RNA–Protein interactions for RNA: ENST00000522729.5

NECAB1-204, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

TSL 2

Gene NECAB1, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-204ENST00000522729 NISCHQ9Y2I1 1504 aa40.47■■■■■ 4.07
NECAB1-204ENST00000522729 ABCC9O60706 1549 aa37.15■■■■□ 3.54
NECAB1-204ENST00000522729 CCDC180Q9P1Z9 1646 aa36.68■■■■□ 3.46
NECAB1-204ENST00000522729 DNAJC5BQ9UF47 199 aa35.31■■■■□ 3.24
NECAB1-204ENST00000522729 RB1CC1Q8TDY2 1594 aa35.11■■■■□ 3.21
NECAB1-204ENST00000522729 NACADO15069 1562 aa34.7■■■■□ 3.15
NECAB1-204ENST00000522729 UNC13AQ9UPW8 1703 aa34.51■■■■□ 3.12
NECAB1-204ENST00000522729 PABPN1Q86U42 306 aaKnown RBP eCLIP34.39■■■■□ 3.1
NECAB1-204ENST00000522729 BICRAQ9NZM4 1560 aa34.22■■■■□ 3.07
NECAB1-204ENST00000522729 DCAF8L2P0C7V8 631 aa34.15■■■■□ 3.06
NECAB1-204ENST00000522729 MYO15BQ96JP2 1530 aa34.03■■■■□ 3.04
NECAB1-204ENST00000522729 CC2D2AQ9P2K1 1620 aa33.6■■■□□ 2.97
NECAB1-204ENST00000522729 SHROOM4Q9ULL8 1493 aa33.59■■■□□ 2.97
NECAB1-204ENST00000522729 CECR2Q9BXF3 1484 aa33.51■■■□□ 2.96
NECAB1-204ENST00000522729 ZCCHC6Q5VYS8 1495 aaKnown RBP33.49■■■□□ 2.95
NECAB1-204ENST00000522729 SCRIBQ14160 1630 aa33.39■■■□□ 2.94
NECAB1-204ENST00000522729 DCAF1Q9Y4B6 1507 aa33.39■■■□□ 2.94
NECAB1-204ENST00000522729 EIF4G1Q04637 1599 aaKnown RBP33.38■■■□□ 2.93
NECAB1-204ENST00000522729 DNAJC5Q9H3Z4 198 aa32.76■■■□□ 2.83
NECAB1-204ENST00000522729 CUX2O14529 1486 aa32.24■■■□□ 2.75
NECAB1-204ENST00000522729 ERCC6Q03468 1493 aa32.07■■■□□ 2.72
NECAB1-204ENST00000522729 NCAPD3P42695 1498 aa32■■■□□ 2.71
NECAB1-204ENST00000522729 ATAD2BQ9ULI0 1458 aa31.87■■■□□ 2.69
NECAB1-204ENST00000522729 HMGXB3Q12766 1538 aa31.82■■■□□ 2.68
NECAB1-204ENST00000522729 NESP48681 1621 aa31.8■■■□□ 2.68
NECAB1-204ENST00000522729 SMARCA4P51532 1647 aa31.78■■■□□ 2.68
NECAB1-204ENST00000522729 SMARCA2P51531 1590 aa31.74■■■□□ 2.67
NECAB1-204ENST00000522729 THOC2Q8NI27 1593 aaKnown RBP31.7■■■□□ 2.67
NECAB1-204ENST00000522729 BAZ1BQ9UIG0 1483 aaKnown RBP31.52■■■□□ 2.64
NECAB1-204ENST00000522729 KIF21AQ7Z4S6 1674 aa31.46■■■□□ 2.63
NECAB1-204ENST00000522729 PEG3Q9GZU2 1588 aa31.46■■■□□ 2.63
NECAB1-204ENST00000522729 BAZ1AQ9NRL2 1556 aaPredicted RBP31.46■■■□□ 2.63
NECAB1-204ENST00000522729 LAMC3Q9Y6N6 1575 aa31.44■■■□□ 2.62
NECAB1-204ENST00000522729 MROH2BQ7Z745 1585 aa31.22■■■□□ 2.59
NECAB1-204ENST00000522729 PDS5BQ9NTI5 1447 aa31.16■■■□□ 2.58
NECAB1-204ENST00000522729 TRIM41Q8WV44 630 aa31.09■■■□□ 2.57
NECAB1-204ENST00000522729 WDR62O43379 1518 aa31.05■■■□□ 2.56
NECAB1-204ENST00000522729 MRC2Q9UBG0 1479 aa31.04■■■□□ 2.56
NECAB1-204ENST00000522729 CADPSQ9ULU8 1353 aa30.96■■■□□ 2.55
NECAB1-204ENST00000522729 WIZO95785 1651 aa30.86■■■□□ 2.53
NECAB1-204ENST00000522729 CEP164Q9UPV0 1460 aa30.79■■■□□ 2.52
NECAB1-204ENST00000522729 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.5
NECAB1-204ENST00000522729 CFTRP13569 1480 aa30.56■■■□□ 2.48
NECAB1-204ENST00000522729 URB2Q14146 1524 aaKnown RBP30.55■■■□□ 2.48
NECAB1-204ENST00000522729 OSCARQ8IYS5 282 aa30.47■■■□□ 2.47
NECAB1-204ENST00000522729 RIMBP3CA6NJZ7 1639 aa30.44■■■□□ 2.46
NECAB1-204ENST00000522729 RIMBP3BA6NNM3 1639 aa30.44■■■□□ 2.46
NECAB1-204ENST00000522729 RIMBP3Q9UFD9 1639 aa30.44■■■□□ 2.46
NECAB1-204ENST00000522729 TOP2AP11388 1531 aaKnown RBP30.4■■■□□ 2.46
NECAB1-204ENST00000522729 PRDM2Q13029 1718 aa30.39■■■□□ 2.45
NECAB1-204ENST00000522729 RSF1Q96T23 1441 aaPredicted RBP30.29■■■□□ 2.44
NECAB1-204ENST00000522729 ZNF608Q9ULD9 1512 aaPredicted RBP30.26■■■□□ 2.43
NECAB1-204ENST00000522729 ARHGEF11O15085 1522 aa30.24■■■□□ 2.43
NECAB1-204ENST00000522729 IFT140Q96RY7 1462 aa30.16■■■□□ 2.42
NECAB1-204ENST00000522729 EIF4G3O43432 1585 aaKnown RBP30.14■■■□□ 2.42
NECAB1-204ENST00000522729 TOPBP1Q92547 1522 aa30.07■■■□□ 2.4
NECAB1-204ENST00000522729 CHD1O14646 1710 aa30.04■■■□□ 2.4
NECAB1-204ENST00000522729 CCDC88BA6NC98 1476 aa29.99■■■□□ 2.39
NECAB1-204ENST00000522729 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
NECAB1-204ENST00000522729 ARAP1Q96P48 1450 aa29.93■■■□□ 2.38
NECAB1-204ENST00000522729 TARBP1Q13395 1621 aaKnown RBP29.93■■■□□ 2.38
NECAB1-204ENST00000522729 CYB5RLQ6IPT4 315 aa29.84■■■□□ 2.37
NECAB1-204ENST00000522729 ABCC8Q09428 1581 aa29.83■■■□□ 2.37
NECAB1-204ENST00000522729 AQRO60306 1485 aaKnown RBP eCLIP29.83■■■□□ 2.37
NECAB1-204ENST00000522729 POLA1P09884 1462 aaPredicted RBP29.74■■■□□ 2.35
NECAB1-204ENST00000522729 TRHP20396 242 aaPredicted RBP29.67■■■□□ 2.34
NECAB1-204ENST00000522729 CLASP1Q7Z460 1538 aa29.64■■■□□ 2.34
NECAB1-204ENST00000522729 RAD54L2Q9Y4B4 1467 aa29.62■■■□□ 2.33
NECAB1-204ENST00000522729 FBLN2P98095 1184 aa29.6■■■□□ 2.33
NECAB1-204ENST00000522729 SNAPC4Q5SXM2 1469 aa29.57■■■□□ 2.32
NECAB1-204ENST00000522729 WDR97A6NE52 1622 aa29.52■■■□□ 2.32
NECAB1-204ENST00000522729 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
NECAB1-204ENST00000522729 SYNJ1O43426 1573 aa29.48■■■□□ 2.31
NECAB1-204ENST00000522729 FGD5Q6ZNL6 1462 aa29.47■■■□□ 2.31
NECAB1-204ENST00000522729 SOGA1O94964 1423 aa29.46■■■□□ 2.31
NECAB1-204ENST00000522729 MAGI1Q96QZ7 1491 aaPredicted RBP29.42■■■□□ 2.3
NECAB1-204ENST00000522729 CUX1P39880 1505 aa29.39■■■□□ 2.3
NECAB1-204ENST00000522729 PBRM1Q86U86 1689 aa29.36■■■□□ 2.29
NECAB1-204ENST00000522729 GRIN2BQ13224 1484 aa29.34■■■□□ 2.29
NECAB1-204ENST00000522729 SYNJ2O15056 1496 aa29.33■■■□□ 2.29
NECAB1-204ENST00000522729 CHMP7Q8WUX9 453 aaPredicted RBP29.27■■■□□ 2.28
NECAB1-204ENST00000522729 GAPVD1Q14C86 1478 aa29.25■■■□□ 2.27
NECAB1-204ENST00000522729 ABCA5Q8WWZ7 1642 aa29.2■■■□□ 2.27
NECAB1-204ENST00000522729 AEBP2Q6ZN18 517 aaPredicted RBP29.19■■■□□ 2.26
NECAB1-204ENST00000522729 ERCC6L2Q5T890 1561 aa29.16■■■□□ 2.26
NECAB1-204ENST00000522729 ABCA10Q8WWZ4 1543 aa29.08■■■□□ 2.25
NECAB1-204ENST00000522729 ADAMTS12P58397 1594 aa29.02■■■□□ 2.24
NECAB1-204ENST00000522729 CEP170Q5SW79 1584 aa29.02■■■□□ 2.24
NECAB1-204ENST00000522729 GRIN2AQ12879 1464 aa29.02■■■□□ 2.24
NECAB1-204ENST00000522729 SHROOM2Q13796 1616 aa28.96■■■□□ 2.23
NECAB1-204ENST00000522729 KIF13AQ9H1H9 1805 aa28.94■■■□□ 2.22
NECAB1-204ENST00000522729 NUP160Q12769 1436 aa28.94■■■□□ 2.22
NECAB1-204ENST00000522729 BIVM-ERCC5R4GMW8 1640 aa28.8■■■□□ 2.2
NECAB1-204ENST00000522729 WRNQ14191 1432 aaPredicted RBP eCLIP28.75■■■□□ 2.19
NECAB1-204ENST00000522729 TOP2BQ02880 1626 aa28.74■■■□□ 2.19
NECAB1-204ENST00000522729 FHAD1B1AJZ9 1412 aa28.74■■■□□ 2.19
NECAB1-204ENST00000522729 ERICH3Q5RHP9 1530 aa28.7■■■□□ 2.19
NECAB1-204ENST00000522729 RUSC2Q8N2Y8 1516 aa28.65■■■□□ 2.18
NECAB1-204ENST00000522729 PRG4Q92954 1404 aaPredicted RBP28.63■■■□□ 2.17
NECAB1-204ENST00000522729 DIP2BQ9P265 1576 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms