RNA–Protein interactions for RNA: ENST00000522039.1

HR-208, Transcript of HR, lysine demethylase and nuclear receptor corepressor, humanhuman

TSL 4

Gene HR, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HR-208ENST00000522039 NISCHQ9Y2I1 1504 aa42.68■■■■■ 4.42
HR-208ENST00000522039 CCDC180Q9P1Z9 1646 aa38.19■■■■□ 3.7
HR-208ENST00000522039 ABCC9O60706 1549 aa37.38■■■■□ 3.57
HR-208ENST00000522039 RB1CC1Q8TDY2 1594 aa35.99■■■■□ 3.35
HR-208ENST00000522039 NACADO15069 1562 aa35.89■■■■□ 3.34
HR-208ENST00000522039 MYO15BQ96JP2 1530 aa35.63■■■■□ 3.29
HR-208ENST00000522039 DCAF8L2P0C7V8 631 aa35.57■■■■□ 3.28
HR-208ENST00000522039 ZCCHC6Q5VYS8 1495 aaKnown RBP35.54■■■■□ 3.28
HR-208ENST00000522039 DCAF1Q9Y4B6 1507 aa35.38■■■■□ 3.25
HR-208ENST00000522039 UNC13AQ9UPW8 1703 aa35.18■■■■□ 3.22
HR-208ENST00000522039 BICRAQ9NZM4 1560 aa34.84■■■■□ 3.17
HR-208ENST00000522039 PABPN1Q86U42 306 aaKnown RBP eCLIP34.79■■■■□ 3.16
HR-208ENST00000522039 SCRIBQ14160 1630 aa34.7■■■■□ 3.14
HR-208ENST00000522039 SHROOM4Q9ULL8 1493 aa34.59■■■■□ 3.13
HR-208ENST00000522039 DNAJC5BQ9UF47 199 aa34.39■■■■□ 3.1
HR-208ENST00000522039 EIF4G1Q04637 1599 aaKnown RBP33.97■■■■□ 3.03
HR-208ENST00000522039 CC2D2AQ9P2K1 1620 aa33.87■■■■□ 3.01
HR-208ENST00000522039 CECR2Q9BXF3 1484 aa33.64■■■□□ 2.98
HR-208ENST00000522039 SMARCA4P51532 1647 aa33.2■■■□□ 2.91
HR-208ENST00000522039 BAZ1AQ9NRL2 1556 aaPredicted RBP33.15■■■□□ 2.9
HR-208ENST00000522039 NCAPD3P42695 1498 aa33.05■■■□□ 2.88
HR-208ENST00000522039 SMARCA2P51531 1590 aa33.05■■■□□ 2.88
HR-208ENST00000522039 ATAD2BQ9ULI0 1458 aa33.03■■■□□ 2.88
HR-208ENST00000522039 HMGXB3Q12766 1538 aa32.95■■■□□ 2.87
HR-208ENST00000522039 PEG3Q9GZU2 1588 aa32.92■■■□□ 2.86
HR-208ENST00000522039 MROH2BQ7Z745 1585 aa32.85■■■□□ 2.85
HR-208ENST00000522039 BAZ1BQ9UIG0 1483 aaKnown RBP32.77■■■□□ 2.84
HR-208ENST00000522039 WIZO95785 1651 aa32.51■■■□□ 2.79
HR-208ENST00000522039 RSF1Q96T23 1441 aaPredicted RBP32.38■■■□□ 2.77
HR-208ENST00000522039 LAMC3Q9Y6N6 1575 aa32.29■■■□□ 2.76
HR-208ENST00000522039 ERCC6Q03468 1493 aa32.29■■■□□ 2.76
HR-208ENST00000522039 NESP48681 1621 aa32.27■■■□□ 2.76
HR-208ENST00000522039 TOP2AP11388 1531 aaKnown RBP32.21■■■□□ 2.75
HR-208ENST00000522039 CUX2O14529 1486 aa32.09■■■□□ 2.73
HR-208ENST00000522039 CADPSQ9ULU8 1353 aa32.05■■■□□ 2.72
HR-208ENST00000522039 PDS5BQ9NTI5 1447 aa32.02■■■□□ 2.72
HR-208ENST00000522039 KIF21AQ7Z4S6 1674 aa31.99■■■□□ 2.71
HR-208ENST00000522039 THOC2Q8NI27 1593 aaKnown RBP31.94■■■□□ 2.7
HR-208ENST00000522039 CFTRP13569 1480 aa31.84■■■□□ 2.69
HR-208ENST00000522039 CCDC88BA6NC98 1476 aa31.74■■■□□ 2.67
HR-208ENST00000522039 PRDM2Q13029 1718 aa31.74■■■□□ 2.67
HR-208ENST00000522039 CEP164Q9UPV0 1460 aa31.72■■■□□ 2.67
HR-208ENST00000522039 MRC2Q9UBG0 1479 aa31.72■■■□□ 2.67
HR-208ENST00000522039 FANCD2Q9BXW9 1451 aa31.71■■■□□ 2.67
HR-208ENST00000522039 WDR62O43379 1518 aa31.65■■■□□ 2.66
HR-208ENST00000522039 URB2Q14146 1524 aaKnown RBP31.39■■■□□ 2.62
HR-208ENST00000522039 SUPT5HO00267 1087 aaKnown RBP31.28■■■□□ 2.6
HR-208ENST00000522039 DNAJC5Q9H3Z4 198 aa31.23■■■□□ 2.59
HR-208ENST00000522039 ABCC8Q09428 1581 aa31.22■■■□□ 2.59
HR-208ENST00000522039 TOPBP1Q92547 1522 aa31.19■■■□□ 2.58
HR-208ENST00000522039 DNMBPQ6XZF7 1577 aa31.17■■■□□ 2.58
HR-208ENST00000522039 IFT140Q96RY7 1462 aa31.07■■■□□ 2.56
HR-208ENST00000522039 TARBP1Q13395 1621 aaKnown RBP30.9■■■□□ 2.54
HR-208ENST00000522039 POLA1P09884 1462 aaPredicted RBP30.89■■■□□ 2.54
HR-208ENST00000522039 ZNF608Q9ULD9 1512 aaPredicted RBP30.87■■■□□ 2.53
HR-208ENST00000522039 CUX1P39880 1505 aa30.85■■■□□ 2.53
HR-208ENST00000522039 EIF4G3O43432 1585 aaKnown RBP30.84■■■□□ 2.53
HR-208ENST00000522039 FGD5Q6ZNL6 1462 aa30.79■■■□□ 2.52
HR-208ENST00000522039 WDR97A6NE52 1622 aa30.74■■■□□ 2.51
HR-208ENST00000522039 SOGA1O94964 1423 aa30.73■■■□□ 2.51
HR-208ENST00000522039 RAD54L2Q9Y4B4 1467 aa30.7■■■□□ 2.5
HR-208ENST00000522039 AQRO60306 1485 aaKnown RBP eCLIP30.64■■■□□ 2.5
HR-208ENST00000522039 BIVM-ERCC5R4GMW8 1640 aa30.62■■■□□ 2.49
HR-208ENST00000522039 OSCARQ8IYS5 282 aa30.6■■■□□ 2.49
HR-208ENST00000522039 TOP2BQ02880 1626 aa30.58■■■□□ 2.49
HR-208ENST00000522039 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
HR-208ENST00000522039 TDRD9Q8NDG6 1382 aaKnown RBP30.54■■■□□ 2.48
HR-208ENST00000522039 SYNJ1O43426 1573 aa30.52■■■□□ 2.48
HR-208ENST00000522039 ABCA10Q8WWZ4 1543 aa30.51■■■□□ 2.47
HR-208ENST00000522039 CHD1O14646 1710 aa30.5■■■□□ 2.47
HR-208ENST00000522039 GRIN2BQ13224 1484 aa30.45■■■□□ 2.47
HR-208ENST00000522039 ABCA5Q8WWZ7 1642 aa30.45■■■□□ 2.47
HR-208ENST00000522039 PBRM1Q86U86 1689 aa30.45■■■□□ 2.46
HR-208ENST00000522039 MAGI1Q96QZ7 1491 aaPredicted RBP30.43■■■□□ 2.46
HR-208ENST00000522039 SNAPC4Q5SXM2 1469 aa30.42■■■□□ 2.46
HR-208ENST00000522039 GAPVD1Q14C86 1478 aa30.41■■■□□ 2.46
HR-208ENST00000522039 SYNJ2O15056 1496 aa30.29■■■□□ 2.44
HR-208ENST00000522039 FBLN2P98095 1184 aa30.28■■■□□ 2.44
HR-208ENST00000522039 RIMBP3CA6NJZ7 1639 aa30.22■■■□□ 2.43
HR-208ENST00000522039 RIMBP3BA6NNM3 1639 aa30.22■■■□□ 2.43
HR-208ENST00000522039 RIMBP3Q9UFD9 1639 aa30.22■■■□□ 2.43
HR-208ENST00000522039 CHMP7Q8WUX9 453 aaPredicted RBP30.21■■■□□ 2.43
HR-208ENST00000522039 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
HR-208ENST00000522039 ERICH3Q5RHP9 1530 aa30.17■■■□□ 2.42
HR-208ENST00000522039 ADAMTS12P58397 1594 aa30.16■■■□□ 2.42
HR-208ENST00000522039 CLASP1Q7Z460 1538 aa30.15■■■□□ 2.42
HR-208ENST00000522039 GRIN2AQ12879 1464 aa30.06■■■□□ 2.4
HR-208ENST00000522039 FHAD1B1AJZ9 1412 aa30.06■■■□□ 2.4
HR-208ENST00000522039 TRIM41Q8WV44 630 aa30.06■■■□□ 2.4
HR-208ENST00000522039 KIF27Q86VH2 1401 aa29.96■■■□□ 2.39
HR-208ENST00000522039 NUP160Q12769 1436 aa29.93■■■□□ 2.38
HR-208ENST00000522039 CEP170Q5SW79 1584 aa29.92■■■□□ 2.38
HR-208ENST00000522039 CUL7Q14999 1698 aa29.9■■■□□ 2.38
HR-208ENST00000522039 ARAP1Q96P48 1450 aa29.89■■■□□ 2.38
HR-208ENST00000522039 IGF1RP08069 1367 aa29.79■■■□□ 2.36
HR-208ENST00000522039 SHROOM2Q13796 1616 aa29.79■■■□□ 2.36
HR-208ENST00000522039 CYB5RLQ6IPT4 315 aa29.79■■■□□ 2.36
HR-208ENST00000522039 RUSC2Q8N2Y8 1516 aa29.74■■■□□ 2.35
HR-208ENST00000522039 ERCC6L2Q5T890 1561 aa29.64■■■□□ 2.33
HR-208ENST00000522039 CARMIL1Q5VZK9 1371 aa29.64■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms