RNA–Protein interactions for RNA: ENST00000522698.1

EXTL3-211, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-211ENST00000522698 NISCHQ9Y2I1 1504 aa33.28■■■□□ 2.92
EXTL3-211ENST00000522698 ABCC9O60706 1549 aa29.62■■■□□ 2.33
EXTL3-211ENST00000522698 CCDC180Q9P1Z9 1646 aa29.42■■■□□ 2.3
EXTL3-211ENST00000522698 RB1CC1Q8TDY2 1594 aa28.1■■■□□ 2.09
EXTL3-211ENST00000522698 DNAJC5BQ9UF47 199 aa27.98■■■□□ 2.07
EXTL3-211ENST00000522698 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
EXTL3-211ENST00000522698 NACADO15069 1562 aa27.82■■■□□ 2.04
EXTL3-211ENST00000522698 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
EXTL3-211ENST00000522698 DCAF1Q9Y4B6 1507 aa27.6■■■□□ 2.01
EXTL3-211ENST00000522698 PABPN1Q86U42 306 aaKnown RBP eCLIP27.55■■■□□ 2
EXTL3-211ENST00000522698 MYO15BQ96JP2 1530 aa27.51■■■□□ 2
EXTL3-211ENST00000522698 UNC13AQ9UPW8 1703 aa27.47■■□□□ 1.99
EXTL3-211ENST00000522698 BICRAQ9NZM4 1560 aa27.28■■□□□ 1.96
EXTL3-211ENST00000522698 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
EXTL3-211ENST00000522698 SCRIBQ14160 1630 aa26.87■■□□□ 1.89
EXTL3-211ENST00000522698 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
EXTL3-211ENST00000522698 CECR2Q9BXF3 1484 aa26.72■■□□□ 1.87
EXTL3-211ENST00000522698 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
EXTL3-211ENST00000522698 DNAJC5Q9H3Z4 198 aa26.01■■□□□ 1.75
EXTL3-211ENST00000522698 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.71
EXTL3-211ENST00000522698 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
EXTL3-211ENST00000522698 CUX2O14529 1486 aa25.72■■□□□ 1.71
EXTL3-211ENST00000522698 NCAPD3P42695 1498 aa25.69■■□□□ 1.7
EXTL3-211ENST00000522698 MROH2BQ7Z745 1585 aa25.66■■□□□ 1.7
EXTL3-211ENST00000522698 ATAD2BQ9ULI0 1458 aa25.63■■□□□ 1.69
EXTL3-211ENST00000522698 ERCC6Q03468 1493 aa25.61■■□□□ 1.69
EXTL3-211ENST00000522698 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
EXTL3-211ENST00000522698 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
EXTL3-211ENST00000522698 HMGXB3Q12766 1538 aa25.51■■□□□ 1.67
EXTL3-211ENST00000522698 PEG3Q9GZU2 1588 aa25.51■■□□□ 1.67
EXTL3-211ENST00000522698 WIZO95785 1651 aa25.44■■□□□ 1.66
EXTL3-211ENST00000522698 NESP48681 1621 aa25.41■■□□□ 1.66
EXTL3-211ENST00000522698 BAZ1BQ9UIG0 1483 aaKnown RBP25.39■■□□□ 1.65
EXTL3-211ENST00000522698 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
EXTL3-211ENST00000522698 TOP2AP11388 1531 aaKnown RBP25.19■■□□□ 1.62
EXTL3-211ENST00000522698 SUPT5HO00267 1087 aaKnown RBP25.18■■□□□ 1.62
EXTL3-211ENST00000522698 LAMC3Q9Y6N6 1575 aa25.17■■□□□ 1.62
EXTL3-211ENST00000522698 KIF21AQ7Z4S6 1674 aa25.05■■□□□ 1.6
EXTL3-211ENST00000522698 PDS5BQ9NTI5 1447 aa25.01■■□□□ 1.59
EXTL3-211ENST00000522698 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
EXTL3-211ENST00000522698 CCDC88BA6NC98 1476 aa24.85■■□□□ 1.57
EXTL3-211ENST00000522698 MRC2Q9UBG0 1479 aa24.83■■□□□ 1.57
EXTL3-211ENST00000522698 WDR62O43379 1518 aa24.77■■□□□ 1.56
EXTL3-211ENST00000522698 TRIM41Q8WV44 630 aa24.7■■□□□ 1.54
EXTL3-211ENST00000522698 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.54
EXTL3-211ENST00000522698 FANCD2Q9BXW9 1451 aa24.67■■□□□ 1.54
EXTL3-211ENST00000522698 CFTRP13569 1480 aa24.61■■□□□ 1.53
EXTL3-211ENST00000522698 PRDM2Q13029 1718 aa24.58■■□□□ 1.53
EXTL3-211ENST00000522698 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
EXTL3-211ENST00000522698 OSCARQ8IYS5 282 aa24.42■■□□□ 1.5
EXTL3-211ENST00000522698 ZNF608Q9ULD9 1512 aaPredicted RBP24.22■■□□□ 1.47
EXTL3-211ENST00000522698 IFT140Q96RY7 1462 aa24.2■■□□□ 1.47
EXTL3-211ENST00000522698 RIMBP3CA6NJZ7 1639 aa24.18■■□□□ 1.46
EXTL3-211ENST00000522698 RIMBP3BA6NNM3 1639 aa24.18■■□□□ 1.46
EXTL3-211ENST00000522698 RIMBP3Q9UFD9 1639 aa24.18■■□□□ 1.46
EXTL3-211ENST00000522698 TOPBP1Q92547 1522 aa24.18■■□□□ 1.46
EXTL3-211ENST00000522698 ABCC8Q09428 1581 aa24.13■■□□□ 1.45
EXTL3-211ENST00000522698 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.44
EXTL3-211ENST00000522698 DNMBPQ6XZF7 1577 aa24.08■■□□□ 1.44
EXTL3-211ENST00000522698 ARHGEF11O15085 1522 aa24.06■■□□□ 1.44
EXTL3-211ENST00000522698 CUX1P39880 1505 aa24.05■■□□□ 1.44
EXTL3-211ENST00000522698 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
EXTL3-211ENST00000522698 BIVM-ERCC5R4GMW8 1640 aa24.02■■□□□ 1.44
EXTL3-211ENST00000522698 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
EXTL3-211ENST00000522698 TOP2BQ02880 1626 aa24■■□□□ 1.43
EXTL3-211ENST00000522698 TARBP1Q13395 1621 aaKnown RBP23.96■■□□□ 1.43
EXTL3-211ENST00000522698 AQRO60306 1485 aaKnown RBP eCLIP23.95■■□□□ 1.42
EXTL3-211ENST00000522698 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
EXTL3-211ENST00000522698 CHD1O14646 1710 aa23.93■■□□□ 1.42
EXTL3-211ENST00000522698 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
EXTL3-211ENST00000522698 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
EXTL3-211ENST00000522698 FGD5Q6ZNL6 1462 aa23.86■■□□□ 1.41
EXTL3-211ENST00000522698 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
EXTL3-211ENST00000522698 FBLN2P98095 1184 aa23.82■■□□□ 1.4
EXTL3-211ENST00000522698 TDRD9Q8NDG6 1382 aaKnown RBP23.79■■□□□ 1.4
EXTL3-211ENST00000522698 SOGA1O94964 1423 aa23.79■■□□□ 1.4
EXTL3-211ENST00000522698 ARAP1Q96P48 1450 aa23.79■■□□□ 1.4
EXTL3-211ENST00000522698 WDR97A6NE52 1622 aa23.74■■□□□ 1.39
EXTL3-211ENST00000522698 SNAPC4Q5SXM2 1469 aa23.74■■□□□ 1.39
EXTL3-211ENST00000522698 TRHP20396 242 aaPredicted RBP23.7■■□□□ 1.38
EXTL3-211ENST00000522698 ABCA10Q8WWZ4 1543 aa23.67■■□□□ 1.38
EXTL3-211ENST00000522698 CLASP1Q7Z460 1538 aa23.64■■□□□ 1.37
EXTL3-211ENST00000522698 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
EXTL3-211ENST00000522698 GRIN2BQ13224 1484 aa23.61■■□□□ 1.37
EXTL3-211ENST00000522698 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
EXTL3-211ENST00000522698 ABCA5Q8WWZ7 1642 aa23.57■■□□□ 1.36
EXTL3-211ENST00000522698 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
EXTL3-211ENST00000522698 PBRM1Q86U86 1689 aa23.51■■□□□ 1.35
EXTL3-211ENST00000522698 GAPVD1Q14C86 1478 aa23.51■■□□□ 1.35
EXTL3-211ENST00000522698 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
EXTL3-211ENST00000522698 RUSC2Q8N2Y8 1516 aa23.47■■□□□ 1.35
EXTL3-211ENST00000522698 EEA1Q15075 1411 aa23.42■■□□□ 1.34
EXTL3-211ENST00000522698 ERICH3Q5RHP9 1530 aa23.4■■□□□ 1.34
EXTL3-211ENST00000522698 IGF1RP08069 1367 aa23.33■■□□□ 1.33
EXTL3-211ENST00000522698 GRIN2AQ12879 1464 aa23.32■■□□□ 1.32
EXTL3-211ENST00000522698 CUL7Q14999 1698 aa23.32■■□□□ 1.32
EXTL3-211ENST00000522698 ADAMTS12P58397 1594 aa23.31■■□□□ 1.32
EXTL3-211ENST00000522698 ERCC6L2Q5T890 1561 aa23.29■■□□□ 1.32
EXTL3-211ENST00000522698 AEBP2Q6ZN18 517 aaPredicted RBP23.29■■□□□ 1.32
EXTL3-211ENST00000522698 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms