RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 NISCHQ9Y2I1 1504 aa45.69■■■■■ 4.9
TOP1MT-216ENST00000522121 CCDC180Q9P1Z9 1646 aa40.85■■■■■ 4.13
TOP1MT-216ENST00000522121 ABCC9O60706 1549 aa40.62■■■■■ 4.09
TOP1MT-216ENST00000522121 RB1CC1Q8TDY2 1594 aa38.81■■■■□ 3.8
TOP1MT-216ENST00000522121 NACADO15069 1562 aa38.61■■■■□ 3.77
TOP1MT-216ENST00000522121 DCAF8L2P0C7V8 631 aa38.55■■■■□ 3.76
TOP1MT-216ENST00000522121 MYO15BQ96JP2 1530 aa38.17■■■■□ 3.7
TOP1MT-216ENST00000522121 ZCCHC6Q5VYS8 1495 aaKnown RBP37.91■■■■□ 3.66
TOP1MT-216ENST00000522121 PABPN1Q86U42 306 aaKnown RBP eCLIP37.9■■■■□ 3.66
TOP1MT-216ENST00000522121 DNAJC5BQ9UF47 199 aa37.84■■■■□ 3.65
TOP1MT-216ENST00000522121 UNC13AQ9UPW8 1703 aa37.79■■■■□ 3.64
TOP1MT-216ENST00000522121 DCAF1Q9Y4B6 1507 aa37.77■■■■□ 3.64
TOP1MT-216ENST00000522121 BICRAQ9NZM4 1560 aa37.59■■■■□ 3.61
TOP1MT-216ENST00000522121 SCRIBQ14160 1630 aa37.25■■■■□ 3.55
TOP1MT-216ENST00000522121 SHROOM4Q9ULL8 1493 aa37.21■■■■□ 3.55
TOP1MT-216ENST00000522121 CC2D2AQ9P2K1 1620 aa36.69■■■■□ 3.46
TOP1MT-216ENST00000522121 EIF4G1Q04637 1599 aaKnown RBP36.69■■■■□ 3.46
TOP1MT-216ENST00000522121 CECR2Q9BXF3 1484 aa36.59■■■■□ 3.45
TOP1MT-216ENST00000522121 NCAPD3P42695 1498 aa35.65■■■■□ 3.3
TOP1MT-216ENST00000522121 ATAD2BQ9ULI0 1458 aa35.56■■■■□ 3.28
TOP1MT-216ENST00000522121 SMARCA4P51532 1647 aa35.56■■■■□ 3.28
TOP1MT-216ENST00000522121 SMARCA2P51531 1590 aa35.5■■■■□ 3.27
TOP1MT-216ENST00000522121 BAZ1AQ9NRL2 1556 aaPredicted RBP35.47■■■■□ 3.27
TOP1MT-216ENST00000522121 HMGXB3Q12766 1538 aa35.39■■■■□ 3.26
TOP1MT-216ENST00000522121 BAZ1BQ9UIG0 1483 aaKnown RBP35.25■■■■□ 3.23
TOP1MT-216ENST00000522121 PEG3Q9GZU2 1588 aa35.21■■■■□ 3.23
TOP1MT-216ENST00000522121 MROH2BQ7Z745 1585 aa35.19■■■■□ 3.22
TOP1MT-216ENST00000522121 ERCC6Q03468 1493 aa35.11■■■■□ 3.21
TOP1MT-216ENST00000522121 NESP48681 1621 aa34.95■■■■□ 3.19
TOP1MT-216ENST00000522121 CUX2O14529 1486 aa34.93■■■■□ 3.18
TOP1MT-216ENST00000522121 LAMC3Q9Y6N6 1575 aa34.79■■■■□ 3.16
TOP1MT-216ENST00000522121 WIZO95785 1651 aa34.76■■■■□ 3.15
TOP1MT-216ENST00000522121 PDS5BQ9NTI5 1447 aa34.64■■■■□ 3.14
TOP1MT-216ENST00000522121 DNAJC5Q9H3Z4 198 aa34.61■■■■□ 3.13
TOP1MT-216ENST00000522121 CADPSQ9ULU8 1353 aa34.6■■■■□ 3.13
TOP1MT-216ENST00000522121 RSF1Q96T23 1441 aaPredicted RBP34.59■■■■□ 3.13
TOP1MT-216ENST00000522121 THOC2Q8NI27 1593 aaKnown RBP34.52■■■■□ 3.12
TOP1MT-216ENST00000522121 KIF21AQ7Z4S6 1674 aa34.47■■■■□ 3.11
TOP1MT-216ENST00000522121 TOP2AP11388 1531 aaKnown RBP34.39■■■■□ 3.1
TOP1MT-216ENST00000522121 MRC2Q9UBG0 1479 aa34.27■■■■□ 3.08
TOP1MT-216ENST00000522121 CFTRP13569 1480 aa34.23■■■■□ 3.07
TOP1MT-216ENST00000522121 CEP164Q9UPV0 1460 aa34.2■■■■□ 3.07
TOP1MT-216ENST00000522121 FANCD2Q9BXW9 1451 aa34.19■■■■□ 3.06
TOP1MT-216ENST00000522121 WDR62O43379 1518 aa34.14■■■■□ 3.06
TOP1MT-216ENST00000522121 CCDC88BA6NC98 1476 aa34■■■■□ 3.03
TOP1MT-216ENST00000522121 URB2Q14146 1524 aaKnown RBP33.85■■■■□ 3.01
TOP1MT-216ENST00000522121 PRDM2Q13029 1718 aa33.82■■■■□ 3
TOP1MT-216ENST00000522121 ABCC8Q09428 1581 aa33.55■■■□□ 2.96
TOP1MT-216ENST00000522121 TOPBP1Q92547 1522 aa33.54■■■□□ 2.96
TOP1MT-216ENST00000522121 IFT140Q96RY7 1462 aa33.52■■■□□ 2.96
TOP1MT-216ENST00000522121 DNMBPQ6XZF7 1577 aa33.45■■■□□ 2.95
TOP1MT-216ENST00000522121 OSCARQ8IYS5 282 aa33.44■■■□□ 2.94
TOP1MT-216ENST00000522121 ZNF608Q9ULD9 1512 aaPredicted RBP33.38■■■□□ 2.93
TOP1MT-216ENST00000522121 SUPT5HO00267 1087 aaKnown RBP33.33■■■□□ 2.93
TOP1MT-216ENST00000522121 TRIM41Q8WV44 630 aa33.24■■■□□ 2.91
TOP1MT-216ENST00000522121 POLA1P09884 1462 aaPredicted RBP33.22■■■□□ 2.91
TOP1MT-216ENST00000522121 EIF4G3O43432 1585 aaKnown RBP33.21■■■□□ 2.91
TOP1MT-216ENST00000522121 TARBP1Q13395 1621 aaKnown RBP33.19■■■□□ 2.9
TOP1MT-216ENST00000522121 AQRO60306 1485 aaKnown RBP eCLIP33.15■■■□□ 2.9
TOP1MT-216ENST00000522121 SOGA1O94964 1423 aa33.12■■■□□ 2.89
TOP1MT-216ENST00000522121 RAD54L2Q9Y4B4 1467 aa33.09■■■□□ 2.89
TOP1MT-216ENST00000522121 FGD5Q6ZNL6 1462 aa33.05■■■□□ 2.88
TOP1MT-216ENST00000522121 CUX1P39880 1505 aa33.05■■■□□ 2.88
TOP1MT-216ENST00000522121 TDRD9Q8NDG6 1382 aaKnown RBP33.01■■■□□ 2.88
TOP1MT-216ENST00000522121 FBLN2P98095 1184 aa32.96■■■□□ 2.87
TOP1MT-216ENST00000522121 WDR97A6NE52 1622 aa32.92■■■□□ 2.86
TOP1MT-216ENST00000522121 CHD1O14646 1710 aa32.88■■■□□ 2.85
TOP1MT-216ENST00000522121 RIMBP3CA6NJZ7 1639 aa32.87■■■□□ 2.85
TOP1MT-216ENST00000522121 RIMBP3BA6NNM3 1639 aa32.87■■■□□ 2.85
TOP1MT-216ENST00000522121 RIMBP3Q9UFD9 1639 aa32.87■■■□□ 2.85
TOP1MT-216ENST00000522121 SNAPC4Q5SXM2 1469 aa32.82■■■□□ 2.84
TOP1MT-216ENST00000522121 ARHGEF11O15085 1522 aa32.82■■■□□ 2.84
TOP1MT-216ENST00000522121 GRIN2BQ13224 1484 aa32.8■■■□□ 2.84
TOP1MT-216ENST00000522121 MAGI1Q96QZ7 1491 aaPredicted RBP32.76■■■□□ 2.84
TOP1MT-216ENST00000522121 CHMP7Q8WUX9 453 aaPredicted RBP32.76■■■□□ 2.83
TOP1MT-216ENST00000522121 GAPVD1Q14C86 1478 aa32.71■■■□□ 2.83
TOP1MT-216ENST00000522121 ABCA10Q8WWZ4 1543 aa32.71■■■□□ 2.83
TOP1MT-216ENST00000522121 WRNQ14191 1432 aaPredicted RBP eCLIP32.68■■■□□ 2.82
TOP1MT-216ENST00000522121 SYNJ2O15056 1496 aa32.65■■■□□ 2.82
TOP1MT-216ENST00000522121 CYB5RLQ6IPT4 315 aa32.62■■■□□ 2.81
TOP1MT-216ENST00000522121 TOP2BQ02880 1626 aa32.61■■■□□ 2.81
TOP1MT-216ENST00000522121 SYNJ1O43426 1573 aa32.6■■■□□ 2.81
TOP1MT-216ENST00000522121 PBRM1Q86U86 1689 aa32.59■■■□□ 2.81
TOP1MT-216ENST00000522121 ABCA5Q8WWZ7 1642 aa32.59■■■□□ 2.81
TOP1MT-216ENST00000522121 BIVM-ERCC5R4GMW8 1640 aa32.58■■■□□ 2.81
TOP1MT-216ENST00000522121 CLASP1Q7Z460 1538 aa32.54■■■□□ 2.8
TOP1MT-216ENST00000522121 ARAP1Q96P48 1450 aa32.5■■■□□ 2.79
TOP1MT-216ENST00000522121 GRIN2AQ12879 1464 aa32.35■■■□□ 2.77
TOP1MT-216ENST00000522121 ADAMTS12P58397 1594 aa32.33■■■□□ 2.77
TOP1MT-216ENST00000522121 FHAD1B1AJZ9 1412 aa32.32■■■□□ 2.76
TOP1MT-216ENST00000522121 ERICH3Q5RHP9 1530 aa32.31■■■□□ 2.76
TOP1MT-216ENST00000522121 NUP160Q12769 1436 aa32.23■■■□□ 2.75
TOP1MT-216ENST00000522121 TRHP20396 242 aaPredicted RBP32.21■■■□□ 2.75
TOP1MT-216ENST00000522121 CEP170Q5SW79 1584 aa32.18■■■□□ 2.74
TOP1MT-216ENST00000522121 KIF27Q86VH2 1401 aa32.04■■■□□ 2.72
TOP1MT-216ENST00000522121 ERCC6L2Q5T890 1561 aa32.02■■■□□ 2.72
TOP1MT-216ENST00000522121 SHROOM2Q13796 1616 aa32.01■■■□□ 2.72
TOP1MT-216ENST00000522121 IGF1RP08069 1367 aa31.97■■■□□ 2.71
TOP1MT-216ENST00000522121 JPH4Q96JJ6 628 aa31.95■■■□□ 2.71
TOP1MT-216ENST00000522121 PRG4Q92954 1404 aaPredicted RBP31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms