RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 NISCHQ9Y2I1 1504 aa38.68■■■■□ 3.78
TRAPPC9-213ENST00000522504 ABCC9O60706 1549 aa35.01■■■■□ 3.19
TRAPPC9-213ENST00000522504 CCDC180Q9P1Z9 1646 aa34.69■■■■□ 3.14
TRAPPC9-213ENST00000522504 RB1CC1Q8TDY2 1594 aa33.14■■■□□ 2.9
TRAPPC9-213ENST00000522504 DNAJC5BQ9UF47 199 aa33.12■■■□□ 2.89
TRAPPC9-213ENST00000522504 NACADO15069 1562 aa32.87■■■□□ 2.85
TRAPPC9-213ENST00000522504 DCAF8L2P0C7V8 631 aa32.77■■■□□ 2.84
TRAPPC9-213ENST00000522504 PABPN1Q86U42 306 aaKnown RBP eCLIP32.63■■■□□ 2.81
TRAPPC9-213ENST00000522504 UNC13AQ9UPW8 1703 aa32.4■■■□□ 2.78
TRAPPC9-213ENST00000522504 MYO15BQ96JP2 1530 aa32.36■■■□□ 2.77
TRAPPC9-213ENST00000522504 BICRAQ9NZM4 1560 aa32.28■■■□□ 2.76
TRAPPC9-213ENST00000522504 ZCCHC6Q5VYS8 1495 aaKnown RBP32.03■■■□□ 2.72
TRAPPC9-213ENST00000522504 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
TRAPPC9-213ENST00000522504 SHROOM4Q9ULL8 1493 aa31.71■■■□□ 2.67
TRAPPC9-213ENST00000522504 SCRIBQ14160 1630 aa31.69■■■□□ 2.66
TRAPPC9-213ENST00000522504 CC2D2AQ9P2K1 1620 aa31.57■■■□□ 2.64
TRAPPC9-213ENST00000522504 CECR2Q9BXF3 1484 aa31.53■■■□□ 2.64
TRAPPC9-213ENST00000522504 EIF4G1Q04637 1599 aaKnown RBP31.46■■■□□ 2.63
TRAPPC9-213ENST00000522504 DNAJC5Q9H3Z4 198 aa30.45■■■□□ 2.47
TRAPPC9-213ENST00000522504 NCAPD3P42695 1498 aa30.42■■■□□ 2.46
TRAPPC9-213ENST00000522504 ATAD2BQ9ULI0 1458 aa30.31■■■□□ 2.44
TRAPPC9-213ENST00000522504 SMARCA4P51532 1647 aa30.19■■■□□ 2.42
TRAPPC9-213ENST00000522504 ERCC6Q03468 1493 aa30.18■■■□□ 2.42
TRAPPC9-213ENST00000522504 CUX2O14529 1486 aa30.17■■■□□ 2.42
TRAPPC9-213ENST00000522504 SMARCA2P51531 1590 aa30.14■■■□□ 2.42
TRAPPC9-213ENST00000522504 HMGXB3Q12766 1538 aa30.12■■■□□ 2.41
TRAPPC9-213ENST00000522504 NESP48681 1621 aa30.05■■■□□ 2.4
TRAPPC9-213ENST00000522504 BAZ1AQ9NRL2 1556 aaPredicted RBP29.99■■■□□ 2.39
TRAPPC9-213ENST00000522504 BAZ1BQ9UIG0 1483 aaKnown RBP29.97■■■□□ 2.39
TRAPPC9-213ENST00000522504 PEG3Q9GZU2 1588 aa29.9■■■□□ 2.38
TRAPPC9-213ENST00000522504 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
TRAPPC9-213ENST00000522504 THOC2Q8NI27 1593 aaKnown RBP29.71■■■□□ 2.35
TRAPPC9-213ENST00000522504 LAMC3Q9Y6N6 1575 aa29.69■■■□□ 2.34
TRAPPC9-213ENST00000522504 KIF21AQ7Z4S6 1674 aa29.56■■■□□ 2.32
TRAPPC9-213ENST00000522504 PDS5BQ9NTI5 1447 aa29.55■■■□□ 2.32
TRAPPC9-213ENST00000522504 CADPSQ9ULU8 1353 aa29.5■■■□□ 2.31
TRAPPC9-213ENST00000522504 WIZO95785 1651 aa29.44■■■□□ 2.3
TRAPPC9-213ENST00000522504 MRC2Q9UBG0 1479 aa29.33■■■□□ 2.29
TRAPPC9-213ENST00000522504 WDR62O43379 1518 aa29.26■■■□□ 2.27
TRAPPC9-213ENST00000522504 RSF1Q96T23 1441 aaPredicted RBP29.18■■■□□ 2.26
TRAPPC9-213ENST00000522504 CEP164Q9UPV0 1460 aa29.16■■■□□ 2.26
TRAPPC9-213ENST00000522504 FANCD2Q9BXW9 1451 aa29.15■■■□□ 2.26
TRAPPC9-213ENST00000522504 CFTRP13569 1480 aa29.11■■■□□ 2.25
TRAPPC9-213ENST00000522504 TRIM41Q8WV44 630 aa29.04■■■□□ 2.24
TRAPPC9-213ENST00000522504 TOP2AP11388 1531 aaKnown RBP29.04■■■□□ 2.24
TRAPPC9-213ENST00000522504 URB2Q14146 1524 aaKnown RBP28.95■■■□□ 2.23
TRAPPC9-213ENST00000522504 OSCARQ8IYS5 282 aa28.81■■■□□ 2.2
TRAPPC9-213ENST00000522504 CCDC88BA6NC98 1476 aa28.77■■■□□ 2.2
TRAPPC9-213ENST00000522504 PRDM2Q13029 1718 aa28.66■■■□□ 2.18
TRAPPC9-213ENST00000522504 ZNF608Q9ULD9 1512 aaPredicted RBP28.65■■■□□ 2.18
TRAPPC9-213ENST00000522504 IFT140Q96RY7 1462 aa28.59■■■□□ 2.17
TRAPPC9-213ENST00000522504 TOPBP1Q92547 1522 aa28.58■■■□□ 2.17
TRAPPC9-213ENST00000522504 RIMBP3CA6NJZ7 1639 aa28.43■■■□□ 2.14
TRAPPC9-213ENST00000522504 RIMBP3BA6NNM3 1639 aa28.43■■■□□ 2.14
TRAPPC9-213ENST00000522504 RIMBP3Q9UFD9 1639 aa28.43■■■□□ 2.14
TRAPPC9-213ENST00000522504 ABCC8Q09428 1581 aa28.42■■■□□ 2.14
TRAPPC9-213ENST00000522504 DNMBPQ6XZF7 1577 aa28.41■■■□□ 2.14
TRAPPC9-213ENST00000522504 EIF4G3O43432 1585 aaKnown RBP28.4■■■□□ 2.14
TRAPPC9-213ENST00000522504 AQRO60306 1485 aaKnown RBP eCLIP28.36■■■□□ 2.133e-6■■■■■ 26.9
TRAPPC9-213ENST00000522504 ARHGEF11O15085 1522 aa28.34■■■□□ 2.13
TRAPPC9-213ENST00000522504 TARBP1Q13395 1621 aaKnown RBP28.33■■■□□ 2.13
TRAPPC9-213ENST00000522504 POLA1P09884 1462 aaPredicted RBP28.28■■■□□ 2.12
TRAPPC9-213ENST00000522504 RAD54L2Q9Y4B4 1467 aa28.22■■■□□ 2.11
TRAPPC9-213ENST00000522504 CHD1O14646 1710 aa28.19■■■□□ 2.1
TRAPPC9-213ENST00000522504 CYB5RLQ6IPT4 315 aa28.19■■■□□ 2.1
TRAPPC9-213ENST00000522504 FBLN2P98095 1184 aa28.18■■■□□ 2.1
TRAPPC9-213ENST00000522504 TDRD9Q8NDG6 1382 aaKnown RBP28.16■■■□□ 2.1
TRAPPC9-213ENST00000522504 SOGA1O94964 1423 aa28.15■■■□□ 2.1
TRAPPC9-213ENST00000522504 ARAP1Q96P48 1450 aa28.08■■■□□ 2.09
TRAPPC9-213ENST00000522504 FGD5Q6ZNL6 1462 aa28.08■■■□□ 2.09
TRAPPC9-213ENST00000522504 CUX1P39880 1505 aa28.05■■■□□ 2.08
TRAPPC9-213ENST00000522504 SNAPC4Q5SXM2 1469 aa28.02■■■□□ 2.08
TRAPPC9-213ENST00000522504 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
TRAPPC9-213ENST00000522504 CHMP7Q8WUX9 453 aaPredicted RBP27.92■■■□□ 2.06
TRAPPC9-213ENST00000522504 CLASP1Q7Z460 1538 aa27.92■■■□□ 2.06
TRAPPC9-213ENST00000522504 GRIN2BQ13224 1484 aa27.89■■■□□ 2.06
TRAPPC9-213ENST00000522504 MAGI1Q96QZ7 1491 aaPredicted RBP27.89■■■□□ 2.06
TRAPPC9-213ENST00000522504 TRHP20396 242 aaPredicted RBP27.89■■■□□ 2.06
TRAPPC9-213ENST00000522504 SYNJ2O15056 1496 aa27.83■■■□□ 2.04
TRAPPC9-213ENST00000522504 SYNJ1O43426 1573 aa27.82■■■□□ 2.04
TRAPPC9-213ENST00000522504 GAPVD1Q14C86 1478 aa27.79■■■□□ 2.04
TRAPPC9-213ENST00000522504 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
TRAPPC9-213ENST00000522504 ABCA10Q8WWZ4 1543 aa27.73■■■□□ 2.03
TRAPPC9-213ENST00000522504 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
TRAPPC9-213ENST00000522504 ABCA5Q8WWZ7 1642 aa27.69■■■□□ 2.02
TRAPPC9-213ENST00000522504 WRNQ14191 1432 aaPredicted RBP eCLIP27.58■■■□□ 2
TRAPPC9-213ENST00000522504 GRIN2AQ12879 1464 aa27.55■■■□□ 2
TRAPPC9-213ENST00000522504 ERCC6L2Q5T890 1561 aa27.53■■■□□ 2
TRAPPC9-213ENST00000522504 ADAMTS12P58397 1594 aa27.5■■□□□ 1.99
TRAPPC9-213ENST00000522504 NUP160Q12769 1436 aa27.49■■□□□ 1.99
TRAPPC9-213ENST00000522504 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
TRAPPC9-213ENST00000522504 CEP170Q5SW79 1584 aa27.48■■□□□ 1.99
TRAPPC9-213ENST00000522504 BIVM-ERCC5R4GMW8 1640 aa27.47■■□□□ 1.99
TRAPPC9-213ENST00000522504 FHAD1B1AJZ9 1412 aa27.42■■□□□ 1.98
TRAPPC9-213ENST00000522504 ERICH3Q5RHP9 1530 aa27.35■■□□□ 1.97
TRAPPC9-213ENST00000522504 SHROOM2Q13796 1616 aa27.34■■□□□ 1.97
TRAPPC9-213ENST00000522504 PRG4Q92954 1404 aaPredicted RBP27.24■■□□□ 1.95
TRAPPC9-213ENST00000522504 JPH4Q96JJ6 628 aa27.21■■□□□ 1.95
TRAPPC9-213ENST00000522504 AEBP2Q6ZN18 517 aaPredicted RBP27.16■■□□□ 1.94
TRAPPC9-213ENST00000522504 RUSC2Q8N2Y8 1516 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms