RNA–Protein interactions for RNA: ENST00000522638.1

IGKV3D-34-201, Transcript of immunoglobulin kappa variable 3D-34 (pseudogene), humanhuman

BASIC

Gene IGKV3D-34, Length 302 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-34-201ENST00000522638 NISCHQ9Y2I1 1504 aa15.94■□□□□ 0.14
IGKV3D-34-201ENST00000522638 ABCC9O60706 1549 aa15.12■□□□□ 0.01
IGKV3D-34-201ENST00000522638 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
IGKV3D-34-201ENST00000522638 CCDC180Q9P1Z9 1646 aa14.68□□□□□ -0.06
IGKV3D-34-201ENST00000522638 RB1CC1Q8TDY2 1594 aa14.17□□□□□ -0.14
IGKV3D-34-201ENST00000522638 UNC13AQ9UPW8 1703 aa14.04□□□□□ -0.16
IGKV3D-34-201ENST00000522638 NACADO15069 1562 aa13.93□□□□□ -0.18
IGKV3D-34-201ENST00000522638 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
IGKV3D-34-201ENST00000522638 PABPN1Q86U42 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
IGKV3D-34-201ENST00000522638 BICRAQ9NZM4 1560 aa13.87□□□□□ -0.19
IGKV3D-34-201ENST00000522638 CC2D2AQ9P2K1 1620 aa13.71□□□□□ -0.22
IGKV3D-34-201ENST00000522638 CECR2Q9BXF3 1484 aa13.68□□□□□ -0.22
IGKV3D-34-201ENST00000522638 SHROOM4Q9ULL8 1493 aa13.56□□□□□ -0.24
IGKV3D-34-201ENST00000522638 MYO15BQ96JP2 1530 aa13.56□□□□□ -0.24
IGKV3D-34-201ENST00000522638 EIF4G1Q04637 1599 aaKnown RBP13.53□□□□□ -0.24
IGKV3D-34-201ENST00000522638 DCAF8L2P0C7V8 631 aa13.45□□□□□ -0.26
IGKV3D-34-201ENST00000522638 CUX2O14529 1486 aa13.32□□□□□ -0.28
IGKV3D-34-201ENST00000522638 SCRIBQ14160 1630 aa13.25□□□□□ -0.29
IGKV3D-34-201ENST00000522638 DCAF1Q9Y4B6 1507 aa13.17□□□□□ -0.3
IGKV3D-34-201ENST00000522638 ZCCHC6Q5VYS8 1495 aaKnown RBP13.1□□□□□ -0.31
IGKV3D-34-201ENST00000522638 ERCC6Q03468 1493 aa13.05□□□□□ -0.32
IGKV3D-34-201ENST00000522638 TRIM41Q8WV44 630 aa12.99□□□□□ -0.33
IGKV3D-34-201ENST00000522638 THOC2Q8NI27 1593 aaKnown RBP12.94□□□□□ -0.34
IGKV3D-34-201ENST00000522638 NESP48681 1621 aa12.85□□□□□ -0.35
IGKV3D-34-201ENST00000522638 NCAPD3P42695 1498 aa12.84□□□□□ -0.35
IGKV3D-34-201ENST00000522638 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.37
IGKV3D-34-201ENST00000522638 HMGXB3Q12766 1538 aa12.75□□□□□ -0.37
IGKV3D-34-201ENST00000522638 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
IGKV3D-34-201ENST00000522638 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
IGKV3D-34-201ENST00000522638 BAZ1AQ9NRL2 1556 aaPredicted RBP12.69□□□□□ -0.38
IGKV3D-34-201ENST00000522638 LAMC3Q9Y6N6 1575 aa12.69□□□□□ -0.38
IGKV3D-34-201ENST00000522638 SMARCA4P51532 1647 aa12.61□□□□□ -0.39
IGKV3D-34-201ENST00000522638 WDR62O43379 1518 aa12.57□□□□□ -0.4
IGKV3D-34-201ENST00000522638 RIMBP3CA6NJZ7 1639 aa12.57□□□□□ -0.4
IGKV3D-34-201ENST00000522638 RIMBP3BA6NNM3 1639 aa12.57□□□□□ -0.4
IGKV3D-34-201ENST00000522638 RIMBP3Q9UFD9 1639 aa12.57□□□□□ -0.4
IGKV3D-34-201ENST00000522638 PDS5BQ9NTI5 1447 aa12.54□□□□□ -0.4
IGKV3D-34-201ENST00000522638 BAZ1BQ9UIG0 1483 aaKnown RBP12.53□□□□□ -0.4
IGKV3D-34-201ENST00000522638 MRC2Q9UBG0 1479 aa12.53□□□□□ -0.4
IGKV3D-34-201ENST00000522638 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.41
IGKV3D-34-201ENST00000522638 OSCARQ8IYS5 282 aa12.46□□□□□ -0.41
IGKV3D-34-201ENST00000522638 ARHGEF11O15085 1522 aa12.42□□□□□ -0.42
IGKV3D-34-201ENST00000522638 CADPSQ9ULU8 1353 aa12.37□□□□□ -0.43
IGKV3D-34-201ENST00000522638 CEP164Q9UPV0 1460 aa12.34□□□□□ -0.43
IGKV3D-34-201ENST00000522638 AEBP2Q6ZN18 517 aaPredicted RBP12.31□□□□□ -0.44
IGKV3D-34-201ENST00000522638 MROH2BQ7Z745 1585 aa12.27□□□□□ -0.44
IGKV3D-34-201ENST00000522638 ARAP1Q96P48 1450 aa12.27□□□□□ -0.45
IGKV3D-34-201ENST00000522638 FANCD2Q9BXW9 1451 aa12.26□□□□□ -0.45
IGKV3D-34-201ENST00000522638 URB2Q14146 1524 aaKnown RBP12.25□□□□□ -0.45
IGKV3D-34-201ENST00000522638 TRHP20396 242 aaPredicted RBP12.23□□□□□ -0.45
IGKV3D-34-201ENST00000522638 CHD1O14646 1710 aa12.21□□□□□ -0.45
IGKV3D-34-201ENST00000522638 CYB5RLQ6IPT4 315 aa12.21□□□□□ -0.45
IGKV3D-34-201ENST00000522638 ZNF608Q9ULD9 1512 aaPredicted RBP12.18□□□□□ -0.46
IGKV3D-34-201ENST00000522638 PRDM2Q13029 1718 aa12.16□□□□□ -0.46
IGKV3D-34-201ENST00000522638 CFTRP13569 1480 aa12.15□□□□□ -0.46
IGKV3D-34-201ENST00000522638 EIF4G3O43432 1585 aaKnown RBP12.14□□□□□ -0.47
IGKV3D-34-201ENST00000522638 WIZO95785 1651 aa12.13□□□□□ -0.47
IGKV3D-34-201ENST00000522638 RSF1Q96T23 1441 aaPredicted RBP12.12□□□□□ -0.47
IGKV3D-34-201ENST00000522638 IFT140Q96RY7 1462 aa12.11□□□□□ -0.47
IGKV3D-34-201ENST00000522638 CLASP1Q7Z460 1538 aa12.02□□□□□ -0.48
IGKV3D-34-201ENST00000522638 TARBP1Q13395 1621 aaKnown RBP12□□□□□ -0.49
IGKV3D-34-201ENST00000522638 ILDR1Q86SU0 546 aaPredicted RBP11.99□□□□□ -0.49
IGKV3D-34-201ENST00000522638 TOPBP1Q92547 1522 aa11.99□□□□□ -0.49
IGKV3D-34-201ENST00000522638 AQRO60306 1485 aaKnown RBP eCLIP11.94□□□□□ -0.5
IGKV3D-34-201ENST00000522638 DNMBPQ6XZF7 1577 aa11.92□□□□□ -0.5
IGKV3D-34-201ENST00000522638 TOP2AP11388 1531 aaKnown RBP11.91□□□□□ -0.5
IGKV3D-34-201ENST00000522638 KIF13AQ9H1H9 1805 aa11.91□□□□□ -0.5
IGKV3D-34-201ENST00000522638 SYNJ1O43426 1573 aa11.89□□□□□ -0.51
IGKV3D-34-201ENST00000522638 ABCC8Q09428 1581 aa11.88□□□□□ -0.51
IGKV3D-34-201ENST00000522638 GAPVD1Q14C86 1478 aa11.84□□□□□ -0.51
IGKV3D-34-201ENST00000522638 FBLN2P98095 1184 aa11.84□□□□□ -0.51
IGKV3D-34-201ENST00000522638 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
IGKV3D-34-201ENST00000522638 POLA1P09884 1462 aaPredicted RBP11.83□□□□□ -0.52
IGKV3D-34-201ENST00000522638 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
IGKV3D-34-201ENST00000522638 MAGI1Q96QZ7 1491 aaPredicted RBP11.78□□□□□ -0.52
IGKV3D-34-201ENST00000522638 ERCC6L2Q5T890 1561 aa11.77□□□□□ -0.53
IGKV3D-34-201ENST00000522638 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
IGKV3D-34-201ENST00000522638 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
IGKV3D-34-201ENST00000522638 KDM4FA0A1W2PPD8 638 aa11.74□□□□□ -0.53
IGKV3D-34-201ENST00000522638 SYNJ2O15056 1496 aa11.74□□□□□ -0.53
IGKV3D-34-201ENST00000522638 CCDC88BA6NC98 1476 aa11.73□□□□□ -0.53
IGKV3D-34-201ENST00000522638 TDRD9Q8NDG6 1382 aaKnown RBP11.73□□□□□ -0.53
IGKV3D-34-201ENST00000522638 GRIN2BQ13224 1484 aa11.69□□□□□ -0.54
IGKV3D-34-201ENST00000522638 CHMP7Q8WUX9 453 aaPredicted RBP11.68□□□□□ -0.54
IGKV3D-34-201ENST00000522638 SOGA1O94964 1423 aa11.68□□□□□ -0.54
IGKV3D-34-201ENST00000522638 SHROOM2Q13796 1616 aa11.68□□□□□ -0.54
IGKV3D-34-201ENST00000522638 CEP170Q5SW79 1584 aa11.67□□□□□ -0.54
IGKV3D-34-201ENST00000522638 KDM6BO15054 1643 aa11.66□□□□□ -0.54
IGKV3D-34-201ENST00000522638 FGD5Q6ZNL6 1462 aa11.65□□□□□ -0.54
IGKV3D-34-201ENST00000522638 DIP2BQ9P265 1576 aa11.64□□□□□ -0.55
IGKV3D-34-201ENST00000522638 HECW2Q9P2P5 1572 aa11.63□□□□□ -0.55
IGKV3D-34-201ENST00000522638 ABCC10Q5T3U5 1492 aa11.62□□□□□ -0.55
IGKV3D-34-201ENST00000522638 ABCA5Q8WWZ7 1642 aa11.61□□□□□ -0.55
IGKV3D-34-201ENST00000522638 TSPOAP1O95153 1857 aa11.59□□□□□ -0.55
IGKV3D-34-201ENST00000522638 MAPKBP1O60336 1514 aa11.59□□□□□ -0.55
IGKV3D-34-201ENST00000522638 CUX1P39880 1505 aa11.58□□□□□ -0.56
IGKV3D-34-201ENST00000522638 NUP160Q12769 1436 aa11.57□□□□□ -0.56
IGKV3D-34-201ENST00000522638 GRIN2AQ12879 1464 aa11.57□□□□□ -0.56
IGKV3D-34-201ENST00000522638 ADAMTS12P58397 1594 aa11.55□□□□□ -0.56
IGKV3D-34-201ENST00000522638 ADGRL1O94910 1474 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms