RNA–Protein interactions for RNA: ENST00000522309.1

RTL8A-204, Transcript of retrotransposon Gag like 8A, humanhuman

TSL 1 (best)

Gene RTL8A, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8A-204ENST00000522309 NISCHQ9Y2I1 1504 aa43.2■■■■■ 4.51
RTL8A-204ENST00000522309 ABCC9O60706 1549 aa38.9■■■■□ 3.82
RTL8A-204ENST00000522309 CCDC180Q9P1Z9 1646 aa38.77■■■■□ 3.8
RTL8A-204ENST00000522309 RB1CC1Q8TDY2 1594 aa36.94■■■■□ 3.5
RTL8A-204ENST00000522309 DNAJC5BQ9UF47 199 aa36.71■■■■□ 3.47
RTL8A-204ENST00000522309 NACADO15069 1562 aa36.69■■■■□ 3.46
RTL8A-204ENST00000522309 DCAF8L2P0C7V8 631 aa36.49■■■■□ 3.43
RTL8A-204ENST00000522309 PABPN1Q86U42 306 aaKnown RBP eCLIP36.24■■■■□ 3.39
RTL8A-204ENST00000522309 UNC13AQ9UPW8 1703 aa36.21■■■■□ 3.39
RTL8A-204ENST00000522309 MYO15BQ96JP2 1530 aa36.16■■■■□ 3.38
RTL8A-204ENST00000522309 BICRAQ9NZM4 1560 aa35.96■■■■□ 3.35
RTL8A-204ENST00000522309 ZCCHC6Q5VYS8 1495 aaKnown RBP35.76■■■■□ 3.32
RTL8A-204ENST00000522309 DCAF1Q9Y4B6 1507 aa35.66■■■■□ 3.3
RTL8A-204ENST00000522309 SHROOM4Q9ULL8 1493 aa35.35■■■■□ 3.25
RTL8A-204ENST00000522309 SCRIBQ14160 1630 aa35.33■■■■□ 3.25
RTL8A-204ENST00000522309 CC2D2AQ9P2K1 1620 aa35.15■■■■□ 3.22
RTL8A-204ENST00000522309 CECR2Q9BXF3 1484 aa35.04■■■■□ 3.2
RTL8A-204ENST00000522309 EIF4G1Q04637 1599 aaKnown RBP35.04■■■■□ 3.2
RTL8A-204ENST00000522309 NCAPD3P42695 1498 aa33.9■■■■□ 3.02
RTL8A-204ENST00000522309 ATAD2BQ9ULI0 1458 aa33.79■■■■□ 3
RTL8A-204ENST00000522309 DNAJC5Q9H3Z4 198 aa33.72■■■□□ 2.99
RTL8A-204ENST00000522309 SMARCA4P51532 1647 aa33.71■■■□□ 2.99
RTL8A-204ENST00000522309 SMARCA2P51531 1590 aa33.63■■■□□ 2.97
RTL8A-204ENST00000522309 HMGXB3Q12766 1538 aa33.59■■■□□ 2.97
RTL8A-204ENST00000522309 CUX2O14529 1486 aa33.53■■■□□ 2.96
RTL8A-204ENST00000522309 ERCC6Q03468 1493 aa33.53■■■□□ 2.96
RTL8A-204ENST00000522309 BAZ1AQ9NRL2 1556 aaPredicted RBP33.49■■■□□ 2.95
RTL8A-204ENST00000522309 NESP48681 1621 aa33.42■■■□□ 2.94
RTL8A-204ENST00000522309 BAZ1BQ9UIG0 1483 aaKnown RBP33.4■■■□□ 2.94
RTL8A-204ENST00000522309 PEG3Q9GZU2 1588 aa33.39■■■□□ 2.94
RTL8A-204ENST00000522309 MROH2BQ7Z745 1585 aa33.3■■■□□ 2.92
RTL8A-204ENST00000522309 LAMC3Q9Y6N6 1575 aa33.11■■■□□ 2.89
RTL8A-204ENST00000522309 THOC2Q8NI27 1593 aaKnown RBP33.07■■■□□ 2.88
RTL8A-204ENST00000522309 KIF21AQ7Z4S6 1674 aa32.97■■■□□ 2.87
RTL8A-204ENST00000522309 PDS5BQ9NTI5 1447 aa32.92■■■□□ 2.86
RTL8A-204ENST00000522309 WIZO95785 1651 aa32.9■■■□□ 2.86
RTL8A-204ENST00000522309 CADPSQ9ULU8 1353 aa32.86■■■□□ 2.85
RTL8A-204ENST00000522309 MRC2Q9UBG0 1479 aa32.65■■■□□ 2.82
RTL8A-204ENST00000522309 WDR62O43379 1518 aa32.58■■■□□ 2.81
RTL8A-204ENST00000522309 RSF1Q96T23 1441 aaPredicted RBP32.58■■■□□ 2.81
RTL8A-204ENST00000522309 CEP164Q9UPV0 1460 aa32.48■■■□□ 2.79
RTL8A-204ENST00000522309 FANCD2Q9BXW9 1451 aa32.47■■■□□ 2.79
RTL8A-204ENST00000522309 CFTRP13569 1480 aa32.46■■■□□ 2.79
RTL8A-204ENST00000522309 TOP2AP11388 1531 aaKnown RBP32.43■■■□□ 2.78
RTL8A-204ENST00000522309 URB2Q14146 1524 aaKnown RBP32.24■■■□□ 2.75
RTL8A-204ENST00000522309 TRIM41Q8WV44 630 aa32.14■■■□□ 2.74
RTL8A-204ENST00000522309 PRDM2Q13029 1718 aa32.12■■■□□ 2.73
RTL8A-204ENST00000522309 CCDC88BA6NC98 1476 aa32.11■■■□□ 2.73
RTL8A-204ENST00000522309 OSCARQ8IYS5 282 aa32.03■■■□□ 2.72
RTL8A-204ENST00000522309 ZNF608Q9ULD9 1512 aaPredicted RBP31.87■■■□□ 2.69
RTL8A-204ENST00000522309 TOPBP1Q92547 1522 aa31.86■■■□□ 2.69
RTL8A-204ENST00000522309 IFT140Q96RY7 1462 aa31.85■■■□□ 2.69
RTL8A-204ENST00000522309 ABCC8Q09428 1581 aa31.74■■■□□ 2.67
RTL8A-204ENST00000522309 DNMBPQ6XZF7 1577 aa31.71■■■□□ 2.67
RTL8A-204ENST00000522309 EIF4G3O43432 1585 aaKnown RBP31.64■■■□□ 2.65
RTL8A-204ENST00000522309 RIMBP3CA6NJZ7 1639 aa31.62■■■□□ 2.65
RTL8A-204ENST00000522309 RIMBP3BA6NNM3 1639 aa31.62■■■□□ 2.65
RTL8A-204ENST00000522309 RIMBP3Q9UFD9 1639 aa31.62■■■□□ 2.65
RTL8A-204ENST00000522309 TARBP1Q13395 1621 aaKnown RBP31.6■■■□□ 2.65
RTL8A-204ENST00000522309 AQRO60306 1485 aaKnown RBP eCLIP31.56■■■□□ 2.642e-9■■■■■ 56.7
RTL8A-204ENST00000522309 POLA1P09884 1462 aaPredicted RBP31.52■■■□□ 2.64
RTL8A-204ENST00000522309 ARHGEF11O15085 1522 aa31.49■■■□□ 2.63
RTL8A-204ENST00000522309 CHD1O14646 1710 aa31.46■■■□□ 2.63
RTL8A-204ENST00000522309 RAD54L2Q9Y4B4 1467 aa31.44■■■□□ 2.62
RTL8A-204ENST00000522309 SOGA1O94964 1423 aa31.38■■■□□ 2.61
RTL8A-204ENST00000522309 TDRD9Q8NDG6 1382 aaKnown RBP31.35■■■□□ 2.61
RTL8A-204ENST00000522309 FBLN2P98095 1184 aa31.33■■■□□ 2.61
RTL8A-204ENST00000522309 FGD5Q6ZNL6 1462 aa31.31■■■□□ 2.6
RTL8A-204ENST00000522309 CYB5RLQ6IPT4 315 aa31.3■■■□□ 2.6
RTL8A-204ENST00000522309 CUX1P39880 1505 aa31.29■■■□□ 2.6
RTL8A-204ENST00000522309 ARAP1Q96P48 1450 aa31.2■■■□□ 2.58
RTL8A-204ENST00000522309 WDR97A6NE52 1622 aa31.2■■■□□ 2.58
RTL8A-204ENST00000522309 SNAPC4Q5SXM2 1469 aa31.19■■■□□ 2.58
RTL8A-204ENST00000522309 GRIN2BQ13224 1484 aa31.09■■■□□ 2.57
RTL8A-204ENST00000522309 MAGI1Q96QZ7 1491 aaPredicted RBP31.09■■■□□ 2.57
RTL8A-204ENST00000522309 CHMP7Q8WUX9 453 aaPredicted RBP31.09■■■□□ 2.57
RTL8A-204ENST00000522309 CLASP1Q7Z460 1538 aa31.08■■■□□ 2.57
RTL8A-204ENST00000522309 SUPT5HO00267 1087 aaKnown RBP31.04■■■□□ 2.56
RTL8A-204ENST00000522309 SYNJ2O15056 1496 aa31.01■■■□□ 2.55
RTL8A-204ENST00000522309 SYNJ1O43426 1573 aa31■■■□□ 2.55
RTL8A-204ENST00000522309 GAPVD1Q14C86 1478 aa30.98■■■□□ 2.55
RTL8A-204ENST00000522309 PBRM1Q86U86 1689 aa30.97■■■□□ 2.55
RTL8A-204ENST00000522309 ABCA10Q8WWZ4 1543 aa30.94■■■□□ 2.54
RTL8A-204ENST00000522309 TRHP20396 242 aaPredicted RBP30.93■■■□□ 2.54
RTL8A-204ENST00000522309 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
RTL8A-204ENST00000522309 WRNQ14191 1432 aaPredicted RBP eCLIP30.78■■■□□ 2.52
RTL8A-204ENST00000522309 BIVM-ERCC5R4GMW8 1640 aa30.74■■■□□ 2.51
RTL8A-204ENST00000522309 TOP2BQ02880 1626 aa30.73■■■□□ 2.51
RTL8A-204ENST00000522309 GRIN2AQ12879 1464 aa30.7■■■□□ 2.5
RTL8A-204ENST00000522309 ADAMTS12P58397 1594 aa30.66■■■□□ 2.5
RTL8A-204ENST00000522309 ERCC6L2Q5T890 1561 aa30.64■■■□□ 2.5
RTL8A-204ENST00000522309 NUP160Q12769 1436 aa30.63■■■□□ 2.49
RTL8A-204ENST00000522309 CEP170Q5SW79 1584 aa30.62■■■□□ 2.49
RTL8A-204ENST00000522309 FHAD1B1AJZ9 1412 aa30.58■■■□□ 2.49
RTL8A-204ENST00000522309 ERICH3Q5RHP9 1530 aa30.53■■■□□ 2.48
RTL8A-204ENST00000522309 SHROOM2Q13796 1616 aa30.51■■■□□ 2.47
RTL8A-204ENST00000522309 JPH4Q96JJ6 628 aa30.33■■■□□ 2.45
RTL8A-204ENST00000522309 PRG4Q92954 1404 aaPredicted RBP30.32■■■□□ 2.44
RTL8A-204ENST00000522309 RUSC2Q8N2Y8 1516 aa30.23■■■□□ 2.43
RTL8A-204ENST00000522309 IGF1RP08069 1367 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms