RNA–Protein interactions for RNA: ENST00000522712.6

C11orf49-205, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-205ENST00000522712 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
C11orf49-205ENST00000522712 CCDC180Q9P1Z9 1646 aa19■□□□□ 0.63
C11orf49-205ENST00000522712 ABCC9O60706 1549 aa18.83■□□□□ 0.6
C11orf49-205ENST00000522712 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
C11orf49-205ENST00000522712 RB1CC1Q8TDY2 1594 aa18■□□□□ 0.47
C11orf49-205ENST00000522712 NACADO15069 1562 aa17.94■□□□□ 0.46
C11orf49-205ENST00000522712 MYO15BQ96JP2 1530 aa17.75■□□□□ 0.43
C11orf49-205ENST00000522712 ZCCHC6Q5VYS8 1495 aaKnown RBP17.72■□□□□ 0.43
C11orf49-205ENST00000522712 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
C11orf49-205ENST00000522712 PABPN1Q86U42 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
C11orf49-205ENST00000522712 UNC13AQ9UPW8 1703 aa17.57■□□□□ 0.4
C11orf49-205ENST00000522712 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
C11orf49-205ENST00000522712 BICRAQ9NZM4 1560 aa17.46■□□□□ 0.39
C11orf49-205ENST00000522712 AEBP2Q6ZN18 517 aaPredicted RBP17.42■□□□□ 0.38
C11orf49-205ENST00000522712 SCRIBQ14160 1630 aa17.36■□□□□ 0.37
C11orf49-205ENST00000522712 SHROOM4Q9ULL8 1493 aa17.22■□□□□ 0.35
C11orf49-205ENST00000522712 EIF4G1Q04637 1599 aaKnown RBP17.01■□□□□ 0.31
C11orf49-205ENST00000522712 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
C11orf49-205ENST00000522712 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
C11orf49-205ENST00000522712 CHIC1Q5VXU3 224 aa16.86■□□□□ 0.29
C11orf49-205ENST00000522712 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
C11orf49-205ENST00000522712 NCAPD3P42695 1498 aa16.57■□□□□ 0.24
C11orf49-205ENST00000522712 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
C11orf49-205ENST00000522712 BAZ1AQ9NRL2 1556 aaPredicted RBP16.54■□□□□ 0.24
C11orf49-205ENST00000522712 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
C11orf49-205ENST00000522712 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
C11orf49-205ENST00000522712 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
C11orf49-205ENST00000522712 BAZ1BQ9UIG0 1483 aaKnown RBP16.41■□□□□ 0.22
C11orf49-205ENST00000522712 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
C11orf49-205ENST00000522712 WIZO95785 1651 aa16.26■□□□□ 0.19
C11orf49-205ENST00000522712 NESP48681 1621 aa16.23■□□□□ 0.19
C11orf49-205ENST00000522712 ERCC6Q03468 1493 aa16.23■□□□□ 0.19
C11orf49-205ENST00000522712 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
C11orf49-205ENST00000522712 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
C11orf49-205ENST00000522712 CUX2O14529 1486 aa16.1■□□□□ 0.17
C11orf49-205ENST00000522712 CADPSQ9ULU8 1353 aa16.09■□□□□ 0.17
C11orf49-205ENST00000522712 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
C11orf49-205ENST00000522712 PDS5BQ9NTI5 1447 aa16.06■□□□□ 0.16
C11orf49-205ENST00000522712 KIF21AQ7Z4S6 1674 aa16■□□□□ 0.15
C11orf49-205ENST00000522712 THOC2Q8NI27 1593 aaKnown RBP15.98■□□□□ 0.15
C11orf49-205ENST00000522712 CFTRP13569 1480 aa15.94■□□□□ 0.14
C11orf49-205ENST00000522712 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
C11orf49-205ENST00000522712 FANCD2Q9BXW9 1451 aa15.9■□□□□ 0.14
C11orf49-205ENST00000522712 MRC2Q9UBG0 1479 aa15.9■□□□□ 0.14
C11orf49-205ENST00000522712 CEP164Q9UPV0 1460 aa15.89■□□□□ 0.13
C11orf49-205ENST00000522712 DNAJC5Q9H3Z4 198 aa15.86■□□□□ 0.13
C11orf49-205ENST00000522712 WDR62O43379 1518 aa15.83■□□□□ 0.12
C11orf49-205ENST00000522712 PRDM2Q13029 1718 aa15.76■□□□□ 0.11
C11orf49-205ENST00000522712 URB2Q14146 1524 aaKnown RBP15.74■□□□□ 0.11
C11orf49-205ENST00000522712 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
C11orf49-205ENST00000522712 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
C11orf49-205ENST00000522712 ABCC8Q09428 1581 aa15.6■□□□□ 0.09
C11orf49-205ENST00000522712 DNMBPQ6XZF7 1577 aa15.57■□□□□ 0.08
C11orf49-205ENST00000522712 IFT140Q96RY7 1462 aa15.56■□□□□ 0.08
C11orf49-205ENST00000522712 ZNF608Q9ULD9 1512 aaPredicted RBP15.52■□□□□ 0.07
C11orf49-205ENST00000522712 POLA1P09884 1462 aaPredicted RBP15.47■□□□□ 0.07
C11orf49-205ENST00000522712 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
C11orf49-205ENST00000522712 CUX1P39880 1505 aa15.44■□□□□ 0.06
C11orf49-205ENST00000522712 TARBP1Q13395 1621 aaKnown RBP15.44■□□□□ 0.06
C11orf49-205ENST00000522712 SOGA1O94964 1423 aa15.43■□□□□ 0.06
C11orf49-205ENST00000522712 AQRO60306 1485 aaKnown RBP eCLIP15.43■□□□□ 0.06
C11orf49-205ENST00000522712 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
C11orf49-205ENST00000522712 FGD5Q6ZNL6 1462 aa15.41■□□□□ 0.06
C11orf49-205ENST00000522712 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
C11orf49-205ENST00000522712 TDRD9Q8NDG6 1382 aaKnown RBP15.38■□□□□ 0.05
C11orf49-205ENST00000522712 FBLN2P98095 1184 aa15.31■□□□□ 0.04
C11orf49-205ENST00000522712 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
C11orf49-205ENST00000522712 TRIM41Q8WV44 630 aa15.29■□□□□ 0.04
C11orf49-205ENST00000522712 WDR97A6NE52 1622 aa15.28■□□□□ 0.04
C11orf49-205ENST00000522712 CHD1O14646 1710 aa15.26■□□□□ 0.03
C11orf49-205ENST00000522712 ABCA10Q8WWZ4 1543 aa15.25■□□□□ 0.03
C11orf49-205ENST00000522712 GRIN2BQ13224 1484 aa15.25■□□□□ 0.03
C11orf49-205ENST00000522712 SNAPC4Q5SXM2 1469 aa15.25■□□□□ 0.03
C11orf49-205ENST00000522712 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
C11orf49-205ENST00000522712 GAPVD1Q14C86 1478 aa15.24■□□□□ 0.03
C11orf49-205ENST00000522712 SYNJ1O43426 1573 aa15.24■□□□□ 0.03
C11orf49-205ENST00000522712 BIVM-ERCC5R4GMW8 1640 aa15.23■□□□□ 0.03
C11orf49-205ENST00000522712 CHMP7Q8WUX9 453 aaPredicted RBP15.22■□□□□ 0.03
C11orf49-205ENST00000522712 MAGI1Q96QZ7 1491 aaPredicted RBP15.21■□□□□ 0.03
C11orf49-205ENST00000522712 ABCA5Q8WWZ7 1642 aa15.18■□□□□ 0.02
C11orf49-205ENST00000522712 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
C11orf49-205ENST00000522712 RIMBP3CA6NJZ7 1639 aa15.17■□□□□ 0.02
C11orf49-205ENST00000522712 RIMBP3BA6NNM3 1639 aa15.17■□□□□ 0.02
C11orf49-205ENST00000522712 RIMBP3Q9UFD9 1639 aa15.17■□□□□ 0.02
C11orf49-205ENST00000522712 ARHGEF11O15085 1522 aa15.17■□□□□ 0.02
C11orf49-205ENST00000522712 SYNJ2O15056 1496 aa15.16■□□□□ 0.02
C11orf49-205ENST00000522712 CYB5RLQ6IPT4 315 aa15.1■□□□□ 0.01
C11orf49-205ENST00000522712 CLASP1Q7Z460 1538 aa15.08■□□□□ 0.01
C11orf49-205ENST00000522712 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
C11orf49-205ENST00000522712 FHAD1B1AJZ9 1412 aa15.05■□□□□ -0
C11orf49-205ENST00000522712 GRIN2AQ12879 1464 aa15.05■□□□□ -0
C11orf49-205ENST00000522712 ADAMTS12P58397 1594 aa15.05■□□□□ -0
C11orf49-205ENST00000522712 ARAP1Q96P48 1450 aa15.03■□□□□ -0
C11orf49-205ENST00000522712 NUP160Q12769 1436 aa14.99□□□□□ -0.01
C11orf49-205ENST00000522712 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
C11orf49-205ENST00000522712 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
C11orf49-205ENST00000522712 IGF1RP08069 1367 aa14.97□□□□□ -0.01
C11orf49-205ENST00000522712 JPH4Q96JJ6 628 aa14.89□□□□□ -0.03
C11orf49-205ENST00000522712 ERCC6L2Q5T890 1561 aa14.89□□□□□ -0.03
C11orf49-205ENST00000522712 CARMIL1Q5VZK9 1371 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms