RNA–Protein interactions for RNA: ENST00000522592.1

MTCL1-213, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 4

Gene MTCL1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-213ENST00000522592 NISCHQ9Y2I1 1504 aa40.52■■■■■ 4.08
MTCL1-213ENST00000522592 CCDC180Q9P1Z9 1646 aa36.23■■■■□ 3.39
MTCL1-213ENST00000522592 ABCC9O60706 1549 aa36.08■■■■□ 3.37
MTCL1-213ENST00000522592 RB1CC1Q8TDY2 1594 aa34.43■■■■□ 3.1
MTCL1-213ENST00000522592 DCAF8L2P0C7V8 631 aa34.32■■■■□ 3.08
MTCL1-213ENST00000522592 NACADO15069 1562 aa34.22■■■■□ 3.07
MTCL1-213ENST00000522592 MYO15BQ96JP2 1530 aa33.76■■■■□ 3
MTCL1-213ENST00000522592 PABPN1Q86U42 306 aaKnown RBP eCLIP33.66■■■□□ 2.98
MTCL1-213ENST00000522592 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
MTCL1-213ENST00000522592 UNC13AQ9UPW8 1703 aa33.53■■■□□ 2.96
MTCL1-213ENST00000522592 DNAJC5BQ9UF47 199 aa33.5■■■□□ 2.95
MTCL1-213ENST00000522592 DCAF1Q9Y4B6 1507 aa33.44■■■□□ 2.94
MTCL1-213ENST00000522592 BICRAQ9NZM4 1560 aa33.3■■■□□ 2.92
MTCL1-213ENST00000522592 SCRIBQ14160 1630 aa33.12■■■□□ 2.89
MTCL1-213ENST00000522592 SHROOM4Q9ULL8 1493 aa32.94■■■□□ 2.86
MTCL1-213ENST00000522592 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
MTCL1-213ENST00000522592 EIF4G1Q04637 1599 aaKnown RBP32.54■■■□□ 2.8
MTCL1-213ENST00000522592 CECR2Q9BXF3 1484 aa32.47■■■□□ 2.79
MTCL1-213ENST00000522592 NCAPD3P42695 1498 aa31.57■■■□□ 2.64
MTCL1-213ENST00000522592 SMARCA4P51532 1647 aa31.57■■■□□ 2.64
MTCL1-213ENST00000522592 ATAD2BQ9ULI0 1458 aa31.52■■■□□ 2.64
MTCL1-213ENST00000522592 SMARCA2P51531 1590 aa31.5■■■□□ 2.63
MTCL1-213ENST00000522592 BAZ1AQ9NRL2 1556 aaPredicted RBP31.47■■■□□ 2.63
MTCL1-213ENST00000522592 HMGXB3Q12766 1538 aa31.37■■■□□ 2.61
MTCL1-213ENST00000522592 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
MTCL1-213ENST00000522592 MROH2BQ7Z745 1585 aa31.23■■■□□ 2.59
MTCL1-213ENST00000522592 ERCC6Q03468 1493 aa31.21■■■□□ 2.59
MTCL1-213ENST00000522592 PEG3Q9GZU2 1588 aa31.19■■■□□ 2.58
MTCL1-213ENST00000522592 NESP48681 1621 aa31.02■■■□□ 2.56
MTCL1-213ENST00000522592 CUX2O14529 1486 aa30.96■■■□□ 2.55
MTCL1-213ENST00000522592 WIZO95785 1651 aa30.87■■■□□ 2.53
MTCL1-213ENST00000522592 LAMC3Q9Y6N6 1575 aa30.84■■■□□ 2.53
MTCL1-213ENST00000522592 PDS5BQ9NTI5 1447 aa30.72■■■□□ 2.51
MTCL1-213ENST00000522592 RSF1Q96T23 1441 aaPredicted RBP30.68■■■□□ 2.5
MTCL1-213ENST00000522592 CADPSQ9ULU8 1353 aa30.67■■■□□ 2.5
MTCL1-213ENST00000522592 DNAJC5Q9H3Z4 198 aa30.63■■■□□ 2.49
MTCL1-213ENST00000522592 THOC2Q8NI27 1593 aaKnown RBP30.62■■■□□ 2.49
MTCL1-213ENST00000522592 KIF21AQ7Z4S6 1674 aa30.62■■■□□ 2.49
MTCL1-213ENST00000522592 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
MTCL1-213ENST00000522592 MRC2Q9UBG0 1479 aa30.42■■■□□ 2.46
MTCL1-213ENST00000522592 CEP164Q9UPV0 1460 aa30.38■■■□□ 2.45
MTCL1-213ENST00000522592 CFTRP13569 1480 aa30.34■■■□□ 2.45
MTCL1-213ENST00000522592 FANCD2Q9BXW9 1451 aa30.34■■■□□ 2.45
MTCL1-213ENST00000522592 WDR62O43379 1518 aa30.28■■■□□ 2.44
MTCL1-213ENST00000522592 CCDC88BA6NC98 1476 aa30.17■■■□□ 2.42
MTCL1-213ENST00000522592 PRDM2Q13029 1718 aa30.03■■■□□ 2.4
MTCL1-213ENST00000522592 URB2Q14146 1524 aaKnown RBP30.02■■■□□ 2.4
MTCL1-213ENST00000522592 TOPBP1Q92547 1522 aa29.76■■■□□ 2.36
MTCL1-213ENST00000522592 ABCC8Q09428 1581 aa29.75■■■□□ 2.35
MTCL1-213ENST00000522592 IFT140Q96RY7 1462 aa29.74■■■□□ 2.35
MTCL1-213ENST00000522592 SUPT5HO00267 1087 aaKnown RBP29.7■■■□□ 2.35
MTCL1-213ENST00000522592 DNMBPQ6XZF7 1577 aa29.69■■■□□ 2.34
MTCL1-213ENST00000522592 OSCARQ8IYS5 282 aa29.65■■■□□ 2.34
MTCL1-213ENST00000522592 ZNF608Q9ULD9 1512 aaPredicted RBP29.63■■■□□ 2.33
MTCL1-213ENST00000522592 TRIM41Q8WV44 630 aa29.56■■■□□ 2.32
MTCL1-213ENST00000522592 EIF4G3O43432 1585 aaKnown RBP29.49■■■□□ 2.31
MTCL1-213ENST00000522592 POLA1P09884 1462 aaPredicted RBP29.48■■■□□ 2.31
MTCL1-213ENST00000522592 TARBP1Q13395 1621 aaKnown RBP29.43■■■□□ 2.3
MTCL1-213ENST00000522592 AQRO60306 1485 aaKnown RBP eCLIP29.42■■■□□ 2.3
MTCL1-213ENST00000522592 SOGA1O94964 1423 aa29.39■■■□□ 2.3
MTCL1-213ENST00000522592 RAD54L2Q9Y4B4 1467 aa29.39■■■□□ 2.3
MTCL1-213ENST00000522592 FGD5Q6ZNL6 1462 aa29.36■■■□□ 2.29
MTCL1-213ENST00000522592 CUX1P39880 1505 aa29.33■■■□□ 2.29
MTCL1-213ENST00000522592 FBLN2P98095 1184 aa29.32■■■□□ 2.28
MTCL1-213ENST00000522592 TDRD9Q8NDG6 1382 aaKnown RBP29.31■■■□□ 2.28
MTCL1-213ENST00000522592 CHD1O14646 1710 aa29.2■■■□□ 2.27
MTCL1-213ENST00000522592 WDR97A6NE52 1622 aa29.18■■■□□ 2.26
MTCL1-213ENST00000522592 RIMBP3CA6NJZ7 1639 aa29.16■■■□□ 2.26
MTCL1-213ENST00000522592 RIMBP3BA6NNM3 1639 aa29.16■■■□□ 2.26
MTCL1-213ENST00000522592 RIMBP3Q9UFD9 1639 aa29.16■■■□□ 2.26
MTCL1-213ENST00000522592 SNAPC4Q5SXM2 1469 aa29.16■■■□□ 2.26
MTCL1-213ENST00000522592 ARHGEF11O15085 1522 aa29.11■■■□□ 2.25
MTCL1-213ENST00000522592 CHMP7Q8WUX9 453 aaPredicted RBP29.11■■■□□ 2.25
MTCL1-213ENST00000522592 GRIN2BQ13224 1484 aa29.1■■■□□ 2.25
MTCL1-213ENST00000522592 MAGI1Q96QZ7 1491 aaPredicted RBP29.06■■■□□ 2.24
MTCL1-213ENST00000522592 GAPVD1Q14C86 1478 aa29.04■■■□□ 2.24
MTCL1-213ENST00000522592 WRNQ14191 1432 aaPredicted RBP eCLIP29.01■■■□□ 2.23
MTCL1-213ENST00000522592 ABCA10Q8WWZ4 1543 aa29■■■□□ 2.23
MTCL1-213ENST00000522592 PBRM1Q86U86 1689 aa28.97■■■□□ 2.23
MTCL1-213ENST00000522592 CYB5RLQ6IPT4 315 aa28.97■■■□□ 2.23
MTCL1-213ENST00000522592 SYNJ2O15056 1496 aa28.97■■■□□ 2.23
MTCL1-213ENST00000522592 SYNJ1O43426 1573 aa28.95■■■□□ 2.22
MTCL1-213ENST00000522592 TOP2BQ02880 1626 aa28.94■■■□□ 2.22
MTCL1-213ENST00000522592 ABCA5Q8WWZ7 1642 aa28.92■■■□□ 2.22
MTCL1-213ENST00000522592 BIVM-ERCC5R4GMW8 1640 aa28.91■■■□□ 2.22
MTCL1-213ENST00000522592 CLASP1Q7Z460 1538 aa28.84■■■□□ 2.21
MTCL1-213ENST00000522592 ARAP1Q96P48 1450 aa28.83■■■□□ 2.21
MTCL1-213ENST00000522592 GRIN2AQ12879 1464 aa28.72■■■□□ 2.19
MTCL1-213ENST00000522592 ADAMTS12P58397 1594 aa28.71■■■□□ 2.19
MTCL1-213ENST00000522592 FHAD1B1AJZ9 1412 aa28.68■■■□□ 2.18
MTCL1-213ENST00000522592 ERICH3Q5RHP9 1530 aa28.65■■■□□ 2.18
MTCL1-213ENST00000522592 TRHP20396 242 aaPredicted RBP28.64■■■□□ 2.18
MTCL1-213ENST00000522592 NUP160Q12769 1436 aa28.57■■■□□ 2.16
MTCL1-213ENST00000522592 CEP170Q5SW79 1584 aa28.57■■■□□ 2.16
MTCL1-213ENST00000522592 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
MTCL1-213ENST00000522592 ERCC6L2Q5T890 1561 aa28.43■■■□□ 2.14
MTCL1-213ENST00000522592 SHROOM2Q13796 1616 aa28.37■■■□□ 2.13
MTCL1-213ENST00000522592 PRG4Q92954 1404 aaPredicted RBP28.35■■■□□ 2.13
MTCL1-213ENST00000522592 JPH4Q96JJ6 628 aa28.34■■■□□ 2.13
MTCL1-213ENST00000522592 IGF1RP08069 1367 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms