RNA–Protein interactions for RNA: ENST00000522701.5

LPL-205, Transcript of lipoprotein lipase, humanhuman

TSL 4

Gene LPL, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPL-205ENST00000522701 NISCHQ9Y2I1 1504 aa35.76■■■■□ 3.31
LPL-205ENST00000522701 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
LPL-205ENST00000522701 ABCC9O60706 1549 aa31.21■■■□□ 2.59
LPL-205ENST00000522701 RB1CC1Q8TDY2 1594 aa29.95■■■□□ 2.39
LPL-205ENST00000522701 NACADO15069 1562 aa29.91■■■□□ 2.38
LPL-205ENST00000522701 DCAF8L2P0C7V8 631 aa29.89■■■□□ 2.38
LPL-205ENST00000522701 ZCCHC6Q5VYS8 1495 aaKnown RBP29.76■■■□□ 2.35
LPL-205ENST00000522701 MYO15BQ96JP2 1530 aa29.72■■■□□ 2.35
LPL-205ENST00000522701 DCAF1Q9Y4B6 1507 aa29.57■■■□□ 2.32
LPL-205ENST00000522701 UNC13AQ9UPW8 1703 aa29.33■■■□□ 2.29
LPL-205ENST00000522701 PABPN1Q86U42 306 aaKnown RBP eCLIP29.18■■■□□ 2.26
LPL-205ENST00000522701 BICRAQ9NZM4 1560 aa29.13■■■□□ 2.25
LPL-205ENST00000522701 SCRIBQ14160 1630 aa29.02■■■□□ 2.24
LPL-205ENST00000522701 DNAJC5BQ9UF47 199 aa28.81■■■□□ 2.2
LPL-205ENST00000522701 SHROOM4Q9ULL8 1493 aa28.72■■■□□ 2.19
LPL-205ENST00000522701 EIF4G1Q04637 1599 aaKnown RBP28.32■■■□□ 2.12
LPL-205ENST00000522701 CC2D2AQ9P2K1 1620 aa28.23■■■□□ 2.11
LPL-205ENST00000522701 CECR2Q9BXF3 1484 aa28.04■■■□□ 2.08
LPL-205ENST00000522701 SMARCA4P51532 1647 aa27.75■■■□□ 2.03
LPL-205ENST00000522701 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
LPL-205ENST00000522701 NCAPD3P42695 1498 aa27.64■■■□□ 2.01
LPL-205ENST00000522701 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.01
LPL-205ENST00000522701 MROH2BQ7Z745 1585 aa27.58■■■□□ 2.01
LPL-205ENST00000522701 SMARCA2P51531 1590 aa27.56■■■□□ 2
LPL-205ENST00000522701 PEG3Q9GZU2 1588 aa27.49■■□□□ 1.99
LPL-205ENST00000522701 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
LPL-205ENST00000522701 BAZ1BQ9UIG0 1483 aaKnown RBP27.37■■□□□ 1.97
LPL-205ENST00000522701 WIZO95785 1651 aa27.27■■□□□ 1.96
LPL-205ENST00000522701 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
LPL-205ENST00000522701 NESP48681 1621 aa27.01■■□□□ 1.92
LPL-205ENST00000522701 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.9
LPL-205ENST00000522701 LAMC3Q9Y6N6 1575 aa26.88■■□□□ 1.89
LPL-205ENST00000522701 ERCC6Q03468 1493 aa26.85■■□□□ 1.89
LPL-205ENST00000522701 CADPSQ9ULU8 1353 aa26.82■■□□□ 1.88
LPL-205ENST00000522701 PDS5BQ9NTI5 1447 aa26.7■■□□□ 1.86
LPL-205ENST00000522701 CCDC88BA6NC98 1476 aa26.67■■□□□ 1.86
LPL-205ENST00000522701 KIF21AQ7Z4S6 1674 aa26.66■■□□□ 1.86
LPL-205ENST00000522701 CFTRP13569 1480 aa26.64■■□□□ 1.86
LPL-205ENST00000522701 CUX2O14529 1486 aa26.62■■□□□ 1.85
LPL-205ENST00000522701 THOC2Q8NI27 1593 aaKnown RBP26.6■■□□□ 1.85
LPL-205ENST00000522701 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
LPL-205ENST00000522701 SUPT5HO00267 1087 aaKnown RBP26.46■■□□□ 1.83
LPL-205ENST00000522701 MRC2Q9UBG0 1479 aa26.44■■□□□ 1.82
LPL-205ENST00000522701 CEP164Q9UPV0 1460 aa26.44■■□□□ 1.82
LPL-205ENST00000522701 PRDM2Q13029 1718 aa26.4■■□□□ 1.82
LPL-205ENST00000522701 WDR62O43379 1518 aa26.37■■□□□ 1.81
LPL-205ENST00000522701 URB2Q14146 1524 aaKnown RBP26.26■■□□□ 1.79
LPL-205ENST00000522701 TOPBP1Q92547 1522 aa26.08■■□□□ 1.77
LPL-205ENST00000522701 ABCC8Q09428 1581 aa26.03■■□□□ 1.76
LPL-205ENST00000522701 DNMBPQ6XZF7 1577 aa26.02■■□□□ 1.76
LPL-205ENST00000522701 DNAJC5Q9H3Z4 198 aa25.95■■□□□ 1.74
LPL-205ENST00000522701 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
LPL-205ENST00000522701 CUX1P39880 1505 aa25.87■■□□□ 1.73
LPL-205ENST00000522701 POLA1P09884 1462 aaPredicted RBP25.85■■□□□ 1.73
LPL-205ENST00000522701 ZNF608Q9ULD9 1512 aaPredicted RBP25.84■■□□□ 1.73
LPL-205ENST00000522701 TARBP1Q13395 1621 aaKnown RBP25.81■■□□□ 1.72
LPL-205ENST00000522701 FGD5Q6ZNL6 1462 aa25.77■■□□□ 1.72
LPL-205ENST00000522701 RAD54L2Q9Y4B4 1467 aa25.77■■□□□ 1.72
LPL-205ENST00000522701 SOGA1O94964 1423 aa25.74■■□□□ 1.71
LPL-205ENST00000522701 EIF4G3O43432 1585 aaKnown RBP25.69■■□□□ 1.7
LPL-205ENST00000522701 AQRO60306 1485 aaKnown RBP eCLIP25.68■■□□□ 1.7
LPL-205ENST00000522701 WRNQ14191 1432 aaPredicted RBP eCLIP25.64■■□□□ 1.7
LPL-205ENST00000522701 TDRD9Q8NDG6 1382 aaKnown RBP25.62■■□□□ 1.69
LPL-205ENST00000522701 SYNJ1O43426 1573 aa25.61■■□□□ 1.69
LPL-205ENST00000522701 BIVM-ERCC5R4GMW8 1640 aa25.6■■□□□ 1.69
LPL-205ENST00000522701 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
LPL-205ENST00000522701 WDR97A6NE52 1622 aa25.57■■□□□ 1.68
LPL-205ENST00000522701 OSCARQ8IYS5 282 aa25.52■■□□□ 1.68
LPL-205ENST00000522701 ABCA10Q8WWZ4 1543 aa25.52■■□□□ 1.68
LPL-205ENST00000522701 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
LPL-205ENST00000522701 GAPVD1Q14C86 1478 aa25.43■■□□□ 1.66
LPL-205ENST00000522701 ABCA5Q8WWZ7 1642 aa25.42■■□□□ 1.66
LPL-205ENST00000522701 SNAPC4Q5SXM2 1469 aa25.41■■□□□ 1.66
LPL-205ENST00000522701 CHD1O14646 1710 aa25.4■■□□□ 1.66
LPL-205ENST00000522701 PBRM1Q86U86 1689 aa25.38■■□□□ 1.65
LPL-205ENST00000522701 MAGI1Q96QZ7 1491 aaPredicted RBP25.36■■□□□ 1.65
LPL-205ENST00000522701 FBLN2P98095 1184 aa25.34■■□□□ 1.65
LPL-205ENST00000522701 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
LPL-205ENST00000522701 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
LPL-205ENST00000522701 ERICH3Q5RHP9 1530 aa25.19■■□□□ 1.62
LPL-205ENST00000522701 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
LPL-205ENST00000522701 CLASP1Q7Z460 1538 aa25.14■■□□□ 1.62
LPL-205ENST00000522701 FHAD1B1AJZ9 1412 aa25.13■■□□□ 1.61
LPL-205ENST00000522701 RIMBP3CA6NJZ7 1639 aa25.13■■□□□ 1.61
LPL-205ENST00000522701 RIMBP3BA6NNM3 1639 aa25.13■■□□□ 1.61
LPL-205ENST00000522701 RIMBP3Q9UFD9 1639 aa25.13■■□□□ 1.61
LPL-205ENST00000522701 GRIN2AQ12879 1464 aa25.11■■□□□ 1.61
LPL-205ENST00000522701 ARHGEF11O15085 1522 aa25.11■■□□□ 1.61
LPL-205ENST00000522701 KIF27Q86VH2 1401 aa25.1■■□□□ 1.61
LPL-205ENST00000522701 IGF1RP08069 1367 aa25.06■■□□□ 1.6
LPL-205ENST00000522701 TRIM41Q8WV44 630 aa25.03■■□□□ 1.6
LPL-205ENST00000522701 NUP160Q12769 1436 aa25.02■■□□□ 1.6
LPL-205ENST00000522701 CEP170Q5SW79 1584 aa25.01■■□□□ 1.59
LPL-205ENST00000522701 RUSC2Q8N2Y8 1516 aa24.93■■□□□ 1.58
LPL-205ENST00000522701 CUL7Q14999 1698 aa24.93■■□□□ 1.58
LPL-205ENST00000522701 ARAP1Q96P48 1450 aa24.92■■□□□ 1.58
LPL-205ENST00000522701 CYB5RLQ6IPT4 315 aa24.89■■□□□ 1.58
LPL-205ENST00000522701 CARMIL1Q5VZK9 1371 aa24.89■■□□□ 1.57
LPL-205ENST00000522701 SHROOM2Q13796 1616 aa24.84■■□□□ 1.57
LPL-205ENST00000522701 ERCC6L2Q5T890 1561 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms