RNA–Protein interactions for RNA: ENST00000522688.5

ITGB2-219, Transcript of integrin subunit beta 2, humanhuman

TSL 4

Gene ITGB2, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB2-219ENST00000522688 NISCHQ9Y2I1 1504 aa37.57■■■■□ 3.61
ITGB2-219ENST00000522688 CCDC180Q9P1Z9 1646 aa33.8■■■■□ 3
ITGB2-219ENST00000522688 ABCC9O60706 1549 aa33.78■■■■□ 3
ITGB2-219ENST00000522688 RB1CC1Q8TDY2 1594 aa32.15■■■□□ 2.74
ITGB2-219ENST00000522688 NACADO15069 1562 aa31.9■■■□□ 2.7
ITGB2-219ENST00000522688 DCAF8L2P0C7V8 631 aa31.7■■■□□ 2.67
ITGB2-219ENST00000522688 DNAJC5BQ9UF47 199 aa31.6■■■□□ 2.65
ITGB2-219ENST00000522688 UNC13AQ9UPW8 1703 aa31.48■■■□□ 2.63
ITGB2-219ENST00000522688 MYO15BQ96JP2 1530 aa31.42■■■□□ 2.62
ITGB2-219ENST00000522688 PABPN1Q86U42 306 aaKnown RBP eCLIP31.39■■■□□ 2.62
ITGB2-219ENST00000522688 BICRAQ9NZM4 1560 aa31.2■■■□□ 2.58
ITGB2-219ENST00000522688 ZCCHC6Q5VYS8 1495 aaKnown RBP31.15■■■□□ 2.58
ITGB2-219ENST00000522688 DCAF1Q9Y4B6 1507 aa31.02■■■□□ 2.56
ITGB2-219ENST00000522688 SCRIBQ14160 1630 aa30.8■■■□□ 2.52
ITGB2-219ENST00000522688 SHROOM4Q9ULL8 1493 aa30.77■■■□□ 2.52
ITGB2-219ENST00000522688 CC2D2AQ9P2K1 1620 aa30.52■■■□□ 2.48
ITGB2-219ENST00000522688 EIF4G1Q04637 1599 aaKnown RBP30.45■■■□□ 2.47
ITGB2-219ENST00000522688 CECR2Q9BXF3 1484 aa30.42■■■□□ 2.46
ITGB2-219ENST00000522688 NCAPD3P42695 1498 aa29.41■■■□□ 2.3
ITGB2-219ENST00000522688 SMARCA4P51532 1647 aa29.36■■■□□ 2.29
ITGB2-219ENST00000522688 ATAD2BQ9ULI0 1458 aa29.34■■■□□ 2.29
ITGB2-219ENST00000522688 SMARCA2P51531 1590 aa29.3■■■□□ 2.28
ITGB2-219ENST00000522688 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
ITGB2-219ENST00000522688 BAZ1AQ9NRL2 1556 aaPredicted RBP29.19■■■□□ 2.26
ITGB2-219ENST00000522688 ERCC6Q03468 1493 aa29.19■■■□□ 2.26
ITGB2-219ENST00000522688 CUX2O14529 1486 aa29.1■■■□□ 2.25
ITGB2-219ENST00000522688 BAZ1BQ9UIG0 1483 aaKnown RBP29.1■■■□□ 2.25
ITGB2-219ENST00000522688 DNAJC5Q9H3Z4 198 aa29.04■■■□□ 2.24
ITGB2-219ENST00000522688 PEG3Q9GZU2 1588 aa29.04■■■□□ 2.24
ITGB2-219ENST00000522688 NESP48681 1621 aa29■■■□□ 2.23
ITGB2-219ENST00000522688 MROH2BQ7Z745 1585 aa28.96■■■□□ 2.23
ITGB2-219ENST00000522688 LAMC3Q9Y6N6 1575 aa28.81■■■□□ 2.2
ITGB2-219ENST00000522688 THOC2Q8NI27 1593 aaKnown RBP28.75■■■□□ 2.19
ITGB2-219ENST00000522688 KIF21AQ7Z4S6 1674 aa28.7■■■□□ 2.18
ITGB2-219ENST00000522688 WIZO95785 1651 aa28.64■■■□□ 2.18
ITGB2-219ENST00000522688 PDS5BQ9NTI5 1447 aa28.61■■■□□ 2.17
ITGB2-219ENST00000522688 CADPSQ9ULU8 1353 aa28.51■■■□□ 2.16
ITGB2-219ENST00000522688 MRC2Q9UBG0 1479 aa28.4■■■□□ 2.14
ITGB2-219ENST00000522688 WDR62O43379 1518 aa28.33■■■□□ 2.13
ITGB2-219ENST00000522688 RSF1Q96T23 1441 aaPredicted RBP28.32■■■□□ 2.12
ITGB2-219ENST00000522688 CEP164Q9UPV0 1460 aa28.28■■■□□ 2.12
ITGB2-219ENST00000522688 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
ITGB2-219ENST00000522688 FANCD2Q9BXW9 1451 aa28.23■■■□□ 2.11
ITGB2-219ENST00000522688 CFTRP13569 1480 aa28.2■■■□□ 2.1
ITGB2-219ENST00000522688 PRDM2Q13029 1718 aa28.04■■■□□ 2.08
ITGB2-219ENST00000522688 URB2Q14146 1524 aaKnown RBP28.01■■■□□ 2.07
ITGB2-219ENST00000522688 CCDC88BA6NC98 1476 aa27.91■■■□□ 2.06
ITGB2-219ENST00000522688 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
ITGB2-219ENST00000522688 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
ITGB2-219ENST00000522688 TOPBP1Q92547 1522 aa27.7■■■□□ 2.02
ITGB2-219ENST00000522688 IFT140Q96RY7 1462 aa27.7■■■□□ 2.02
ITGB2-219ENST00000522688 ZNF608Q9ULD9 1512 aaPredicted RBP27.66■■■□□ 2.02
ITGB2-219ENST00000522688 DNMBPQ6XZF7 1577 aa27.63■■■□□ 2.01
ITGB2-219ENST00000522688 ABCC8Q09428 1581 aa27.62■■■□□ 2.01
ITGB2-219ENST00000522688 EIF4G3O43432 1585 aaKnown RBP27.57■■■□□ 2
ITGB2-219ENST00000522688 TARBP1Q13395 1621 aaKnown RBP27.48■■□□□ 1.99
ITGB2-219ENST00000522688 RIMBP3CA6NJZ7 1639 aa27.46■■□□□ 1.99
ITGB2-219ENST00000522688 RIMBP3BA6NNM3 1639 aa27.46■■□□□ 1.99
ITGB2-219ENST00000522688 RIMBP3Q9UFD9 1639 aa27.46■■□□□ 1.99
ITGB2-219ENST00000522688 POLA1P09884 1462 aaPredicted RBP27.42■■□□□ 1.98
ITGB2-219ENST00000522688 AQRO60306 1485 aaKnown RBP eCLIP27.39■■□□□ 1.98
ITGB2-219ENST00000522688 CHD1O14646 1710 aa27.39■■□□□ 1.98
ITGB2-219ENST00000522688 ARHGEF11O15085 1522 aa27.35■■□□□ 1.97
ITGB2-219ENST00000522688 RAD54L2Q9Y4B4 1467 aa27.31■■□□□ 1.96
ITGB2-219ENST00000522688 FGD5Q6ZNL6 1462 aa27.25■■□□□ 1.95
ITGB2-219ENST00000522688 SOGA1O94964 1423 aa27.25■■□□□ 1.95
ITGB2-219ENST00000522688 FBLN2P98095 1184 aa27.23■■□□□ 1.95
ITGB2-219ENST00000522688 CUX1P39880 1505 aa27.22■■□□□ 1.95
ITGB2-219ENST00000522688 TDRD9Q8NDG6 1382 aaKnown RBP27.21■■□□□ 1.95
ITGB2-219ENST00000522688 WDR97A6NE52 1622 aa27.2■■□□□ 1.95
ITGB2-219ENST00000522688 SNAPC4Q5SXM2 1469 aa27.15■■□□□ 1.94
ITGB2-219ENST00000522688 CYB5RLQ6IPT4 315 aa27.09■■□□□ 1.93
ITGB2-219ENST00000522688 ARAP1Q96P48 1450 aa27.06■■□□□ 1.92
ITGB2-219ENST00000522688 MAGI1Q96QZ7 1491 aaPredicted RBP27.06■■□□□ 1.92
ITGB2-219ENST00000522688 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
ITGB2-219ENST00000522688 GRIN2BQ13224 1484 aa27.06■■□□□ 1.92
ITGB2-219ENST00000522688 PBRM1Q86U86 1689 aa27.03■■□□□ 1.92
ITGB2-219ENST00000522688 SYNJ1O43426 1573 aa27.02■■□□□ 1.92
ITGB2-219ENST00000522688 CLASP1Q7Z460 1538 aa27.01■■□□□ 1.91
ITGB2-219ENST00000522688 CHMP7Q8WUX9 453 aaPredicted RBP27■■□□□ 1.91
ITGB2-219ENST00000522688 SYNJ2O15056 1496 aa26.97■■□□□ 1.91
ITGB2-219ENST00000522688 GAPVD1Q14C86 1478 aa26.95■■□□□ 1.91
ITGB2-219ENST00000522688 ABCA5Q8WWZ7 1642 aa26.93■■□□□ 1.9
ITGB2-219ENST00000522688 ABCA10Q8WWZ4 1543 aa26.92■■□□□ 1.9
ITGB2-219ENST00000522688 TRHP20396 242 aaPredicted RBP26.83■■□□□ 1.89
ITGB2-219ENST00000522688 BIVM-ERCC5R4GMW8 1640 aa26.81■■□□□ 1.88
ITGB2-219ENST00000522688 WRNQ14191 1432 aaPredicted RBP eCLIP26.8■■□□□ 1.88
ITGB2-219ENST00000522688 TOP2BQ02880 1626 aa26.79■■□□□ 1.88
ITGB2-219ENST00000522688 ADAMTS12P58397 1594 aa26.75■■□□□ 1.87
ITGB2-219ENST00000522688 GRIN2AQ12879 1464 aa26.72■■□□□ 1.87
ITGB2-219ENST00000522688 CEP170Q5SW79 1584 aa26.64■■□□□ 1.86
ITGB2-219ENST00000522688 ERCC6L2Q5T890 1561 aa26.6■■□□□ 1.85
ITGB2-219ENST00000522688 FHAD1B1AJZ9 1412 aa26.6■■□□□ 1.85
ITGB2-219ENST00000522688 NUP160Q12769 1436 aa26.6■■□□□ 1.85
ITGB2-219ENST00000522688 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
ITGB2-219ENST00000522688 SHROOM2Q13796 1616 aa26.53■■□□□ 1.84
ITGB2-219ENST00000522688 RUSC2Q8N2Y8 1516 aa26.38■■□□□ 1.81
ITGB2-219ENST00000522688 PRG4Q92954 1404 aaPredicted RBP26.35■■□□□ 1.81
ITGB2-219ENST00000522688 JPH4Q96JJ6 628 aa26.27■■□□□ 1.8
ITGB2-219ENST00000522688 CUL7Q14999 1698 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms