RNA–Protein interactions for RNA: ENST00000522245.1

PTK2B-215, Transcript of protein tyrosine kinase 2 beta, humanhuman

TSL 2

Gene PTK2B, Length 762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2B-215ENST00000522245 NISCHQ9Y2I1 1504 aa42.62■■■■■ 4.41
PTK2B-215ENST00000522245 CCDC180Q9P1Z9 1646 aa37.87■■■■□ 3.65
PTK2B-215ENST00000522245 ABCC9O60706 1549 aa37.48■■■■□ 3.59
PTK2B-215ENST00000522245 DCAF8L2P0C7V8 631 aa35.89■■■■□ 3.34
PTK2B-215ENST00000522245 RB1CC1Q8TDY2 1594 aa35.85■■■■□ 3.33
PTK2B-215ENST00000522245 NACADO15069 1562 aa35.75■■■■□ 3.31
PTK2B-215ENST00000522245 MYO15BQ96JP2 1530 aa35.44■■■■□ 3.26
PTK2B-215ENST00000522245 ZCCHC6Q5VYS8 1495 aaKnown RBP35.43■■■■□ 3.26
PTK2B-215ENST00000522245 DCAF1Q9Y4B6 1507 aa35.2■■■■□ 3.23
PTK2B-215ENST00000522245 PABPN1Q86U42 306 aaKnown RBP eCLIP35.07■■■■□ 3.2
PTK2B-215ENST00000522245 UNC13AQ9UPW8 1703 aa34.89■■■■□ 3.18
PTK2B-215ENST00000522245 BICRAQ9NZM4 1560 aa34.78■■■■□ 3.16
PTK2B-215ENST00000522245 DNAJC5BQ9UF47 199 aa34.71■■■■□ 3.15
PTK2B-215ENST00000522245 SCRIBQ14160 1630 aa34.64■■■■□ 3.14
PTK2B-215ENST00000522245 SHROOM4Q9ULL8 1493 aa34.37■■■■□ 3.09
PTK2B-215ENST00000522245 EIF4G1Q04637 1599 aaKnown RBP33.89■■■■□ 3.02
PTK2B-215ENST00000522245 CC2D2AQ9P2K1 1620 aa33.81■■■■□ 3
PTK2B-215ENST00000522245 CECR2Q9BXF3 1484 aa33.7■■■□□ 2.99
PTK2B-215ENST00000522245 SMARCA4P51532 1647 aa33.07■■■□□ 2.88
PTK2B-215ENST00000522245 NCAPD3P42695 1498 aa33.05■■■□□ 2.88
PTK2B-215ENST00000522245 ATAD2BQ9ULI0 1458 aa33.04■■■□□ 2.88
PTK2B-215ENST00000522245 BAZ1AQ9NRL2 1556 aaPredicted RBP33.02■■■□□ 2.88
PTK2B-215ENST00000522245 SMARCA2P51531 1590 aa32.93■■■□□ 2.86
PTK2B-215ENST00000522245 MROH2BQ7Z745 1585 aa32.86■■■□□ 2.85
PTK2B-215ENST00000522245 HMGXB3Q12766 1538 aa32.79■■■□□ 2.84
PTK2B-215ENST00000522245 PEG3Q9GZU2 1588 aa32.74■■■□□ 2.83
PTK2B-215ENST00000522245 BAZ1BQ9UIG0 1483 aaKnown RBP32.74■■■□□ 2.83
PTK2B-215ENST00000522245 WIZO95785 1651 aa32.43■■■□□ 2.78
PTK2B-215ENST00000522245 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
PTK2B-215ENST00000522245 NESP48681 1621 aa32.35■■■□□ 2.77
PTK2B-215ENST00000522245 ERCC6Q03468 1493 aa32.33■■■□□ 2.77
PTK2B-215ENST00000522245 LAMC3Q9Y6N6 1575 aa32.14■■■□□ 2.74
PTK2B-215ENST00000522245 CADPSQ9ULU8 1353 aa32.11■■■□□ 2.73
PTK2B-215ENST00000522245 TOP2AP11388 1531 aaKnown RBP32.1■■■□□ 2.73
PTK2B-215ENST00000522245 DNAJC5Q9H3Z4 198 aa32.05■■■□□ 2.72
PTK2B-215ENST00000522245 PDS5BQ9NTI5 1447 aa32.03■■■□□ 2.72
PTK2B-215ENST00000522245 CUX2O14529 1486 aa32.03■■■□□ 2.72
PTK2B-215ENST00000522245 CFTRP13569 1480 aa31.83■■■□□ 2.69
PTK2B-215ENST00000522245 KIF21AQ7Z4S6 1674 aa31.83■■■□□ 2.69
PTK2B-215ENST00000522245 THOC2Q8NI27 1593 aaKnown RBP31.81■■■□□ 2.68
PTK2B-215ENST00000522245 CCDC88BA6NC98 1476 aa31.78■■■□□ 2.68
PTK2B-215ENST00000522245 FANCD2Q9BXW9 1451 aa31.72■■■□□ 2.67
PTK2B-215ENST00000522245 MRC2Q9UBG0 1479 aa31.69■■■□□ 2.66
PTK2B-215ENST00000522245 CEP164Q9UPV0 1460 aa31.67■■■□□ 2.66
PTK2B-215ENST00000522245 WDR62O43379 1518 aa31.55■■■□□ 2.64
PTK2B-215ENST00000522245 SUPT5HO00267 1087 aaKnown RBP31.51■■■□□ 2.63
PTK2B-215ENST00000522245 URB2Q14146 1524 aaKnown RBP31.4■■■□□ 2.62
PTK2B-215ENST00000522245 PRDM2Q13029 1718 aa31.33■■■□□ 2.61
PTK2B-215ENST00000522245 TOPBP1Q92547 1522 aa31.16■■■□□ 2.58
PTK2B-215ENST00000522245 ABCC8Q09428 1581 aa31.13■■■□□ 2.57
PTK2B-215ENST00000522245 DNMBPQ6XZF7 1577 aa31.06■■■□□ 2.56
PTK2B-215ENST00000522245 IFT140Q96RY7 1462 aa31.04■■■□□ 2.56
PTK2B-215ENST00000522245 ZNF608Q9ULD9 1512 aaPredicted RBP30.94■■■□□ 2.54
PTK2B-215ENST00000522245 POLA1P09884 1462 aaPredicted RBP30.89■■■□□ 2.53
PTK2B-215ENST00000522245 CUX1P39880 1505 aa30.83■■■□□ 2.53
PTK2B-215ENST00000522245 SOGA1O94964 1423 aa30.81■■■□□ 2.52
PTK2B-215ENST00000522245 RAD54L2Q9Y4B4 1467 aa30.8■■■□□ 2.52
PTK2B-215ENST00000522245 TARBP1Q13395 1621 aaKnown RBP30.78■■■□□ 2.52
PTK2B-215ENST00000522245 FGD5Q6ZNL6 1462 aa30.77■■■□□ 2.52
PTK2B-215ENST00000522245 OSCARQ8IYS5 282 aa30.76■■■□□ 2.51
PTK2B-215ENST00000522245 AQRO60306 1485 aaKnown RBP eCLIP30.76■■■□□ 2.51
PTK2B-215ENST00000522245 EIF4G3O43432 1585 aaKnown RBP30.71■■■□□ 2.51
PTK2B-215ENST00000522245 TDRD9Q8NDG6 1382 aaKnown RBP30.69■■■□□ 2.5
PTK2B-215ENST00000522245 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
PTK2B-215ENST00000522245 FBLN2P98095 1184 aa30.51■■■□□ 2.47
PTK2B-215ENST00000522245 WDR97A6NE52 1622 aa30.48■■■□□ 2.47
PTK2B-215ENST00000522245 ABCA10Q8WWZ4 1543 aa30.45■■■□□ 2.47
PTK2B-215ENST00000522245 SYNJ1O43426 1573 aa30.45■■■□□ 2.46
PTK2B-215ENST00000522245 TOP2BQ02880 1626 aa30.44■■■□□ 2.46
PTK2B-215ENST00000522245 GRIN2BQ13224 1484 aa30.44■■■□□ 2.46
PTK2B-215ENST00000522245 SNAPC4Q5SXM2 1469 aa30.44■■■□□ 2.46
PTK2B-215ENST00000522245 TRIM41Q8WV44 630 aa30.42■■■□□ 2.46
PTK2B-215ENST00000522245 GAPVD1Q14C86 1478 aa30.41■■■□□ 2.46
PTK2B-215ENST00000522245 BIVM-ERCC5R4GMW8 1640 aa30.4■■■□□ 2.46
PTK2B-215ENST00000522245 CHMP7Q8WUX9 453 aaPredicted RBP30.36■■■□□ 2.45
PTK2B-215ENST00000522245 MAGI1Q96QZ7 1491 aaPredicted RBP30.35■■■□□ 2.45
PTK2B-215ENST00000522245 CHD1O14646 1710 aa30.32■■■□□ 2.44
PTK2B-215ENST00000522245 ABCA5Q8WWZ7 1642 aa30.29■■■□□ 2.44
PTK2B-215ENST00000522245 SYNJ2O15056 1496 aa30.25■■■□□ 2.43
PTK2B-215ENST00000522245 PBRM1Q86U86 1689 aa30.21■■■□□ 2.43
PTK2B-215ENST00000522245 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
PTK2B-215ENST00000522245 RIMBP3CA6NJZ7 1639 aa30.16■■■□□ 2.42
PTK2B-215ENST00000522245 RIMBP3BA6NNM3 1639 aa30.16■■■□□ 2.42
PTK2B-215ENST00000522245 RIMBP3Q9UFD9 1639 aa30.16■■■□□ 2.42
PTK2B-215ENST00000522245 CLASP1Q7Z460 1538 aa30.06■■■□□ 2.4
PTK2B-215ENST00000522245 FHAD1B1AJZ9 1412 aa30.06■■■□□ 2.4
PTK2B-215ENST00000522245 ERICH3Q5RHP9 1530 aa30.06■■■□□ 2.4
PTK2B-215ENST00000522245 ADAMTS12P58397 1594 aa30.03■■■□□ 2.4
PTK2B-215ENST00000522245 GRIN2AQ12879 1464 aa30.02■■■□□ 2.4
PTK2B-215ENST00000522245 CYB5RLQ6IPT4 315 aa30.02■■■□□ 2.4
PTK2B-215ENST00000522245 KIF27Q86VH2 1401 aa29.96■■■□□ 2.39
PTK2B-215ENST00000522245 ARAP1Q96P48 1450 aa29.93■■■□□ 2.38
PTK2B-215ENST00000522245 NUP160Q12769 1436 aa29.92■■■□□ 2.38
PTK2B-215ENST00000522245 IGF1RP08069 1367 aa29.9■■■□□ 2.38
PTK2B-215ENST00000522245 CEP170Q5SW79 1584 aa29.86■■■□□ 2.37
PTK2B-215ENST00000522245 CARMIL1Q5VZK9 1371 aa29.72■■■□□ 2.35
PTK2B-215ENST00000522245 JPH4Q96JJ6 628 aa29.69■■■□□ 2.34
PTK2B-215ENST00000522245 CUL7Q14999 1698 aa29.68■■■□□ 2.34
PTK2B-215ENST00000522245 ERCC6L2Q5T890 1561 aa29.67■■■□□ 2.34
PTK2B-215ENST00000522245 SHROOM2Q13796 1616 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms