RNA–Protein interactions for RNA: ENST00000522546.1

COL22A1-207, Transcript of collagen type XXII alpha 1 chain, humanhuman

TSL 3

Gene COL22A1, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-207ENST00000522546 NISCHQ9Y2I1 1504 aa55.7■■■■■ 6.51
COL22A1-207ENST00000522546 CCDC180Q9P1Z9 1646 aa49.95■■■■■ 5.59
COL22A1-207ENST00000522546 ABCC9O60706 1549 aa49.51■■■■■ 5.52
COL22A1-207ENST00000522546 RB1CC1Q8TDY2 1594 aa47.29■■■■■ 5.16
COL22A1-207ENST00000522546 NACADO15069 1562 aa47■■■■■ 5.11
COL22A1-207ENST00000522546 DCAF8L2P0C7V8 631 aa46.9■■■■■ 5.1
COL22A1-207ENST00000522546 UNC13AQ9UPW8 1703 aa46.42■■■■■ 5.02
COL22A1-207ENST00000522546 MYO15BQ96JP2 1530 aa46.37■■■■■ 5.01
COL22A1-207ENST00000522546 ZCCHC6Q5VYS8 1495 aaKnown RBP46.29■■■■■ 5
COL22A1-207ENST00000522546 PABPN1Q86U42 306 aaKnown RBP eCLIP46.07■■■■■ 4.97
COL22A1-207ENST00000522546 DCAF1Q9Y4B6 1507 aa45.97■■■■■ 4.95
COL22A1-207ENST00000522546 BICRAQ9NZM4 1560 aa45.86■■■■■ 4.93
COL22A1-207ENST00000522546 DNAJC5BQ9UF47 199 aa45.85■■■■■ 4.93
COL22A1-207ENST00000522546 SCRIBQ14160 1630 aa45.63■■■■■ 4.89
COL22A1-207ENST00000522546 SHROOM4Q9ULL8 1493 aa45.2■■■■■ 4.83
COL22A1-207ENST00000522546 CC2D2AQ9P2K1 1620 aa44.76■■■■■ 4.76
COL22A1-207ENST00000522546 EIF4G1Q04637 1599 aaKnown RBP44.73■■■■■ 4.75
COL22A1-207ENST00000522546 CECR2Q9BXF3 1484 aa44.5■■■■■ 4.71
COL22A1-207ENST00000522546 SMARCA4P51532 1647 aa43.48■■■■■ 4.55
COL22A1-207ENST00000522546 ATAD2BQ9ULI0 1458 aa43.28■■■■■ 4.52
COL22A1-207ENST00000522546 NCAPD3P42695 1498 aa43.27■■■■■ 4.52
COL22A1-207ENST00000522546 BAZ1AQ9NRL2 1556 aaPredicted RBP43.27■■■■■ 4.52
COL22A1-207ENST00000522546 SMARCA2P51531 1590 aa43.25■■■■■ 4.51
COL22A1-207ENST00000522546 HMGXB3Q12766 1538 aa43.13■■■■■ 4.5
COL22A1-207ENST00000522546 BAZ1BQ9UIG0 1483 aaKnown RBP42.99■■■■■ 4.47
COL22A1-207ENST00000522546 MROH2BQ7Z745 1585 aa42.97■■■■■ 4.47
COL22A1-207ENST00000522546 PEG3Q9GZU2 1588 aa42.93■■■■■ 4.46
COL22A1-207ENST00000522546 ERCC6Q03468 1493 aa42.74■■■■■ 4.43
COL22A1-207ENST00000522546 NESP48681 1621 aa42.64■■■■■ 4.42
COL22A1-207ENST00000522546 WIZO95785 1651 aa42.6■■■■■ 4.41
COL22A1-207ENST00000522546 CUX2O14529 1486 aa42.41■■■■■ 4.38
COL22A1-207ENST00000522546 LAMC3Q9Y6N6 1575 aa42.39■■■■■ 4.38
COL22A1-207ENST00000522546 KIF21AQ7Z4S6 1674 aa42.26■■■■■ 4.36
COL22A1-207ENST00000522546 THOC2Q8NI27 1593 aaKnown RBP42.18■■■■■ 4.34
COL22A1-207ENST00000522546 RSF1Q96T23 1441 aaPredicted RBP42.14■■■■■ 4.34
COL22A1-207ENST00000522546 PDS5BQ9NTI5 1447 aa42.04■■■■■ 4.32
COL22A1-207ENST00000522546 TOP2AP11388 1531 aaKnown RBP42.01■■■■■ 4.32
COL22A1-207ENST00000522546 CADPSQ9ULU8 1353 aa42.01■■■■■ 4.31
COL22A1-207ENST00000522546 DNAJC5Q9H3Z4 198 aa41.76■■■■■ 4.28
COL22A1-207ENST00000522546 MRC2Q9UBG0 1479 aa41.74■■■■■ 4.27
COL22A1-207ENST00000522546 CEP164Q9UPV0 1460 aa41.69■■■■■ 4.26
COL22A1-207ENST00000522546 CFTRP13569 1480 aa41.64■■■■■ 4.26
COL22A1-207ENST00000522546 FANCD2Q9BXW9 1451 aa41.64■■■■■ 4.26
COL22A1-207ENST00000522546 WDR62O43379 1518 aa41.63■■■■■ 4.25
COL22A1-207ENST00000522546 PRDM2Q13029 1718 aa41.6■■■■■ 4.25
COL22A1-207ENST00000522546 CCDC88BA6NC98 1476 aa41.45■■■■■ 4.23
COL22A1-207ENST00000522546 URB2Q14146 1524 aaKnown RBP41.28■■■■■ 4.2
COL22A1-207ENST00000522546 TOPBP1Q92547 1522 aa40.91■■■■■ 4.14
COL22A1-207ENST00000522546 DNMBPQ6XZF7 1577 aa40.84■■■■■ 4.13
COL22A1-207ENST00000522546 IFT140Q96RY7 1462 aa40.77■■■■■ 4.12
COL22A1-207ENST00000522546 ABCC8Q09428 1581 aa40.76■■■■■ 4.12
COL22A1-207ENST00000522546 SUPT5HO00267 1087 aaKnown RBP40.71■■■■■ 4.11
COL22A1-207ENST00000522546 ZNF608Q9ULD9 1512 aaPredicted RBP40.7■■■■■ 4.11
COL22A1-207ENST00000522546 EIF4G3O43432 1585 aaKnown RBP40.63■■■■■ 4.09
COL22A1-207ENST00000522546 TARBP1Q13395 1621 aaKnown RBP40.53■■■■■ 4.08
COL22A1-207ENST00000522546 POLA1P09884 1462 aaPredicted RBP40.51■■■■■ 4.07
COL22A1-207ENST00000522546 OSCARQ8IYS5 282 aa40.45■■■■■ 4.07
COL22A1-207ENST00000522546 RAD54L2Q9Y4B4 1467 aa40.37■■■■■ 4.05
COL22A1-207ENST00000522546 CUX1P39880 1505 aa40.37■■■■■ 4.05
COL22A1-207ENST00000522546 FGD5Q6ZNL6 1462 aa40.36■■■■■ 4.05
COL22A1-207ENST00000522546 AQRO60306 1485 aaKnown RBP eCLIP40.35■■■■■ 4.05
COL22A1-207ENST00000522546 TRIM41Q8WV44 630 aa40.34■■■■■ 4.05
COL22A1-207ENST00000522546 CHD1O14646 1710 aa40.33■■■■■ 4.05
COL22A1-207ENST00000522546 SOGA1O94964 1423 aa40.27■■■■■ 4.04
COL22A1-207ENST00000522546 TDRD9Q8NDG6 1382 aaKnown RBP40.16■■■■■ 4.02
COL22A1-207ENST00000522546 WDR97A6NE52 1622 aa40.16■■■■■ 4.02
COL22A1-207ENST00000522546 RIMBP3CA6NJZ7 1639 aa40.11■■■■■ 4.01
COL22A1-207ENST00000522546 RIMBP3BA6NNM3 1639 aa40.11■■■■■ 4.01
COL22A1-207ENST00000522546 RIMBP3Q9UFD9 1639 aa40.11■■■■■ 4.01
COL22A1-207ENST00000522546 FBLN2P98095 1184 aa40.06■■■■■ 4
COL22A1-207ENST00000522546 SNAPC4Q5SXM2 1469 aa40.04■■■■■ 4
COL22A1-207ENST00000522546 PBRM1Q86U86 1689 aa40.03■■■■■ 4
COL22A1-207ENST00000522546 ARHGEF11O15085 1522 aa39.96■■■■□ 3.99
COL22A1-207ENST00000522546 GRIN2BQ13224 1484 aa39.91■■■■□ 3.98
COL22A1-207ENST00000522546 BIVM-ERCC5R4GMW8 1640 aa39.91■■■■□ 3.98
COL22A1-207ENST00000522546 MAGI1Q96QZ7 1491 aaPredicted RBP39.88■■■■□ 3.97
COL22A1-207ENST00000522546 SYNJ1O43426 1573 aa39.87■■■■□ 3.97
COL22A1-207ENST00000522546 ABCA5Q8WWZ7 1642 aa39.87■■■■□ 3.97
COL22A1-207ENST00000522546 TOP2BQ02880 1626 aa39.85■■■■□ 3.97
COL22A1-207ENST00000522546 ABCA10Q8WWZ4 1543 aa39.85■■■■□ 3.97
COL22A1-207ENST00000522546 GAPVD1Q14C86 1478 aa39.84■■■■□ 3.97
COL22A1-207ENST00000522546 WRNQ14191 1432 aaPredicted RBP eCLIP39.82■■■■□ 3.97
COL22A1-207ENST00000522546 CHMP7Q8WUX9 453 aaPredicted RBP39.75■■■■□ 3.95
COL22A1-207ENST00000522546 SYNJ2O15056 1496 aa39.74■■■■□ 3.95
COL22A1-207ENST00000522546 CLASP1Q7Z460 1538 aa39.68■■■■□ 3.94
COL22A1-207ENST00000522546 ARAP1Q96P48 1450 aa39.58■■■■□ 3.93
COL22A1-207ENST00000522546 ADAMTS12P58397 1594 aa39.56■■■■□ 3.92
COL22A1-207ENST00000522546 CYB5RLQ6IPT4 315 aa39.55■■■■□ 3.92
COL22A1-207ENST00000522546 GRIN2AQ12879 1464 aa39.43■■■■□ 3.9
COL22A1-207ENST00000522546 ERICH3Q5RHP9 1530 aa39.38■■■■□ 3.89
COL22A1-207ENST00000522546 CEP170Q5SW79 1584 aa39.33■■■■□ 3.89
COL22A1-207ENST00000522546 FHAD1B1AJZ9 1412 aa39.31■■■■□ 3.88
COL22A1-207ENST00000522546 NUP160Q12769 1436 aa39.21■■■■□ 3.87
COL22A1-207ENST00000522546 ERCC6L2Q5T890 1561 aa39.15■■■■□ 3.86
COL22A1-207ENST00000522546 SHROOM2Q13796 1616 aa39.09■■■■□ 3.85
COL22A1-207ENST00000522546 TRHP20396 242 aaPredicted RBP39.06■■■■□ 3.84
COL22A1-207ENST00000522546 KIF27Q86VH2 1401 aa39.02■■■■□ 3.84
COL22A1-207ENST00000522546 CUL7Q14999 1698 aa39.01■■■■□ 3.84
COL22A1-207ENST00000522546 RUSC2Q8N2Y8 1516 aa39■■■■□ 3.83
COL22A1-207ENST00000522546 PRG4Q92954 1404 aaPredicted RBP38.84■■■■□ 3.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms