RNA–Protein interactions for RNA: ENST00000522709.5

EFR3A-206, Transcript of EFR3 homolog A, humanhuman

TSL 5

Gene EFR3A, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-206ENST00000522709 NISCHQ9Y2I1 1504 aa46.67■■■■■ 5.06
EFR3A-206ENST00000522709 ABCC9O60706 1549 aa42.46■■■■■ 4.39
EFR3A-206ENST00000522709 CCDC180Q9P1Z9 1646 aa42.01■■■■■ 4.32
EFR3A-206ENST00000522709 RB1CC1Q8TDY2 1594 aa40.19■■■■■ 4.02
EFR3A-206ENST00000522709 DNAJC5BQ9UF47 199 aa40.13■■■■■ 4.01
EFR3A-206ENST00000522709 NACADO15069 1562 aa39.8■■■■□ 3.96
EFR3A-206ENST00000522709 DCAF8L2P0C7V8 631 aa39.64■■■■□ 3.94
EFR3A-206ENST00000522709 PABPN1Q86U42 306 aaKnown RBP eCLIP39.49■■■■□ 3.91
EFR3A-206ENST00000522709 UNC13AQ9UPW8 1703 aa39.3■■■■□ 3.88
EFR3A-206ENST00000522709 MYO15BQ96JP2 1530 aa39.09■■■■□ 3.85
EFR3A-206ENST00000522709 BICRAQ9NZM4 1560 aa39.04■■■■□ 3.84
EFR3A-206ENST00000522709 ZCCHC6Q5VYS8 1495 aaKnown RBP38.6■■■■□ 3.77
EFR3A-206ENST00000522709 DCAF1Q9Y4B6 1507 aa38.48■■■■□ 3.75
EFR3A-206ENST00000522709 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
EFR3A-206ENST00000522709 SCRIBQ14160 1630 aa38.34■■■■□ 3.73
EFR3A-206ENST00000522709 CC2D2AQ9P2K1 1620 aa38.3■■■■□ 3.72
EFR3A-206ENST00000522709 CECR2Q9BXF3 1484 aa38.25■■■■□ 3.71
EFR3A-206ENST00000522709 EIF4G1Q04637 1599 aaKnown RBP38.12■■■■□ 3.69
EFR3A-206ENST00000522709 DNAJC5Q9H3Z4 198 aa37.07■■■■□ 3.52
EFR3A-206ENST00000522709 NCAPD3P42695 1498 aa36.75■■■■□ 3.47
EFR3A-206ENST00000522709 CUX2O14529 1486 aa36.68■■■■□ 3.46
EFR3A-206ENST00000522709 ERCC6Q03468 1493 aa36.68■■■■□ 3.46
EFR3A-206ENST00000522709 ATAD2BQ9ULI0 1458 aa36.62■■■■□ 3.45
EFR3A-206ENST00000522709 SMARCA4P51532 1647 aa36.49■■■■□ 3.43
EFR3A-206ENST00000522709 SMARCA2P51531 1590 aa36.48■■■■□ 3.43
EFR3A-206ENST00000522709 HMGXB3Q12766 1538 aa36.45■■■■□ 3.43
EFR3A-206ENST00000522709 NESP48681 1621 aa36.37■■■■□ 3.41
EFR3A-206ENST00000522709 BAZ1BQ9UIG0 1483 aaKnown RBP36.26■■■■□ 3.4
EFR3A-206ENST00000522709 BAZ1AQ9NRL2 1556 aaPredicted RBP36.25■■■■□ 3.39
EFR3A-206ENST00000522709 PEG3Q9GZU2 1588 aa36.1■■■■□ 3.37
EFR3A-206ENST00000522709 THOC2Q8NI27 1593 aaKnown RBP36.04■■■■□ 3.36
EFR3A-206ENST00000522709 LAMC3Q9Y6N6 1575 aa36■■■■□ 3.35
EFR3A-206ENST00000522709 MROH2BQ7Z745 1585 aa35.99■■■■□ 3.35
EFR3A-206ENST00000522709 KIF21AQ7Z4S6 1674 aa35.87■■■■□ 3.33
EFR3A-206ENST00000522709 PDS5BQ9NTI5 1447 aa35.81■■■■□ 3.32
EFR3A-206ENST00000522709 CADPSQ9ULU8 1353 aa35.64■■■■□ 3.3
EFR3A-206ENST00000522709 WIZO95785 1651 aa35.56■■■■□ 3.28
EFR3A-206ENST00000522709 MRC2Q9UBG0 1479 aa35.54■■■■□ 3.28
EFR3A-206ENST00000522709 WDR62O43379 1518 aa35.45■■■■□ 3.27
EFR3A-206ENST00000522709 TRIM41Q8WV44 630 aa35.39■■■■□ 3.26
EFR3A-206ENST00000522709 CEP164Q9UPV0 1460 aa35.33■■■■□ 3.25
EFR3A-206ENST00000522709 FANCD2Q9BXW9 1451 aa35.26■■■■□ 3.23
EFR3A-206ENST00000522709 CFTRP13569 1480 aa35.15■■■■□ 3.22
EFR3A-206ENST00000522709 RSF1Q96T23 1441 aaPredicted RBP35.09■■■■□ 3.21
EFR3A-206ENST00000522709 TOP2AP11388 1531 aaKnown RBP35.05■■■■□ 3.2
EFR3A-206ENST00000522709 URB2Q14146 1524 aaKnown RBP35■■■■□ 3.19
EFR3A-206ENST00000522709 OSCARQ8IYS5 282 aa34.95■■■■□ 3.19
EFR3A-206ENST00000522709 PRDM2Q13029 1718 aa34.77■■■■□ 3.16
EFR3A-206ENST00000522709 CCDC88BA6NC98 1476 aa34.66■■■■□ 3.14
EFR3A-206ENST00000522709 ZNF608Q9ULD9 1512 aaPredicted RBP34.65■■■■□ 3.14
EFR3A-206ENST00000522709 IFT140Q96RY7 1462 aa34.62■■■■□ 3.13
EFR3A-206ENST00000522709 RIMBP3CA6NJZ7 1639 aa34.58■■■■□ 3.13
EFR3A-206ENST00000522709 RIMBP3BA6NNM3 1639 aa34.58■■■■□ 3.13
EFR3A-206ENST00000522709 RIMBP3Q9UFD9 1639 aa34.58■■■■□ 3.13
EFR3A-206ENST00000522709 TOPBP1Q92547 1522 aa34.55■■■■□ 3.12
EFR3A-206ENST00000522709 EIF4G3O43432 1585 aaKnown RBP34.42■■■■□ 3.1
EFR3A-206ENST00000522709 ARHGEF11O15085 1522 aa34.42■■■■□ 3.1
EFR3A-206ENST00000522709 ABCC8Q09428 1581 aa34.4■■■■□ 3.1
EFR3A-206ENST00000522709 DNMBPQ6XZF7 1577 aa34.38■■■■□ 3.09
EFR3A-206ENST00000522709 AQRO60306 1485 aaKnown RBP eCLIP34.28■■■■□ 3.08
EFR3A-206ENST00000522709 TARBP1Q13395 1621 aaKnown RBP34.26■■■■□ 3.07
EFR3A-206ENST00000522709 CHD1O14646 1710 aa34.24■■■■□ 3.07
EFR3A-206ENST00000522709 CYB5RLQ6IPT4 315 aa34.21■■■■□ 3.07
EFR3A-206ENST00000522709 POLA1P09884 1462 aaPredicted RBP34.17■■■■□ 3.06
EFR3A-206ENST00000522709 FBLN2P98095 1184 aa34.16■■■■□ 3.06
EFR3A-206ENST00000522709 RAD54L2Q9Y4B4 1467 aa34.08■■■■□ 3.05
EFR3A-206ENST00000522709 ARAP1Q96P48 1450 aa34.06■■■■□ 3.04
EFR3A-206ENST00000522709 TDRD9Q8NDG6 1382 aaKnown RBP34.01■■■■□ 3.04
EFR3A-206ENST00000522709 SOGA1O94964 1423 aa34.01■■■■□ 3.03
EFR3A-206ENST00000522709 TRHP20396 242 aaPredicted RBP33.97■■■■□ 3.03
EFR3A-206ENST00000522709 SNAPC4Q5SXM2 1469 aa33.93■■■■□ 3.02
EFR3A-206ENST00000522709 FGD5Q6ZNL6 1462 aa33.92■■■■□ 3.02
EFR3A-206ENST00000522709 WDR97A6NE52 1622 aa33.84■■■■□ 3.01
EFR3A-206ENST00000522709 CUX1P39880 1505 aa33.84■■■■□ 3.01
EFR3A-206ENST00000522709 CLASP1Q7Z460 1538 aa33.82■■■■□ 3
EFR3A-206ENST00000522709 CHMP7Q8WUX9 453 aaPredicted RBP33.81■■■■□ 3
EFR3A-206ENST00000522709 MAGI1Q96QZ7 1491 aaPredicted RBP33.77■■■■□ 3
EFR3A-206ENST00000522709 SYNJ1O43426 1573 aa33.77■■■■□ 3
EFR3A-206ENST00000522709 GRIN2BQ13224 1484 aa33.75■■■□□ 2.99
EFR3A-206ENST00000522709 SYNJ2O15056 1496 aa33.68■■■□□ 2.98
EFR3A-206ENST00000522709 PBRM1Q86U86 1689 aa33.61■■■□□ 2.97
EFR3A-206ENST00000522709 GAPVD1Q14C86 1478 aa33.59■■■□□ 2.97
EFR3A-206ENST00000522709 ABCA10Q8WWZ4 1543 aa33.48■■■□□ 2.95
EFR3A-206ENST00000522709 ABCA5Q8WWZ7 1642 aa33.48■■■□□ 2.95
EFR3A-206ENST00000522709 SUPT5HO00267 1087 aaKnown RBP33.34■■■□□ 2.93
EFR3A-206ENST00000522709 GRIN2AQ12879 1464 aa33.32■■■□□ 2.92
EFR3A-206ENST00000522709 ERCC6L2Q5T890 1561 aa33.3■■■□□ 2.92
EFR3A-206ENST00000522709 WRNQ14191 1432 aaPredicted RBP eCLIP33.28■■■□□ 2.92
EFR3A-206ENST00000522709 ADAMTS12P58397 1594 aa33.26■■■□□ 2.92
EFR3A-206ENST00000522709 CEP170Q5SW79 1584 aa33.24■■■□□ 2.91
EFR3A-206ENST00000522709 AEBP2Q6ZN18 517 aaPredicted RBP33.23■■■□□ 2.91
EFR3A-206ENST00000522709 NUP160Q12769 1436 aa33.2■■■□□ 2.91
EFR3A-206ENST00000522709 TOP2BQ02880 1626 aa33.17■■■□□ 2.9
EFR3A-206ENST00000522709 BIVM-ERCC5R4GMW8 1640 aa33.17■■■□□ 2.9
EFR3A-206ENST00000522709 FHAD1B1AJZ9 1412 aa33.14■■■□□ 2.9
EFR3A-206ENST00000522709 SHROOM2Q13796 1616 aa33.1■■■□□ 2.89
EFR3A-206ENST00000522709 ERICH3Q5RHP9 1530 aa33.05■■■□□ 2.88
EFR3A-206ENST00000522709 PRG4Q92954 1404 aaPredicted RBP32.94■■■□□ 2.86
EFR3A-206ENST00000522709 JPH4Q96JJ6 628 aa32.88■■■□□ 2.85
EFR3A-206ENST00000522709 KIF13AQ9H1H9 1805 aa32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms