RNA–Protein interactions for RNA: ENST00000522725.5

EXTL3-212, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-212ENST00000522725 NISCHQ9Y2I1 1504 aa28.94■■■□□ 2.22
EXTL3-212ENST00000522725 ABCC9O60706 1549 aa26.62■■□□□ 1.85
EXTL3-212ENST00000522725 CCDC180Q9P1Z9 1646 aa26.33■■□□□ 1.81
EXTL3-212ENST00000522725 DNAJC5BQ9UF47 199 aa25.4■■□□□ 1.66
EXTL3-212ENST00000522725 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
EXTL3-212ENST00000522725 NACADO15069 1562 aa24.93■■□□□ 1.58
EXTL3-212ENST00000522725 UNC13AQ9UPW8 1703 aa24.73■■□□□ 1.55
EXTL3-212ENST00000522725 PABPN1Q86U42 306 aaKnown RBP eCLIP24.58■■□□□ 1.53
EXTL3-212ENST00000522725 BICRAQ9NZM4 1560 aa24.55■■□□□ 1.52
EXTL3-212ENST00000522725 MYO15BQ96JP2 1530 aa24.5■■□□□ 1.51
EXTL3-212ENST00000522725 DCAF8L2P0C7V8 631 aa24.29■■□□□ 1.48
EXTL3-212ENST00000522725 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
EXTL3-212ENST00000522725 CC2D2AQ9P2K1 1620 aa24.11■■□□□ 1.45
EXTL3-212ENST00000522725 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
EXTL3-212ENST00000522725 DCAF1Q9Y4B6 1507 aa23.97■■□□□ 1.43
EXTL3-212ENST00000522725 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.43
EXTL3-212ENST00000522725 ZCCHC6Q5VYS8 1495 aaKnown RBP23.92■■□□□ 1.42
EXTL3-212ENST00000522725 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
EXTL3-212ENST00000522725 DNAJC5Q9H3Z4 198 aa23.73■■□□□ 1.39
EXTL3-212ENST00000522725 CUX2O14529 1486 aa23.28■■□□□ 1.32
EXTL3-212ENST00000522725 ERCC6Q03468 1493 aa23.01■■□□□ 1.27
EXTL3-212ENST00000522725 NCAPD3P42695 1498 aa22.99■■□□□ 1.27
EXTL3-212ENST00000522725 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
EXTL3-212ENST00000522725 ATAD2BQ9ULI0 1458 aa22.83■■□□□ 1.25
EXTL3-212ENST00000522725 SMARCA2P51531 1590 aa22.77■■□□□ 1.24
EXTL3-212ENST00000522725 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
EXTL3-212ENST00000522725 NESP48681 1621 aa22.75■■□□□ 1.23
EXTL3-212ENST00000522725 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
EXTL3-212ENST00000522725 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
EXTL3-212ENST00000522725 PEG3Q9GZU2 1588 aa22.58■■□□□ 1.2
EXTL3-212ENST00000522725 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
EXTL3-212ENST00000522725 KIF21AQ7Z4S6 1674 aa22.53■■□□□ 1.2
EXTL3-212ENST00000522725 BAZ1AQ9NRL2 1556 aaPredicted RBP22.51■■□□□ 1.19
EXTL3-212ENST00000522725 PDS5BQ9NTI5 1447 aa22.39■■□□□ 1.17
EXTL3-212ENST00000522725 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
EXTL3-212ENST00000522725 WDR62O43379 1518 aa22.3■■□□□ 1.16
EXTL3-212ENST00000522725 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
EXTL3-212ENST00000522725 MROH2BQ7Z745 1585 aa22.27■■□□□ 1.16
EXTL3-212ENST00000522725 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
EXTL3-212ENST00000522725 CEP164Q9UPV0 1460 aa22.07■■□□□ 1.12
EXTL3-212ENST00000522725 WIZO95785 1651 aa21.98■■□□□ 1.11
EXTL3-212ENST00000522725 FANCD2Q9BXW9 1451 aa21.97■■□□□ 1.11
EXTL3-212ENST00000522725 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
EXTL3-212ENST00000522725 CFTRP13569 1480 aa21.9■■□□□ 1.1
EXTL3-212ENST00000522725 RIMBP3CA6NJZ7 1639 aa21.88■■□□□ 1.09
EXTL3-212ENST00000522725 RIMBP3BA6NNM3 1639 aa21.88■■□□□ 1.09
EXTL3-212ENST00000522725 RIMBP3Q9UFD9 1639 aa21.88■■□□□ 1.09
EXTL3-212ENST00000522725 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
EXTL3-212ENST00000522725 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
EXTL3-212ENST00000522725 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
EXTL3-212ENST00000522725 TOP2AP11388 1531 aaKnown RBP21.71■■□□□ 1.07
EXTL3-212ENST00000522725 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
EXTL3-212ENST00000522725 IFT140Q96RY7 1462 aa21.64■■□□□ 1.06
EXTL3-212ENST00000522725 EIF4G3O43432 1585 aaKnown RBP21.58■■□□□ 1.05
EXTL3-212ENST00000522725 RSF1Q96T23 1441 aaPredicted RBP21.58■■□□□ 1.05
EXTL3-212ENST00000522725 TOPBP1Q92547 1522 aa21.53■■□□□ 1.04
EXTL3-212ENST00000522725 CHD1O14646 1710 aa21.52■■□□□ 1.04
EXTL3-212ENST00000522725 ARAP1Q96P48 1450 aa21.5■■□□□ 1.03
EXTL3-212ENST00000522725 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
EXTL3-212ENST00000522725 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
EXTL3-212ENST00000522725 DNMBPQ6XZF7 1577 aa21.44■■□□□ 1.02
EXTL3-212ENST00000522725 CYB5RLQ6IPT4 315 aa21.41■■□□□ 1.02
EXTL3-212ENST00000522725 CCDC88BA6NC98 1476 aa21.39■■□□□ 1.01
EXTL3-212ENST00000522725 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 1
EXTL3-212ENST00000522725 TRHP20396 242 aaPredicted RBP21.29■■□□□ 1
EXTL3-212ENST00000522725 CLASP1Q7Z460 1538 aa21.29■■□□□ 1
EXTL3-212ENST00000522725 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
EXTL3-212ENST00000522725 WDR97A6NE52 1622 aa21.24■□□□□ 0.99
EXTL3-212ENST00000522725 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
EXTL3-212ENST00000522725 SNAPC4Q5SXM2 1469 aa21.15■□□□□ 0.98
EXTL3-212ENST00000522725 FBLN2P98095 1184 aa21.14■□□□□ 0.97
EXTL3-212ENST00000522725 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
EXTL3-212ENST00000522725 MAGI1Q96QZ7 1491 aaPredicted RBP21.12■□□□□ 0.97
EXTL3-212ENST00000522725 TDRD9Q8NDG6 1382 aaKnown RBP21.08■□□□□ 0.96
EXTL3-212ENST00000522725 SOGA1O94964 1423 aa21.07■□□□□ 0.96
EXTL3-212ENST00000522725 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
EXTL3-212ENST00000522725 FGD5Q6ZNL6 1462 aa21.05■□□□□ 0.96
EXTL3-212ENST00000522725 SYNJ2O15056 1496 aa21.03■□□□□ 0.96
EXTL3-212ENST00000522725 GRIN2BQ13224 1484 aa21.02■□□□□ 0.96
EXTL3-212ENST00000522725 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
EXTL3-212ENST00000522725 GAPVD1Q14C86 1478 aa20.99■□□□□ 0.95
EXTL3-212ENST00000522725 CUX1P39880 1505 aa20.97■□□□□ 0.95
EXTL3-212ENST00000522725 CHMP7Q8WUX9 453 aaPredicted RBP20.95■□□□□ 0.94
EXTL3-212ENST00000522725 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.94
EXTL3-212ENST00000522725 ERCC6L2Q5T890 1561 aa20.84■□□□□ 0.93
EXTL3-212ENST00000522725 ABCA10Q8WWZ4 1543 aa20.82■□□□□ 0.92
EXTL3-212ENST00000522725 KIF13AQ9H1H9 1805 aa20.8■□□□□ 0.92
EXTL3-212ENST00000522725 SHROOM2Q13796 1616 aa20.79■□□□□ 0.92
EXTL3-212ENST00000522725 CEP170Q5SW79 1584 aa20.78■□□□□ 0.92
EXTL3-212ENST00000522725 GRIN2AQ12879 1464 aa20.77■□□□□ 0.92
EXTL3-212ENST00000522725 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
EXTL3-212ENST00000522725 NUP160Q12769 1436 aa20.75■□□□□ 0.91
EXTL3-212ENST00000522725 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.88
EXTL3-212ENST00000522725 BIVM-ERCC5R4GMW8 1640 aa20.57■□□□□ 0.88
EXTL3-212ENST00000522725 ERICH3Q5RHP9 1530 aa20.56■□□□□ 0.88
EXTL3-212ENST00000522725 WRNQ14191 1432 aaPredicted RBP eCLIP20.55■□□□□ 0.88
EXTL3-212ENST00000522725 MAPKBP1O60336 1514 aa20.55■□□□□ 0.88
EXTL3-212ENST00000522725 ABCC10Q5T3U5 1492 aa20.54■□□□□ 0.88
EXTL3-212ENST00000522725 DIP2BQ9P265 1576 aa20.53■□□□□ 0.88
EXTL3-212ENST00000522725 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms