ENST00000522950 WDR62O43379 1518 aa14.2□□□□□ -0.14
PTK2-241ENST00000522950 URB2Q14146 1524 aaKnown RBP14.18□□□□□ -0.14
PTK2-241ENST00000522950 ABCC8Q09428 1581 aa14.12□□□□□ -0.15
PTK2-241ENST00000522950 TOPBP1Q92547 1522 aa14.11□□□□□ -0.15
PTK2-241ENST00000522950 DNMBPQ6XZF7 1577 aa14.09□□□□□ -0.15
PTK2-241ENST00000522950 CUX1P39880 1505 aa14.02□□□□□ -0.16
PTK2-241ENST00000522950 IFT140Q96RY7 1462 aa14.02□□□□□ -0.16
PTK2-241ENST00000522950 RNF39Q9H2S5 420 aa14□□□□□ -0.17
PTK2-241ENST00000522950 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
PTK2-241ENST00000522950 WRNQ14191 1432 aaPredicted RBP eCLIP13.99□□□□□ -0.17
PTK2-241ENST00000522950 FGD5Q6ZNL6 1462 aa13.99□□□□□ -0.17
PTK2-241ENST00000522950 SOGA1O94964 1423 aa13.97□□□□□ -0.17
PTK2-241ENST00000522950 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.17
PTK2-241ENST00000522950 RAD54L2Q9Y4B4 1467 aa13.95□□□□□ -0.18
PTK2-241ENST00000522950 ZNF608Q9ULD9 1512 aaPredicted RBP13.94□□□□□ -0.18
PTK2-241ENST00000522950 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
PTK2-241ENST00000522950 TARBP1Q13395 1621 aaKnown RBP13.91□□□□□ -0.18
PTK2-241ENST00000522950 TOP2BQ02880 1626 aa13.9□□□□□ -0.18
PTK2-241ENST00000522950 AQRO60306 1485 aaKnown RBP eCLIP13.89□□□□□ -0.19
PTK2-241ENST00000522950 TDRD9Q8NDG6 1382 aaKnown RBP13.89□□□□□ -0.19
PTK2-241ENST00000522950 EIF4G3O43432 1585 aaKnown RBP13.88□□□□□ -0.19
PTK2-241ENST00000522950 BIVM-ERCC5R4GMW8 1640 aa13.88□□□□□ -0.19
PTK2-241ENST00000522950 ABCA10Q8WWZ4 1543 aa13.83□□□□□ -0.2
PTK2-241ENST00000522950 FBLN2P98095 1184 aa13.81□□□□□ -0.2
PTK2-241ENST00000522950 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
PTK2-241ENST00000522950 GAPVD1Q14C86 1478 aa13.8□□□□□ -0.2
PTK2-241ENST00000522950 GRIN2BQ13224 1484 aa13.79□□□□□ -0.2
PTK2-241ENST00000522950 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
PTK2-241ENST00000522950 SNAPC4Q5SXM2 1469 aa13.77□□□□□ -0.21
PTK2-241ENST00000522950 TRIM41Q8WV44 630 aa13.77□□□□□ -0.21
PTK2-241ENST00000522950 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
PTK2-241ENST00000522950 OSCARQ8IYS5 282 aa13.75□□□□□ -0.21
PTK2-241ENST00000522950 ABCA5Q8WWZ7 1642 aa13.75□□□□□ -0.21
PTK2-241ENST00000522950 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
PTK2-241ENST00000522950 MAGI1Q96QZ7 1491 aaPredicted RBP13.74□□□□□ -0.21
PTK2-241ENST00000522950 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
PTK2-241ENST00000522950 PBRM1Q86U86 1689 aa13.72□□□□□ -0.21
PTK2-241ENST00000522950 KIF27Q86VH2 1401 aa13.71□□□□□ -0.22
PTK2-241ENST00000522950 SYNJ2O15056 1496 aa13.68□□□□□ -0.22
PTK2-241ENST00000522950 CHD1O14646 1710 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms