RNA–Protein interactions for RNA: ENST00000522902.1

HAVCR2-205, Transcript of hepatitis A virus cellular receptor 2, humanhuman

TSL 1 (best)

Gene HAVCR2, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HAVCR2-205ENST00000522902 NISCHQ9Y2I1 1504 aa27.99■■■□□ 2.07
HAVCR2-205ENST00000522902 ABCC9O60706 1549 aa25.2■■□□□ 1.62
HAVCR2-205ENST00000522902 CCDC180Q9P1Z9 1646 aa25.17■■□□□ 1.62
HAVCR2-205ENST00000522902 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.42
HAVCR2-205ENST00000522902 NACADO15069 1562 aa23.75■■□□□ 1.39
HAVCR2-205ENST00000522902 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
HAVCR2-205ENST00000522902 DCAF8L2P0C7V8 631 aa23.54■■□□□ 1.36
HAVCR2-205ENST00000522902 UNC13AQ9UPW8 1703 aa23.47■■□□□ 1.35
HAVCR2-205ENST00000522902 PABPN1Q86U42 306 aaKnown RBP eCLIP23.4■■□□□ 1.34
HAVCR2-205ENST00000522902 MYO15BQ96JP2 1530 aa23.39■■□□□ 1.34
HAVCR2-205ENST00000522902 BICRAQ9NZM4 1560 aa23.3■■□□□ 1.32
HAVCR2-205ENST00000522902 ZCCHC6Q5VYS8 1495 aaKnown RBP23.24■■□□□ 1.31
HAVCR2-205ENST00000522902 DCAF1Q9Y4B6 1507 aa23.1■■□□□ 1.29
HAVCR2-205ENST00000522902 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
HAVCR2-205ENST00000522902 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
HAVCR2-205ENST00000522902 CC2D2AQ9P2K1 1620 aa22.76■■□□□ 1.23
HAVCR2-205ENST00000522902 EIF4G1Q04637 1599 aaKnown RBP22.71■■□□□ 1.23
HAVCR2-205ENST00000522902 CECR2Q9BXF3 1484 aa22.67■■□□□ 1.22
HAVCR2-205ENST00000522902 NCAPD3P42695 1498 aa21.9■■□□□ 1.1
HAVCR2-205ENST00000522902 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
HAVCR2-205ENST00000522902 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
HAVCR2-205ENST00000522902 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
HAVCR2-205ENST00000522902 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
HAVCR2-205ENST00000522902 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
HAVCR2-205ENST00000522902 ERCC6Q03468 1493 aa21.73■■□□□ 1.07
HAVCR2-205ENST00000522902 CUX2O14529 1486 aa21.7■■□□□ 1.06
HAVCR2-205ENST00000522902 BAZ1BQ9UIG0 1483 aaKnown RBP21.67■■□□□ 1.06
HAVCR2-205ENST00000522902 NESP48681 1621 aa21.66■■□□□ 1.06
HAVCR2-205ENST00000522902 DNAJC5Q9H3Z4 198 aa21.64■■□□□ 1.05
HAVCR2-205ENST00000522902 PEG3Q9GZU2 1588 aa21.64■■□□□ 1.05
HAVCR2-205ENST00000522902 MROH2BQ7Z745 1585 aa21.61■■□□□ 1.05
HAVCR2-205ENST00000522902 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
HAVCR2-205ENST00000522902 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
HAVCR2-205ENST00000522902 KIF21AQ7Z4S6 1674 aa21.39■■□□□ 1.01
HAVCR2-205ENST00000522902 WIZO95785 1651 aa21.35■■□□□ 1.01
HAVCR2-205ENST00000522902 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
HAVCR2-205ENST00000522902 CADPSQ9ULU8 1353 aa21.23■□□□□ 0.99
HAVCR2-205ENST00000522902 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
HAVCR2-205ENST00000522902 WDR62O43379 1518 aa21.14■□□□□ 0.97
HAVCR2-205ENST00000522902 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
HAVCR2-205ENST00000522902 TOP2AP11388 1531 aaKnown RBP21.08■□□□□ 0.96
HAVCR2-205ENST00000522902 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
HAVCR2-205ENST00000522902 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
HAVCR2-205ENST00000522902 CFTRP13569 1480 aa21.01■□□□□ 0.95
HAVCR2-205ENST00000522902 URB2Q14146 1524 aaKnown RBP20.9■□□□□ 0.94
HAVCR2-205ENST00000522902 PRDM2Q13029 1718 aa20.86■□□□□ 0.93
HAVCR2-205ENST00000522902 CCDC88BA6NC98 1476 aa20.79■□□□□ 0.92
HAVCR2-205ENST00000522902 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
HAVCR2-205ENST00000522902 TOPBP1Q92547 1522 aa20.65■□□□□ 0.9
HAVCR2-205ENST00000522902 ZNF608Q9ULD9 1512 aaPredicted RBP20.65■□□□□ 0.9
HAVCR2-205ENST00000522902 IFT140Q96RY7 1462 aa20.63■□□□□ 0.89
HAVCR2-205ENST00000522902 OSCARQ8IYS5 282 aa20.59■□□□□ 0.89
HAVCR2-205ENST00000522902 DNMBPQ6XZF7 1577 aa20.59■□□□□ 0.89
HAVCR2-205ENST00000522902 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
HAVCR2-205ENST00000522902 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
HAVCR2-205ENST00000522902 TARBP1Q13395 1621 aaKnown RBP20.49■□□□□ 0.87
HAVCR2-205ENST00000522902 RIMBP3CA6NJZ7 1639 aa20.49■□□□□ 0.87
HAVCR2-205ENST00000522902 RIMBP3BA6NNM3 1639 aa20.49■□□□□ 0.87
HAVCR2-205ENST00000522902 RIMBP3Q9UFD9 1639 aa20.49■□□□□ 0.87
HAVCR2-205ENST00000522902 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
HAVCR2-205ENST00000522902 AQRO60306 1485 aaKnown RBP eCLIP20.42■□□□□ 0.86
HAVCR2-205ENST00000522902 CHD1O14646 1710 aa20.41■□□□□ 0.86
HAVCR2-205ENST00000522902 ARHGEF11O15085 1522 aa20.41■□□□□ 0.86
HAVCR2-205ENST00000522902 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
HAVCR2-205ENST00000522902 FGD5Q6ZNL6 1462 aa20.32■□□□□ 0.84
HAVCR2-205ENST00000522902 CUX1P39880 1505 aa20.31■□□□□ 0.84
HAVCR2-205ENST00000522902 SOGA1O94964 1423 aa20.28■□□□□ 0.84
HAVCR2-205ENST00000522902 TDRD9Q8NDG6 1382 aaKnown RBP20.28■□□□□ 0.84
HAVCR2-205ENST00000522902 SNAPC4Q5SXM2 1469 aa20.25■□□□□ 0.83
HAVCR2-205ENST00000522902 WDR97A6NE52 1622 aa20.24■□□□□ 0.83
HAVCR2-205ENST00000522902 FBLN2P98095 1184 aa20.23■□□□□ 0.83
HAVCR2-205ENST00000522902 ARAP1Q96P48 1450 aa20.23■□□□□ 0.83
HAVCR2-205ENST00000522902 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
HAVCR2-205ENST00000522902 CYB5RLQ6IPT4 315 aa20.15■□□□□ 0.82
HAVCR2-205ENST00000522902 GRIN2BQ13224 1484 aa20.15■□□□□ 0.82
HAVCR2-205ENST00000522902 MAGI1Q96QZ7 1491 aaPredicted RBP20.15■□□□□ 0.82
HAVCR2-205ENST00000522902 PBRM1Q86U86 1689 aa20.13■□□□□ 0.81
HAVCR2-205ENST00000522902 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
HAVCR2-205ENST00000522902 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
HAVCR2-205ENST00000522902 SYNJ2O15056 1496 aa20.09■□□□□ 0.81
HAVCR2-205ENST00000522902 ABCA5Q8WWZ7 1642 aa20.09■□□□□ 0.81
HAVCR2-205ENST00000522902 GAPVD1Q14C86 1478 aa20.07■□□□□ 0.8
HAVCR2-205ENST00000522902 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
HAVCR2-205ENST00000522902 CHMP7Q8WUX9 453 aaPredicted RBP20.06■□□□□ 0.8
HAVCR2-205ENST00000522902 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
HAVCR2-205ENST00000522902 ADAMTS12P58397 1594 aa19.95■□□□□ 0.78
HAVCR2-205ENST00000522902 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
HAVCR2-205ENST00000522902 TRHP20396 242 aaPredicted RBP19.94■□□□□ 0.78
HAVCR2-205ENST00000522902 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
HAVCR2-205ENST00000522902 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
HAVCR2-205ENST00000522902 CEP170Q5SW79 1584 aa19.88■□□□□ 0.77
HAVCR2-205ENST00000522902 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
HAVCR2-205ENST00000522902 NUP160Q12769 1436 aa19.84■□□□□ 0.77
HAVCR2-205ENST00000522902 FHAD1B1AJZ9 1412 aa19.8■□□□□ 0.76
HAVCR2-205ENST00000522902 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
HAVCR2-205ENST00000522902 SHROOM2Q13796 1616 aa19.78■□□□□ 0.76
HAVCR2-205ENST00000522902 RUSC2Q8N2Y8 1516 aa19.68■□□□□ 0.74
HAVCR2-205ENST00000522902 PRG4Q92954 1404 aaPredicted RBP19.62■□□□□ 0.73
HAVCR2-205ENST00000522902 JPH4Q96JJ6 628 aa19.54■□□□□ 0.72
HAVCR2-205ENST00000522902 KIF13AQ9H1H9 1805 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms