RNA–Protein interactions for RNA: ENST00000522868.5

GABRP-210, Transcript of gamma-aminobutyric acid type A receptor pi subunit, humanhuman

TSL 5

Gene GABRP, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRP-210ENST00000522868 NISCHQ9Y2I1 1504 aa19.1■□□□□ 0.65
GABRP-210ENST00000522868 ABCC9O60706 1549 aa17.6■□□□□ 0.41
GABRP-210ENST00000522868 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
GABRP-210ENST00000522868 CCDC180Q9P1Z9 1646 aa16.95■□□□□ 0.3
GABRP-210ENST00000522868 DNAJC5Q9H3Z4 198 aa16.38■□□□□ 0.21
GABRP-210ENST00000522868 PABPN1Q86U42 306 aaKnown RBP eCLIP16.37■□□□□ 0.21
GABRP-210ENST00000522868 RB1CC1Q8TDY2 1594 aa16.24■□□□□ 0.19
GABRP-210ENST00000522868 DCAF8L2P0C7V8 631 aa16.08■□□□□ 0.16
GABRP-210ENST00000522868 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
GABRP-210ENST00000522868 NACADO15069 1562 aa15.9■□□□□ 0.14
GABRP-210ENST00000522868 CECR2Q9BXF3 1484 aa15.88■□□□□ 0.13
GABRP-210ENST00000522868 UNC13AQ9UPW8 1703 aa15.85■□□□□ 0.13
GABRP-210ENST00000522868 BICRAQ9NZM4 1560 aa15.8■□□□□ 0.12
GABRP-210ENST00000522868 CC2D2AQ9P2K1 1620 aa15.75■□□□□ 0.11
GABRP-210ENST00000522868 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
GABRP-210ENST00000522868 MYO15BQ96JP2 1530 aa15.7■□□□□ 0.1
GABRP-210ENST00000522868 SCRIBQ14160 1630 aa15.58■□□□□ 0.09
GABRP-210ENST00000522868 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
GABRP-210ENST00000522868 EIF4G1Q04637 1599 aaKnown RBP15.49■□□□□ 0.07
GABRP-210ENST00000522868 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.05
GABRP-210ENST00000522868 CUX2O14529 1486 aa15.33■□□□□ 0.04
GABRP-210ENST00000522868 ERCC6Q03468 1493 aa15.23■□□□□ 0.03
GABRP-210ENST00000522868 CHIC1Q5VXU3 224 aa15.18■□□□□ 0.02
GABRP-210ENST00000522868 NESP48681 1621 aa14.88□□□□□ -0.03
GABRP-210ENST00000522868 SMARCA4P51532 1647 aa14.85□□□□□ -0.03
GABRP-210ENST00000522868 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
GABRP-210ENST00000522868 AEBP2Q6ZN18 517 aaPredicted RBP14.79□□□□□ -0.04
GABRP-210ENST00000522868 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.04
GABRP-210ENST00000522868 THOC2Q8NI27 1593 aaKnown RBP14.73□□□□□ -0.05
GABRP-210ENST00000522868 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
GABRP-210ENST00000522868 SMARCA2P51531 1590 aa14.71□□□□□ -0.05
GABRP-210ENST00000522868 WIZO95785 1651 aa14.71□□□□□ -0.06
GABRP-210ENST00000522868 ATAD2BQ9ULI0 1458 aa14.68□□□□□ -0.06
GABRP-210ENST00000522868 OSCARQ8IYS5 282 aa14.67□□□□□ -0.06
GABRP-210ENST00000522868 PEG3Q9GZU2 1588 aa14.64□□□□□ -0.07
GABRP-210ENST00000522868 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
GABRP-210ENST00000522868 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
GABRP-210ENST00000522868 HMGXB3Q12766 1538 aa14.57□□□□□ -0.08
GABRP-210ENST00000522868 KIF21AQ7Z4S6 1674 aa14.56□□□□□ -0.08
GABRP-210ENST00000522868 BAZ1BQ9UIG0 1483 aaKnown RBP14.56□□□□□ -0.08
GABRP-210ENST00000522868 PDS5BQ9NTI5 1447 aa14.51□□□□□ -0.09
GABRP-210ENST00000522868 LAMC3Q9Y6N6 1575 aa14.48□□□□□ -0.09
GABRP-210ENST00000522868 SLC24A1O60721 1099 aa14.48□□□□□ -0.09
GABRP-210ENST00000522868 CYB5RLQ6IPT4 315 aa14.47□□□□□ -0.09
GABRP-210ENST00000522868 RIMBP3CA6NJZ7 1639 aa14.46□□□□□ -0.09
GABRP-210ENST00000522868 RIMBP3BA6NNM3 1639 aa14.46□□□□□ -0.09
GABRP-210ENST00000522868 RIMBP3Q9UFD9 1639 aa14.46□□□□□ -0.09
GABRP-210ENST00000522868 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
GABRP-210ENST00000522868 MRC2Q9UBG0 1479 aa14.42□□□□□ -0.1
GABRP-210ENST00000522868 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
GABRP-210ENST00000522868 WDR62O43379 1518 aa14.35□□□□□ -0.11
GABRP-210ENST00000522868 ARHGEF11O15085 1522 aa14.33□□□□□ -0.12
GABRP-210ENST00000522868 CADPSQ9ULU8 1353 aa14.3□□□□□ -0.12
GABRP-210ENST00000522868 CCDC88BA6NC98 1476 aa14.28□□□□□ -0.12
GABRP-210ENST00000522868 ILDR1Q86SU0 546 aaPredicted RBP14.23□□□□□ -0.13
GABRP-210ENST00000522868 CEP164Q9UPV0 1460 aa14.21□□□□□ -0.13
GABRP-210ENST00000522868 PRDM2Q13029 1718 aa14.19□□□□□ -0.14
GABRP-210ENST00000522868 ARAP1Q96P48 1450 aa14.15□□□□□ -0.14
GABRP-210ENST00000522868 FANCD2Q9BXW9 1451 aa14.15□□□□□ -0.14
GABRP-210ENST00000522868 CFTRP13569 1480 aa14.14□□□□□ -0.15
GABRP-210ENST00000522868 FBLN2P98095 1184 aa14.1□□□□□ -0.15
GABRP-210ENST00000522868 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.16
GABRP-210ENST00000522868 URB2Q14146 1524 aaKnown RBP14.07□□□□□ -0.16
GABRP-210ENST00000522868 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
GABRP-210ENST00000522868 CHD1O14646 1710 aa13.93□□□□□ -0.18
GABRP-210ENST00000522868 ABCC8Q09428 1581 aa13.92□□□□□ -0.18
GABRP-210ENST00000522868 AQRO60306 1485 aaKnown RBP eCLIP13.89□□□□□ -0.19
GABRP-210ENST00000522868 TOPBP1Q92547 1522 aa13.89□□□□□ -0.19
GABRP-210ENST00000522868 CUX1P39880 1505 aa13.87□□□□□ -0.19
GABRP-210ENST00000522868 EIF4G3O43432 1585 aaKnown RBP13.87□□□□□ -0.19
GABRP-210ENST00000522868 DNMBPQ6XZF7 1577 aa13.87□□□□□ -0.19
GABRP-210ENST00000522868 SYNJ1O43426 1573 aa13.83□□□□□ -0.19
GABRP-210ENST00000522868 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
GABRP-210ENST00000522868 KDM4FA0A1W2PPD8 638 aa13.78□□□□□ -0.2
GABRP-210ENST00000522868 POLA1P09884 1462 aaPredicted RBP13.78□□□□□ -0.2
GABRP-210ENST00000522868 FGD5Q6ZNL6 1462 aa13.78□□□□□ -0.2
GABRP-210ENST00000522868 CHMP7Q8WUX9 453 aaPredicted RBP13.77□□□□□ -0.21
GABRP-210ENST00000522868 TARBP1Q13395 1621 aaKnown RBP13.76□□□□□ -0.21
GABRP-210ENST00000522868 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
GABRP-210ENST00000522868 WDR97A6NE52 1622 aa13.75□□□□□ -0.21
GABRP-210ENST00000522868 TOP2BQ02880 1626 aa13.75□□□□□ -0.21
GABRP-210ENST00000522868 WRNQ14191 1432 aaPredicted RBP eCLIP13.74□□□□□ -0.21
GABRP-210ENST00000522868 GAPVD1Q14C86 1478 aa13.72□□□□□ -0.21
GABRP-210ENST00000522868 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.22
GABRP-210ENST00000522868 CLASP1Q7Z460 1538 aa13.7□□□□□ -0.22
GABRP-210ENST00000522868 SOGA1O94964 1423 aa13.66□□□□□ -0.22
GABRP-210ENST00000522868 SNAPC4Q5SXM2 1469 aa13.66□□□□□ -0.22
GABRP-210ENST00000522868 PBRM1Q86U86 1689 aa13.63□□□□□ -0.23
GABRP-210ENST00000522868 MYT1Q01538 1121 aa13.62□□□□□ -0.23
GABRP-210ENST00000522868 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
GABRP-210ENST00000522868 ABCA10Q8WWZ4 1543 aa13.59□□□□□ -0.23
GABRP-210ENST00000522868 FAM69CQ0P6D2 419 aa13.59□□□□□ -0.23
GABRP-210ENST00000522868 ERCC6L2Q5T890 1561 aa13.55□□□□□ -0.24
GABRP-210ENST00000522868 KIF13AQ9H1H9 1805 aa13.55□□□□□ -0.24
GABRP-210ENST00000522868 FBXO41Q8TF61 875 aa13.53□□□□□ -0.24
GABRP-210ENST00000522868 TTBK1Q5TCY1 1321 aaPredicted RBP13.53□□□□□ -0.24
GABRP-210ENST00000522868 RUSC2Q8N2Y8 1516 aa13.51□□□□□ -0.25
GABRP-210ENST00000522868 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
GABRP-210ENST00000522868 MAGI1Q96QZ7 1491 aaPredicted RBP13.51□□□□□ -0.25
GABRP-210ENST00000522868 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms