RNA–Protein interactions for RNA: ENST00000522804.5

RMDN1-215, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 3

Gene RMDN1, Length 968 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-215ENST00000522804 NISCHQ9Y2I1 1504 aa37.42■■■■□ 3.58
RMDN1-215ENST00000522804 CCDC180Q9P1Z9 1646 aa33.4■■■□□ 2.94
RMDN1-215ENST00000522804 ABCC9O60706 1549 aa32.72■■■□□ 2.83
RMDN1-215ENST00000522804 RB1CC1Q8TDY2 1594 aa31.46■■■□□ 2.63
RMDN1-215ENST00000522804 DCAF8L2P0C7V8 631 aa31.37■■■□□ 2.61
RMDN1-215ENST00000522804 NACADO15069 1562 aa31.35■■■□□ 2.61
RMDN1-215ENST00000522804 ZCCHC6Q5VYS8 1495 aaKnown RBP31.17■■■□□ 2.58
RMDN1-215ENST00000522804 MYO15BQ96JP2 1530 aa31.06■■■□□ 2.56
RMDN1-215ENST00000522804 DCAF1Q9Y4B6 1507 aa30.92■■■□□ 2.54
RMDN1-215ENST00000522804 UNC13AQ9UPW8 1703 aa30.81■■■□□ 2.52
RMDN1-215ENST00000522804 PABPN1Q86U42 306 aaKnown RBP eCLIP30.52■■■□□ 2.48
RMDN1-215ENST00000522804 SCRIBQ14160 1630 aa30.51■■■□□ 2.47
RMDN1-215ENST00000522804 BICRAQ9NZM4 1560 aa30.44■■■□□ 2.46
RMDN1-215ENST00000522804 SHROOM4Q9ULL8 1493 aa30.11■■■□□ 2.41
RMDN1-215ENST00000522804 DNAJC5BQ9UF47 199 aa29.95■■■□□ 2.39
RMDN1-215ENST00000522804 EIF4G1Q04637 1599 aaKnown RBP29.69■■■□□ 2.34
RMDN1-215ENST00000522804 CC2D2AQ9P2K1 1620 aa29.6■■■□□ 2.33
RMDN1-215ENST00000522804 CECR2Q9BXF3 1484 aa29.39■■■□□ 2.3
RMDN1-215ENST00000522804 SMARCA4P51532 1647 aa29.12■■■□□ 2.25
RMDN1-215ENST00000522804 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
RMDN1-215ENST00000522804 SMARCA2P51531 1590 aa28.93■■■□□ 2.22
RMDN1-215ENST00000522804 ATAD2BQ9ULI0 1458 aa28.9■■■□□ 2.22
RMDN1-215ENST00000522804 NCAPD3P42695 1498 aa28.85■■■□□ 2.21
RMDN1-215ENST00000522804 MROH2BQ7Z745 1585 aa28.85■■■□□ 2.21
RMDN1-215ENST00000522804 HMGXB3Q12766 1538 aa28.79■■■□□ 2.2
RMDN1-215ENST00000522804 PEG3Q9GZU2 1588 aa28.76■■■□□ 2.19
RMDN1-215ENST00000522804 BAZ1BQ9UIG0 1483 aaKnown RBP28.73■■■□□ 2.19
RMDN1-215ENST00000522804 WIZO95785 1651 aa28.61■■■□□ 2.17
RMDN1-215ENST00000522804 RSF1Q96T23 1441 aaPredicted RBP28.45■■■□□ 2.15
RMDN1-215ENST00000522804 NESP48681 1621 aa28.28■■■□□ 2.12
RMDN1-215ENST00000522804 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
RMDN1-215ENST00000522804 ERCC6Q03468 1493 aa28.26■■■□□ 2.11
RMDN1-215ENST00000522804 LAMC3Q9Y6N6 1575 aa28.21■■■□□ 2.11
RMDN1-215ENST00000522804 KIF21AQ7Z4S6 1674 aa28.04■■■□□ 2.08
RMDN1-215ENST00000522804 CADPSQ9ULU8 1353 aa28.03■■■□□ 2.08
RMDN1-215ENST00000522804 PDS5BQ9NTI5 1447 aa27.99■■■□□ 2.07
RMDN1-215ENST00000522804 CUX2O14529 1486 aa27.91■■■□□ 2.06
RMDN1-215ENST00000522804 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
RMDN1-215ENST00000522804 CCDC88BA6NC98 1476 aa27.89■■■□□ 2.05
RMDN1-215ENST00000522804 CFTRP13569 1480 aa27.85■■■□□ 2.05
RMDN1-215ENST00000522804 PRDM2Q13029 1718 aa27.84■■■□□ 2.05
RMDN1-215ENST00000522804 CEP164Q9UPV0 1460 aa27.78■■■□□ 2.04
RMDN1-215ENST00000522804 FANCD2Q9BXW9 1451 aa27.77■■■□□ 2.04
RMDN1-215ENST00000522804 SUPT5HO00267 1087 aaKnown RBP27.77■■■□□ 2.04
RMDN1-215ENST00000522804 MRC2Q9UBG0 1479 aa27.74■■■□□ 2.03
RMDN1-215ENST00000522804 WDR62O43379 1518 aa27.64■■■□□ 2.02
RMDN1-215ENST00000522804 URB2Q14146 1524 aaKnown RBP27.49■■□□□ 1.99
RMDN1-215ENST00000522804 TOPBP1Q92547 1522 aa27.32■■□□□ 1.96
RMDN1-215ENST00000522804 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
RMDN1-215ENST00000522804 ABCC8Q09428 1581 aa27.3■■□□□ 1.96
RMDN1-215ENST00000522804 IFT140Q96RY7 1462 aa27.17■■□□□ 1.94
RMDN1-215ENST00000522804 CUX1P39880 1505 aa27.09■■□□□ 1.93
RMDN1-215ENST00000522804 POLA1P09884 1462 aaPredicted RBP27.07■■□□□ 1.92
RMDN1-215ENST00000522804 DNAJC5Q9H3Z4 198 aa27.05■■□□□ 1.92
RMDN1-215ENST00000522804 ZNF608Q9ULD9 1512 aaPredicted RBP27.04■■□□□ 1.92
RMDN1-215ENST00000522804 TARBP1Q13395 1621 aaKnown RBP27.03■■□□□ 1.92
RMDN1-215ENST00000522804 FGD5Q6ZNL6 1462 aa27.03■■□□□ 1.92
RMDN1-215ENST00000522804 EIF4G3O43432 1585 aaKnown RBP27.01■■□□□ 1.92
RMDN1-215ENST00000522804 RAD54L2Q9Y4B4 1467 aa26.96■■□□□ 1.91
RMDN1-215ENST00000522804 SOGA1O94964 1423 aa26.95■■□□□ 1.9
RMDN1-215ENST00000522804 WRNQ14191 1432 aaPredicted RBP eCLIP26.89■■□□□ 1.89
RMDN1-215ENST00000522804 BIVM-ERCC5R4GMW8 1640 aa26.88■■□□□ 1.89
RMDN1-215ENST00000522804 AQRO60306 1485 aaKnown RBP eCLIP26.87■■□□□ 1.89
RMDN1-215ENST00000522804 WDR97A6NE52 1622 aa26.86■■□□□ 1.89
RMDN1-215ENST00000522804 TOP2BQ02880 1626 aa26.86■■□□□ 1.89
RMDN1-215ENST00000522804 SYNJ1O43426 1573 aa26.85■■□□□ 1.89
RMDN1-215ENST00000522804 TDRD9Q8NDG6 1382 aaKnown RBP26.81■■□□□ 1.88
RMDN1-215ENST00000522804 CHD1O14646 1710 aa26.74■■□□□ 1.87
RMDN1-215ENST00000522804 PBRM1Q86U86 1689 aa26.73■■□□□ 1.87
RMDN1-215ENST00000522804 ABCA10Q8WWZ4 1543 aa26.72■■□□□ 1.87
RMDN1-215ENST00000522804 OSCARQ8IYS5 282 aa26.7■■□□□ 1.86
RMDN1-215ENST00000522804 ABCA5Q8WWZ7 1642 aa26.68■■□□□ 1.86
RMDN1-215ENST00000522804 SNAPC4Q5SXM2 1469 aa26.68■■□□□ 1.86
RMDN1-215ENST00000522804 GRIN2BQ13224 1484 aa26.67■■□□□ 1.86
RMDN1-215ENST00000522804 GAPVD1Q14C86 1478 aa26.66■■□□□ 1.86
RMDN1-215ENST00000522804 FBLN2P98095 1184 aa26.63■■□□□ 1.85
RMDN1-215ENST00000522804 MAGI1Q96QZ7 1491 aaPredicted RBP26.61■■□□□ 1.85
RMDN1-215ENST00000522804 SYNJ2O15056 1496 aa26.5■■□□□ 1.83
RMDN1-215ENST00000522804 CHMP7Q8WUX9 453 aaPredicted RBP26.5■■□□□ 1.83
RMDN1-215ENST00000522804 ADAMTS12P58397 1594 aa26.45■■□□□ 1.82
RMDN1-215ENST00000522804 ERICH3Q5RHP9 1530 aa26.42■■□□□ 1.82
RMDN1-215ENST00000522804 RIMBP3CA6NJZ7 1639 aa26.39■■□□□ 1.81
RMDN1-215ENST00000522804 RIMBP3BA6NNM3 1639 aa26.39■■□□□ 1.81
RMDN1-215ENST00000522804 RIMBP3Q9UFD9 1639 aa26.39■■□□□ 1.81
RMDN1-215ENST00000522804 FHAD1B1AJZ9 1412 aa26.33■■□□□ 1.81
RMDN1-215ENST00000522804 KIF27Q86VH2 1401 aa26.33■■□□□ 1.81
RMDN1-215ENST00000522804 GRIN2AQ12879 1464 aa26.33■■□□□ 1.81
RMDN1-215ENST00000522804 ARHGEF11O15085 1522 aa26.33■■□□□ 1.81
RMDN1-215ENST00000522804 CLASP1Q7Z460 1538 aa26.33■■□□□ 1.81
RMDN1-215ENST00000522804 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
RMDN1-215ENST00000522804 CUL7Q14999 1698 aa26.24■■□□□ 1.79
RMDN1-215ENST00000522804 CEP170Q5SW79 1584 aa26.23■■□□□ 1.79
RMDN1-215ENST00000522804 NUP160Q12769 1436 aa26.17■■□□□ 1.78
RMDN1-215ENST00000522804 IGF1RP08069 1367 aa26.14■■□□□ 1.78
RMDN1-215ENST00000522804 ARAP1Q96P48 1450 aa26.1■■□□□ 1.77
RMDN1-215ENST00000522804 RUSC2Q8N2Y8 1516 aa26.06■■□□□ 1.76
RMDN1-215ENST00000522804 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
RMDN1-215ENST00000522804 CARMIL1Q5VZK9 1371 aa26.05■■□□□ 1.76
RMDN1-215ENST00000522804 SHROOM2Q13796 1616 aa26.03■■□□□ 1.76
RMDN1-215ENST00000522804 ERCC6L2Q5T890 1561 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms