RNA–Protein interactions for RNA: ENST00000522153.1

CD74-207, Transcript of CD74 molecule, humanhuman

TSL 2

Gene CD74, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-207ENST00000522153 NISCHQ9Y2I1 1504 aa32.98■■■□□ 2.87
CD74-207ENST00000522153 CCDC180Q9P1Z9 1646 aa29.48■■■□□ 2.31
CD74-207ENST00000522153 ABCC9O60706 1549 aa28.99■■■□□ 2.23
CD74-207ENST00000522153 RB1CC1Q8TDY2 1594 aa27.81■■■□□ 2.04
CD74-207ENST00000522153 NACADO15069 1562 aa27.73■■■□□ 2.03
CD74-207ENST00000522153 DCAF8L2P0C7V8 631 aa27.55■■■□□ 2
CD74-207ENST00000522153 MYO15BQ96JP2 1530 aa27.5■■□□□ 1.99
CD74-207ENST00000522153 ZCCHC6Q5VYS8 1495 aaKnown RBP27.4■■□□□ 1.98
CD74-207ENST00000522153 UNC13AQ9UPW8 1703 aa27.36■■□□□ 1.97
CD74-207ENST00000522153 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
CD74-207ENST00000522153 BICRAQ9NZM4 1560 aa27.06■■□□□ 1.92
CD74-207ENST00000522153 PABPN1Q86U42 306 aaKnown RBP eCLIP27.05■■□□□ 1.92
CD74-207ENST00000522153 DNAJC5BQ9UF47 199 aa26.94■■□□□ 1.9
CD74-207ENST00000522153 SCRIBQ14160 1630 aa26.81■■□□□ 1.88
CD74-207ENST00000522153 SHROOM4Q9ULL8 1493 aa26.66■■□□□ 1.86
CD74-207ENST00000522153 EIF4G1Q04637 1599 aaKnown RBP26.31■■□□□ 1.8
CD74-207ENST00000522153 CC2D2AQ9P2K1 1620 aa26.28■■□□□ 1.8
CD74-207ENST00000522153 CECR2Q9BXF3 1484 aa26.09■■□□□ 1.77
CD74-207ENST00000522153 SMARCA4P51532 1647 aa25.66■■□□□ 1.7
CD74-207ENST00000522153 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
CD74-207ENST00000522153 ATAD2BQ9ULI0 1458 aa25.55■■□□□ 1.68
CD74-207ENST00000522153 BAZ1AQ9NRL2 1556 aaPredicted RBP25.55■■□□□ 1.68
CD74-207ENST00000522153 SMARCA2P51531 1590 aa25.5■■□□□ 1.67
CD74-207ENST00000522153 HMGXB3Q12766 1538 aa25.44■■□□□ 1.66
CD74-207ENST00000522153 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
CD74-207ENST00000522153 MROH2BQ7Z745 1585 aa25.42■■□□□ 1.66
CD74-207ENST00000522153 BAZ1BQ9UIG0 1483 aaKnown RBP25.29■■□□□ 1.64
CD74-207ENST00000522153 WIZO95785 1651 aa25.17■■□□□ 1.62
CD74-207ENST00000522153 NESP48681 1621 aa25.07■■□□□ 1.6
CD74-207ENST00000522153 RSF1Q96T23 1441 aaPredicted RBP25.02■■□□□ 1.6
CD74-207ENST00000522153 LAMC3Q9Y6N6 1575 aa24.96■■□□□ 1.59
CD74-207ENST00000522153 ERCC6Q03468 1493 aa24.96■■□□□ 1.59
CD74-207ENST00000522153 CUX2O14529 1486 aa24.85■■□□□ 1.57
CD74-207ENST00000522153 KIF21AQ7Z4S6 1674 aa24.83■■□□□ 1.57
CD74-207ENST00000522153 TOP2AP11388 1531 aaKnown RBP24.82■■□□□ 1.56
CD74-207ENST00000522153 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
CD74-207ENST00000522153 THOC2Q8NI27 1593 aaKnown RBP24.76■■□□□ 1.55
CD74-207ENST00000522153 PDS5BQ9NTI5 1447 aa24.74■■□□□ 1.55
CD74-207ENST00000522153 CFTRP13569 1480 aa24.63■■□□□ 1.53
CD74-207ENST00000522153 CCDC88BA6NC98 1476 aa24.55■■□□□ 1.52
CD74-207ENST00000522153 PRDM2Q13029 1718 aa24.54■■□□□ 1.52
CD74-207ENST00000522153 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
CD74-207ENST00000522153 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
CD74-207ENST00000522153 CEP164Q9UPV0 1460 aa24.49■■□□□ 1.51
CD74-207ENST00000522153 WDR62O43379 1518 aa24.48■■□□□ 1.51
CD74-207ENST00000522153 DNAJC5Q9H3Z4 198 aa24.42■■□□□ 1.5
CD74-207ENST00000522153 URB2Q14146 1524 aaKnown RBP24.32■■□□□ 1.48
CD74-207ENST00000522153 TOPBP1Q92547 1522 aa24.11■■□□□ 1.45
CD74-207ENST00000522153 SUPT5HO00267 1087 aaKnown RBP24.11■■□□□ 1.45
CD74-207ENST00000522153 ABCC8Q09428 1581 aa24.08■■□□□ 1.44
CD74-207ENST00000522153 DNMBPQ6XZF7 1577 aa24.07■■□□□ 1.44
CD74-207ENST00000522153 IFT140Q96RY7 1462 aa23.99■■□□□ 1.43
CD74-207ENST00000522153 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
CD74-207ENST00000522153 TARBP1Q13395 1621 aaKnown RBP23.93■■□□□ 1.42
CD74-207ENST00000522153 POLA1P09884 1462 aaPredicted RBP23.89■■□□□ 1.42
CD74-207ENST00000522153 CUX1P39880 1505 aa23.85■■□□□ 1.41
CD74-207ENST00000522153 EIF4G3O43432 1585 aaKnown RBP23.85■■□□□ 1.41
CD74-207ENST00000522153 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
CD74-207ENST00000522153 AQRO60306 1485 aaKnown RBP eCLIP23.78■■□□□ 1.4
CD74-207ENST00000522153 FGD5Q6ZNL6 1462 aa23.78■■□□□ 1.4
CD74-207ENST00000522153 SOGA1O94964 1423 aa23.76■■□□□ 1.39
CD74-207ENST00000522153 OSCARQ8IYS5 282 aa23.76■■□□□ 1.39
CD74-207ENST00000522153 WDR97A6NE52 1622 aa23.69■■□□□ 1.38
CD74-207ENST00000522153 TDRD9Q8NDG6 1382 aaKnown RBP23.66■■□□□ 1.38
CD74-207ENST00000522153 CHD1O14646 1710 aa23.66■■□□□ 1.38
CD74-207ENST00000522153 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
CD74-207ENST00000522153 TOP2BQ02880 1626 aa23.6■■□□□ 1.37
CD74-207ENST00000522153 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
CD74-207ENST00000522153 ABCA10Q8WWZ4 1543 aa23.55■■□□□ 1.36
CD74-207ENST00000522153 WRNQ14191 1432 aaPredicted RBP eCLIP23.55■■□□□ 1.36
CD74-207ENST00000522153 PBRM1Q86U86 1689 aa23.54■■□□□ 1.36
CD74-207ENST00000522153 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
CD74-207ENST00000522153 GRIN2BQ13224 1484 aa23.51■■□□□ 1.35
CD74-207ENST00000522153 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
CD74-207ENST00000522153 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
CD74-207ENST00000522153 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
CD74-207ENST00000522153 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
CD74-207ENST00000522153 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
CD74-207ENST00000522153 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
CD74-207ENST00000522153 FBLN2P98095 1184 aa23.45■■□□□ 1.34
CD74-207ENST00000522153 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
CD74-207ENST00000522153 ARHGEF11O15085 1522 aa23.4■■□□□ 1.34
CD74-207ENST00000522153 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
CD74-207ENST00000522153 CHMP7Q8WUX9 453 aaPredicted RBP23.37■■□□□ 1.33
CD74-207ENST00000522153 CLASP1Q7Z460 1538 aa23.35■■□□□ 1.33
CD74-207ENST00000522153 ADAMTS12P58397 1594 aa23.28■■□□□ 1.32
CD74-207ENST00000522153 ERICH3Q5RHP9 1530 aa23.27■■□□□ 1.32
CD74-207ENST00000522153 GRIN2AQ12879 1464 aa23.23■■□□□ 1.31
CD74-207ENST00000522153 ARAP1Q96P48 1450 aa23.21■■□□□ 1.31
CD74-207ENST00000522153 FHAD1B1AJZ9 1412 aa23.19■■□□□ 1.3
CD74-207ENST00000522153 CYB5RLQ6IPT4 315 aa23.17■■□□□ 1.3
CD74-207ENST00000522153 CEP170Q5SW79 1584 aa23.16■■□□□ 1.3
CD74-207ENST00000522153 NUP160Q12769 1436 aa23.15■■□□□ 1.3
CD74-207ENST00000522153 SHROOM2Q13796 1616 aa23.07■■□□□ 1.28
CD74-207ENST00000522153 IGF1RP08069 1367 aa23.06■■□□□ 1.28
CD74-207ENST00000522153 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
CD74-207ENST00000522153 ERCC6L2Q5T890 1561 aa23.03■■□□□ 1.28
CD74-207ENST00000522153 CUL7Q14999 1698 aa23.02■■□□□ 1.28
CD74-207ENST00000522153 RUSC2Q8N2Y8 1516 aa22.95■■□□□ 1.26
CD74-207ENST00000522153 JPH4Q96JJ6 628 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms