RNA–Protein interactions for RNA: ENST00000522450.5

PNMA2-205, Transcript of PNMA family member 2, humanhuman

TSL 4

Gene PNMA2, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA2-205ENST00000522450 NISCHQ9Y2I1 1504 aa31.38■■■□□ 2.61
PNMA2-205ENST00000522450 ABCC9O60706 1549 aa28.28■■■□□ 2.12
PNMA2-205ENST00000522450 CCDC180Q9P1Z9 1646 aa28.18■■■□□ 2.1
PNMA2-205ENST00000522450 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
PNMA2-205ENST00000522450 DCAF8L2P0C7V8 631 aa26.66■■□□□ 1.86
PNMA2-205ENST00000522450 NACADO15069 1562 aa26.65■■□□□ 1.86
PNMA2-205ENST00000522450 DNAJC5BQ9UF47 199 aa26.51■■□□□ 1.83
PNMA2-205ENST00000522450 PABPN1Q86U42 306 aaKnown RBP eCLIP26.34■■□□□ 1.81
PNMA2-205ENST00000522450 UNC13AQ9UPW8 1703 aa26.3■■□□□ 1.8
PNMA2-205ENST00000522450 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
PNMA2-205ENST00000522450 BICRAQ9NZM4 1560 aa26.05■■□□□ 1.76
PNMA2-205ENST00000522450 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
PNMA2-205ENST00000522450 DCAF1Q9Y4B6 1507 aa25.86■■□□□ 1.73
PNMA2-205ENST00000522450 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
PNMA2-205ENST00000522450 SHROOM4Q9ULL8 1493 aa25.64■■□□□ 1.69
PNMA2-205ENST00000522450 CC2D2AQ9P2K1 1620 aa25.52■■□□□ 1.68
PNMA2-205ENST00000522450 CECR2Q9BXF3 1484 aa25.45■■□□□ 1.66
PNMA2-205ENST00000522450 EIF4G1Q04637 1599 aaKnown RBP25.44■■□□□ 1.66
PNMA2-205ENST00000522450 NCAPD3P42695 1498 aa24.57■■□□□ 1.52
PNMA2-205ENST00000522450 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
PNMA2-205ENST00000522450 SMARCA4P51532 1647 aa24.5■■□□□ 1.51
PNMA2-205ENST00000522450 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
PNMA2-205ENST00000522450 ERCC6Q03468 1493 aa24.44■■□□□ 1.5
PNMA2-205ENST00000522450 HMGXB3Q12766 1538 aa24.39■■□□□ 1.49
PNMA2-205ENST00000522450 DNAJC5Q9H3Z4 198 aa24.37■■□□□ 1.49
PNMA2-205ENST00000522450 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
PNMA2-205ENST00000522450 CUX2O14529 1486 aa24.32■■□□□ 1.48
PNMA2-205ENST00000522450 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
PNMA2-205ENST00000522450 NESP48681 1621 aa24.27■■□□□ 1.48
PNMA2-205ENST00000522450 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.47
PNMA2-205ENST00000522450 MROH2BQ7Z745 1585 aa24.2■■□□□ 1.46
PNMA2-205ENST00000522450 LAMC3Q9Y6N6 1575 aa24.06■■□□□ 1.44
PNMA2-205ENST00000522450 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
PNMA2-205ENST00000522450 KIF21AQ7Z4S6 1674 aa23.98■■□□□ 1.43
PNMA2-205ENST00000522450 WIZO95785 1651 aa23.95■■□□□ 1.42
PNMA2-205ENST00000522450 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
PNMA2-205ENST00000522450 CADPSQ9ULU8 1353 aa23.85■■□□□ 1.41
PNMA2-205ENST00000522450 MRC2Q9UBG0 1479 aa23.73■■□□□ 1.39
PNMA2-205ENST00000522450 RSF1Q96T23 1441 aaPredicted RBP23.66■■□□□ 1.38
PNMA2-205ENST00000522450 WDR62O43379 1518 aa23.64■■□□□ 1.38
PNMA2-205ENST00000522450 CEP164Q9UPV0 1460 aa23.64■■□□□ 1.38
PNMA2-205ENST00000522450 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
PNMA2-205ENST00000522450 TOP2AP11388 1531 aaKnown RBP23.59■■□□□ 1.37
PNMA2-205ENST00000522450 CFTRP13569 1480 aa23.56■■□□□ 1.36
PNMA2-205ENST00000522450 URB2Q14146 1524 aaKnown RBP23.4■■□□□ 1.34
PNMA2-205ENST00000522450 TRIM41Q8WV44 630 aa23.4■■□□□ 1.34
PNMA2-205ENST00000522450 PRDM2Q13029 1718 aa23.39■■□□□ 1.34
PNMA2-205ENST00000522450 CCDC88BA6NC98 1476 aa23.34■■□□□ 1.33
PNMA2-205ENST00000522450 OSCARQ8IYS5 282 aa23.25■■□□□ 1.31
PNMA2-205ENST00000522450 TOPBP1Q92547 1522 aa23.15■■□□□ 1.3
PNMA2-205ENST00000522450 IFT140Q96RY7 1462 aa23.15■■□□□ 1.3
PNMA2-205ENST00000522450 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
PNMA2-205ENST00000522450 ABCC8Q09428 1581 aa23.09■■□□□ 1.29
PNMA2-205ENST00000522450 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
PNMA2-205ENST00000522450 EIF4G3O43432 1585 aaKnown RBP23.01■■□□□ 1.27
PNMA2-205ENST00000522450 RIMBP3CA6NJZ7 1639 aa22.97■■□□□ 1.27
PNMA2-205ENST00000522450 RIMBP3BA6NNM3 1639 aa22.97■■□□□ 1.27
PNMA2-205ENST00000522450 RIMBP3Q9UFD9 1639 aa22.97■■□□□ 1.27
PNMA2-205ENST00000522450 TARBP1Q13395 1621 aaKnown RBP22.94■■□□□ 1.26
PNMA2-205ENST00000522450 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.26
PNMA2-205ENST00000522450 POLA1P09884 1462 aaPredicted RBP22.9■■□□□ 1.26
PNMA2-205ENST00000522450 CHD1O14646 1710 aa22.89■■□□□ 1.26
PNMA2-205ENST00000522450 FBLN2P98095 1184 aa22.87■■□□□ 1.25
PNMA2-205ENST00000522450 ARHGEF11O15085 1522 aa22.86■■□□□ 1.25
PNMA2-205ENST00000522450 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
PNMA2-205ENST00000522450 SOGA1O94964 1423 aa22.82■■□□□ 1.24
PNMA2-205ENST00000522450 TDRD9Q8NDG6 1382 aaKnown RBP22.8■■□□□ 1.24
PNMA2-205ENST00000522450 FGD5Q6ZNL6 1462 aa22.77■■□□□ 1.24
PNMA2-205ENST00000522450 CYB5RLQ6IPT4 315 aa22.76■■□□□ 1.23
PNMA2-205ENST00000522450 CUX1P39880 1505 aa22.74■■□□□ 1.23
PNMA2-205ENST00000522450 SUPT5HO00267 1087 aaKnown RBP22.72■■□□□ 1.23
PNMA2-205ENST00000522450 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
PNMA2-205ENST00000522450 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
PNMA2-205ENST00000522450 CHMP7Q8WUX9 453 aaPredicted RBP22.65■■□□□ 1.22
PNMA2-205ENST00000522450 ARAP1Q96P48 1450 aa22.63■■□□□ 1.21
PNMA2-205ENST00000522450 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
PNMA2-205ENST00000522450 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
PNMA2-205ENST00000522450 SYNJ1O43426 1573 aa22.58■■□□□ 1.2
PNMA2-205ENST00000522450 PBRM1Q86U86 1689 aa22.58■■□□□ 1.2
PNMA2-205ENST00000522450 TRHP20396 242 aaPredicted RBP22.56■■□□□ 1.2
PNMA2-205ENST00000522450 CLASP1Q7Z460 1538 aa22.55■■□□□ 1.2
PNMA2-205ENST00000522450 GAPVD1Q14C86 1478 aa22.54■■□□□ 1.2
PNMA2-205ENST00000522450 SYNJ2O15056 1496 aa22.54■■□□□ 1.2
PNMA2-205ENST00000522450 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
PNMA2-205ENST00000522450 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
PNMA2-205ENST00000522450 WRNQ14191 1432 aaPredicted RBP eCLIP22.41■■□□□ 1.18
PNMA2-205ENST00000522450 BIVM-ERCC5R4GMW8 1640 aa22.37■■□□□ 1.17
PNMA2-205ENST00000522450 TOP2BQ02880 1626 aa22.36■■□□□ 1.17
PNMA2-205ENST00000522450 GRIN2AQ12879 1464 aa22.32■■□□□ 1.16
PNMA2-205ENST00000522450 ADAMTS12P58397 1594 aa22.31■■□□□ 1.16
PNMA2-205ENST00000522450 CEP170Q5SW79 1584 aa22.25■■□□□ 1.15
PNMA2-205ENST00000522450 FHAD1B1AJZ9 1412 aa22.23■■□□□ 1.15
PNMA2-205ENST00000522450 ERCC6L2Q5T890 1561 aa22.23■■□□□ 1.15
PNMA2-205ENST00000522450 NUP160Q12769 1436 aa22.21■■□□□ 1.15
PNMA2-205ENST00000522450 ERICH3Q5RHP9 1530 aa22.2■■□□□ 1.14
PNMA2-205ENST00000522450 SHROOM2Q13796 1616 aa22.13■■□□□ 1.13
PNMA2-205ENST00000522450 PRG4Q92954 1404 aaPredicted RBP22.06■■□□□ 1.12
PNMA2-205ENST00000522450 JPH4Q96JJ6 628 aa22.04■■□□□ 1.12
PNMA2-205ENST00000522450 RUSC2Q8N2Y8 1516 aa21.99■■□□□ 1.11
PNMA2-205ENST00000522450 AEBP2Q6ZN18 517 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms